Microwave fidelity studies by varying antenna coupling

The fidelity decay in a microwave billiard is considered, where the coupling to an attached antenna is varied. The resulting quantity, coupling fidelity, is experimentally studied for three different terminators of the varied antenna: a hard wall reflection, an open wall reflection, and a 50 Ohm load, corresponding to a totally open channel. The model description in terms of an effective Hamiltonian with a complex coupling constant is given. Quantitative agreement is found with the theory obtained from a modified VWZ approach [Verbaarschot et al, Phys. Rep. 129, 367 (1985)].Comment: 9 pages 5 figur

Molecular gyroscopes and biological effects of weak ELF magnetic fields

Extremely-low-frequency magnetic fields are known to affect biological systems. In many cases, biological effects display `windows' in biologically effective parameters of the magnetic fields: most dramatic is the fact that relatively intense magnetic fields sometimes do not cause appreciable effect, while smaller fields of the order of 10--100 $\mu$T do. Linear resonant physical processes do not explain frequency windows in this case. Amplitude window phenomena suggest a nonlinear physical mechanism. Such a nonlinear mechanism has been proposed recently to explain those `windows'. It considers quantum-interference effects on protein-bound substrate ions. Magnetic fields cause an interference of ion quantum states and change the probability of ion-protein dissociation. This ion-interference mechanism predicts specific magnetic-field frequency and amplitude windows within which biological effects occur. It agrees with a lot of experiments. However, according to the mechanism, the lifetime $\Gamma^{-1}$ of ion quantum states within a protein cavity should be of unrealistic value, more than 0.01 s for frequency band 10--100 Hz. In this paper, a biophysical mechanism has been proposed that (i) retains the attractive features of the ion interference mechanism and (ii) uses the principles of gyroscopic motion and removes the necessity to postulate large lifetimes. The mechanism considers dynamics of the density matrix of the molecular groups, which are attached to the walls of protein cavities by two covalent bonds, i.e., molecular gyroscopes. Numerical computations have shown almost free rotations of the molecular gyros. The relaxation time due to van der Waals forces was about 0.01 s for the cavity size of 28 angstr\"{o}ms.Comment: 10 pages, 7 figure

The Diffusion of the Magnetization Profile in the XX-model

By the $C^*$-algebraic method, we investigate the magnetization profile in the intermediate time of diffusion. We observe a transition from monotone profile to non-monotone profile. This transition is purely thermal.Comment: Accepted for publication in Phys. Rev.

Random matrix description of decaying quantum systems

This contribution describes a statistical model for decaying quantum systems (e.g. photo-dissociation or -ionization). It takes the interference between direct and indirect decay processes explicitely into account. The resulting expressions for the partial decay amplitudes and the corresponding cross sections may be considered a many-channel many-resonance generalization of Fano's original work on resonance lineshapes [Phys. Rev 124, 1866 (1961)]. A statistical (random matrix) model is then introduced. It allows to describe chaotic scattering systems with tunable couplings to the decay channels. We focus on the autocorrelation function of the total (photo) cross section, and we find that it depends on the same combination of parameters, as the Fano-parameter distribution. These combinations are statistical variants of the one-channel Fano parameter. It is thus possible to study Fano interference (i.e. the interference between direct and indirect decay paths) on the basis of the autocorrelation function, and thereby in the regime of overlapping resonances. It allows us, to study the Fano interference in the limit of strongly overlapping resonances, where we find a persisting effect on the level of the weak localization correction.Comment: 16 pages, 2 figure

Heat conduction in 1D lattices with on-site potential

The process of heat conduction in one-dimensional lattice with on-site potential is studied by means of numerical simulation. Using discrete Frenkel-Kontorova, $\phi$--4 and sinh-Gordon we demonstrate that contrary to previously expressed opinions the sole anharmonicity of the on-site potential is insufficient to ensure the normal heat conductivity in these systems. The character of the heat conduction is determined by the spectrum of nonlinear excitations peculiar for every given model and therefore depends on the concrete potential shape and temperature of the lattice. The reason is that the peculiarities of the nonlinear excitations and their interactions prescribe the energy scattering mechanism in each model. For models sin-Gordon and $\phi$--4 phonons are scattered at thermalized lattice of topological solitons; for sinh-Gordon and $\phi$--4 - models the phonons are scattered at localized high-frequency breathers (in the case of $\phi$--4 the scattering mechanism switches with the growth of the temperature).Comment: 26 pages, 18 figure

