Legal and ethical issues around incorporating traditional knowledge in polar data infrastructures

Human knowledge of the polar region is a unique blend of Western scientific knowledge and local and indigenous knowledge. It is increasingly recognized that to exclude Traditional Knowledge from repositories of polar data would both limit the value of such repositories and perpetuate colonial legacies of exclusion and exploitation. However, the inclusion of Traditional Knowledge within repositories that are conceived and designed for Western scientific knowledge raises its own unique challenges. There is increasing acceptance of the need to make these two knowledge systems interoperable but in addition to the technical challenge there are legal and ethical issues involved. These relate to 'ownership' or custodianship of the knowledge; obtaining appropriate consent to gather, use and incorporate this knowledge; being sensitive to potentially different norms regarding access to and sharing of some types of knowledge; and appropriate acknowledgement for data contributors. In some cases, respectful incorporation of Traditional Knowledge may challenge standard conceptions regarding the sharing of data, including through open data licensing. These issues have not been fully addressed in the existing literature on legal interoperability which does not adequately deal with Traditional Knowledge. In this paper we identify legal and ethical norms regarding the use of Traditional Knowledge and explore their application in the particular context of polar data. Drawing upon our earlier work on cybercartography and Traditional Knowledge we identify the elements required in the development of a framework for the inclusion of Traditional Knowledge within data infrastructures

E2F1-Mediated Upregulation of p19INK4d Determines Its Periodic Expression during Cell Cycle and Regulates Cellular Proliferation

BACKGROUND: A central aspect of development and disease is the control of cell proliferation through regulation of the mitotic cycle. Cell cycle progression and directionality requires an appropriate balance of positive and negative regulators whose expression must fluctuate in a coordinated manner. p19INK4d, a member of the INK4 family of CDK inhibitors, has a unique feature that distinguishes it from the remaining INK4 and makes it a likely candidate for contributing to the directionality of the cell cycle. p19INK4d mRNA and protein levels accumulate periodically during the cell cycle under normal conditions, a feature reminiscent of cyclins. METHODOLOGY/PRINCIPAL FINDINGS: In this paper, we demonstrate that p19INK4d is transcriptionally regulated by E2F1 through two response elements present in the p19INK4d promoter. Ablation of this regulation reduced p19 levels and restricted its expression during the cell cycle, reflecting the contribution of a transcriptional effect of E2F1 on p19 periodicity. The induction of p19INK4d is delayed during the cell cycle compared to that of cyclin E, temporally separating the induction of these proliferative and antiproliferative target genes. Specific inhibition of the E2F1-p19INK4d pathway using triplex-forming oligonucleotides that block E2F1 binding on p19 promoter, stimulated cell proliferation and increased the fraction of cells in S phase. CONCLUSIONS/SIGNIFICANCE: The results described here support a model of normal cell cycle progression in which, following phosphorylation of pRb, free E2F induces cyclin E, among other target genes. Once cyclinE/CDK2 takes over as the cell cycle driving kinase activity, the induction of p19 mediated by E2F1 leads to inhibition of the CDK4,6-containing complexes, bringing the G1 phase to an end. This regulatory mechanism constitutes a new negative feedback loop that terminates the G1 phase proliferative signal, contributing to the proper coordination of the cell cycle and provides an additional mechanism to limit E2F activity

The Canadian consortium for arctic data interoperability : an emerging polar information network

Established in 2015, the Canadian Consortium for Arctic Data Interoperability (CCADI) is an emerging initiative to develop an integrated Canadian arctic data anagement system that will facilitate information discovery, establish metadata and data sharing standards, enable interoperability among existing data infrastructures, and that will be accessible to a broad audience of users. Key to the CCADI vision are: standards and mechanisms for metadata interoperability and semantic interoperability; a distributed data exchange platform; streamlined data services with common entry, access, search, match, analysis, visualization and output tools; an intellectual property and sensitive data service; and data stewardship capacity. This will be a particularly challenging set of tasks given that the data planned for inclusion is multidisciplinary, in multiple types that range from sensor data to material artifacts, and, in some cases, confidential.publishedVersio

CDK2 and PKA Mediated-Sequential Phosphorylation Is Critical for p19INK4d Function in the DNA Damage Response

DNA damage triggers a phosphorylation-based signaling cascade known as the DNA damage response. p19INK4d, a member of the INK4 family of CDK4/6 inhibitors, has been reported to participate in the DNA damage response promoting DNA repair and cell survival. Here, we provide mechanistic insight into the activation mechanism of p19INK4d linked to the response to DNA damage. Results showed that p19INK4d becomes phosphorylated following UV radiation, β-amyloid peptide and cisplatin treatments. ATM-Chk2/ATR-Chk1 signaling pathways were found to be differentially involved in p19INK4d phosphorylation depending on the type of DNA damage. Two sequential phosphorylation events at serine 76 and threonine 141 were identified using p19INK4d single-point mutants in metabolic labeling assays with 32P-orthophosphate. CDK2 and PKA were found to participate in p19INK4d phosphorylation process and that they would mediate serine 76 and threonine 141 modifications respectively. Nuclear translocation of p19INK4d induced by DNA damage was shown to be dependent on serine 76 phosphorylation. Most importantly, both phosphorylation sites were found to be crucial for p19INK4d function in DNA repair and cell survival. In contrast, serine 76 and threonine 141 were dispensable for CDK4/6 inhibition highlighting the independence of p19INK4d functions, in agreement with our previous findings. These results constitute the first description of the activation mechanism of p19INK4d in response to genotoxic stress and demonstrate the functional relevance of this activation following DNA damage

Issues in Open Data: Privacy

Chapter 23 in the book The State of Open Data: Histories and Horizons

Cybercartography and traditional knowledge: Responding to legal and ethical challenges

Cybercartography offers rich potential for the mapping of traditional knowledge (TK). At the same time, the particular characteristics of TK pose significant challenges for cybercartographers. TK is more than a collection of informational ‘artifacts’ that can be placed on a map; it forms part of a knowledge system that is often fundamentally different from dominant Western systems. These differences require new paradigms for thinking about maps and the

Mapping traditional knowledge: Digital cartography in the Canadian north

Digital cartography offers exciting opportunities for recording indigenous knowledge, particularly in contexts where a people's relationship to the land has high cultural significance. Canada's north offers a useful case study of both the opportunities and challenges of such projects. Through the Geomatics and Cartographic Research Centre (GCRC), Inuit peoples have been invited to become partners in innovative digital mapping projects, including creating atlases of traditional place names, recording the patterns and movement of sea ice, and recording previously uncharted and often shifting traditional routes over ice and tundra. Such projects have generated interest in local communities because of their potential to record and preserve traditional knowledge and because they offer an attractive visual and multimedia interface that can address linguistic and cultural concerns. But given corporations' growing interest in the natural resourc

Legal issues in mapping traditional knowledge: Digital cartography in the canadian north

Digital cartography offers great potential for mapping the traditional knowledge of indigenous communities. This is particularly so because of the close relationship between such knowledge and traditional lands. Yet the mapping of traditional knowledge also raises distinct legal and ethical considerations which should be at the forefront in the design and implementation of indigenous digital cartography projects. This paper examines these considerations through the lens of digital atlases jointly created by Inuit communities and Carleton University’s Geomatics and Cartographic Research Centre (GCRC)