On the nonlinear dynamics of topological solitons in DNA

Dynamics of topological solitons describing open states in the DNA double helix are studied in the frameworks of the model which takes into account asymmetry of the helix. It is shown that three types of topological solitons can occur in the DNA double chain. Interaction between the solitons, their interactions with the chain inhomogeneities and stability of the solitons with respect to thermal oscillations are investigated.Comment: 16 pages, 16 figure

Heat conductivity of DNA double helix

Thermal conductivity of isolated single molecule DNA fragments is of importance for nanotechnology, but has not yet been measured experimentally. Theoretical estimates based on simplified (1D) models predict anomalously high thermal conductivity. To investigate thermal properties of single molecule DNA we have developed a 3D coarse-grained (CG) model that retains the realism of the full all-atom description, but is significantly more efficient. Within the proposed model each nucleotide is represented by 6 particles or grains; the grains interact via effective potentials inferred from classical molecular dynamics (MD) trajectories based on a well-established all-atom potential function. Comparisons of 10 ns long MD trajectories between the CG and the corresponding all-atom model show similar root-mean-square deviations from the canonical B-form DNA, and similar structural fluctuations. At the same time, the CG model is 10 to 100 times faster depending on the length of the DNA fragment in the simulation. Analysis of dispersion curves derived from the CG model yields longitudinal sound velocity and torsional stiffness in close agreement with existing experiments. The computational efficiency of the CG model makes it possible to calculate thermal conductivity of a single DNA molecule not yet available experimentally. For a uniform (polyG-polyC) DNA, the estimated conductivity coefficient is 0.3 W/mK which is half the value of thermal conductivity for water. This result is in stark contrast with estimates of thermal conductivity for simplified, effectively 1D chains ("beads on a spring") that predict anomalous (infinite) thermal conductivity. Thus, full 3D character of DNA double-helix retained in the proposed model appears to be essential for describing its thermal properties at a single molecule level.Comment: 16 pages, 12 figure

Interfering Doorway States and Giant Resonances. II: Transition Strengths

The mixing of the doorway components of a giant resonance (GR) due to the interaction via common decay channels influences significantly the distribution of the multipole strength and the energy spectrum of the decay products of the GR. The concept of the partial widths of a GR becomes ambiguous when the mixing is strong. In this case, the partial widths determined in terms of the $K$- and $S$-matrices must be distinguished. The photoemission turns out to be most sensitive to the overlapping of the doorway states. At high excitation energies, the interference between the doorway states leads to a restructuring towards lower energies and apparent quenching of the dipole strength.Comment: 17 pages, LaTeX, 5 figures as JPEG, to appear in PRC (July 1997

Supersonic Discrete Kink-Solitons and Sinusoidal Patterns with "Magic" wavenumber in Anharmonic Lattices

The sharp pulse method is applied to Fermi-Pasta-Ulam (FPU) and Lennard-Jones (LJ) anharmonic lattices. Numerical simulations reveal the presence of high energy strongly localized ``discrete'' kink-solitons (DK), which move with supersonic velocities that are proportional to kink amplitudes. For small amplitudes, the DK's of the FPU lattice reduce to the well-known ``continuous'' kink-soliton solutions of the modified Korteweg-de Vries equation. For high amplitudes, we obtain a consistent description of these DK's in terms of approximate solutions of the lattice equations that are obtained by restricting to a bounded support in space exact solutions with sinusoidal pattern characterized by the ``magic'' wavenumber $k=2\pi/3$. Relative displacement patterns, velocity versus amplitude, dispersion relation and exponential tails found in numerical simulations are shown to agree very well with analytical predictions, for both FPU and LJ lattices.Comment: Europhysics Letters (in print