QTL analysis for yield-related traits under different water regimes in maize

Drought is one of the most essential factors influencing maize yield. Improving maize varieties with drought tolerance by using marker-assisted or genomic selection requires more understanding of the genetic basis of yield-related traits under different water regimes. In the present study, 213 F2:3 families of the cross of H082183 (drought-tolerant) × Lv28 (drought susceptible) were phenotyped with five yield-related traits under four well-watered and six drought environments for two years. Quantitative trait loci analysis identified 133 significant QTLs (94 QTLs for ear traits and 39 QTLs for kernel traits) based on single environment analysis. The joint-environment analysis detected 25 QTLs under well-watered environments (eight QTLs for ear length, eight for ear diameter, one for ear weight, two for kernel weight per ear, and six for 100-kernel weight), and nine QTLs under water-stressed environments (two QTLs for ear length, three for ear diameter, one for ear weight, one for kernel weight, and two for 100-kernel weight). Among these joint-environment QTLs, one common QTL (qEL5) was stably identified at both of the water regimes. Meanwhile, two main-effect QTLs were detected in the well-watered environments, i.e. qEL10 for ear length and qHKW2 for 100-kernel weight. Also, qED8, qEW8, and qKW8 were found to be located in the same interval of Chr. 8. Similarly, qEL4s and qKW4s were found to be located in the same interval under water-stressed environments. These genomic regions could be candidate targets for further fine mapping and marker-assisted breeding in maize

Identification of Human Brain Proteins for Bitter-Sweet Taste Perception: A Joint Proteome-Wide and Transcriptome-Wide Association Study

Objective: Bitter or sweet beverage perception is associated with alterations in brain structure and function. Our aim is to analyze the genetic association between bitter or sweet beverage perception and human brain proteins. Materials and methods: In our study, 8356 and 11,518 proteins were first collected from two reference datasets of human brain proteomes, the ROS/MAP and Banner. The bitter or sweet beverage perception-related proteome-wide association studies (PWAS) were then conducted by integrating recent genome-wide association study (GWAS) data (n = 422,300) of taste perception with human brain proteomes. The human brain gene expression profiles were collected from two reference datasets, including the brain RNA-seq (CBR) and brain RNA-seq splicing (CBRS). The taste perception-related transcriptome-wide association studies (TWAS) were finally performed by integrating the same GWAS data with human brain gene expression profiles to validate the PWAS findings. Results: In PWAS, four statistically significant proteins were identified using the ROS/MAP and then replicated using the Banner reference dataset (all permutated p 0.05), including ABCG2 for total bitter beverages and tea, CPNE1 for total bitter beverage, ACTR1B for artificially sweetened beverages, FLOT2 for alcoholic bitter beverages and total sweet beverages. In TWAS analysis, six statistically significant genes were detected by CBR and confirmed by the CBRS reference dataset (all permutated p 0.05), including PIGG for total bitter beverages and non-alcoholic bitter beverages, C3orf18 for total bitter beverages, ZSWIM7 for non-alcoholic bitter beverages, PEX7 for coffee, PKP4 for tea and RPLP2 for grape juice. Further comparison of the PWAS and TWAS found three common statistically significant proteins/genes identified from the Banner and CBR reference datasets, including THBS4 for total bitter beverages, CA4 for non-alcoholic bitter beverages, LIAS for non-grape juices. Conclusions: Our results support the potential effect of bitter or sweet beverage perception on brain function and identify several candidate brain proteins for bitter or sweet beverage perception

Anti-inflammatory and Antioxidative Effects of Tetrahedral DNA Nanostructures via the Modulation of Macrophage Responses

Tetrahedral DNA nanostructures (TDNs) are a new type of nanomaterials that have recently attracted attention in the field of biomedicine. However, the practical application of nanomaterials is often limited owing to the host immune response. Here, the response of RAW264.7 macrophages to TDNs was comprehensively evaluated. The results showed that TDNs had no observable cytotoxicity and could induce polarization of RAW264.7 cells to the M1 type. TDNs attenuated the expression of NO IL-1β (interleukin-1β), IL-6 (interleukin-6), and TNF-α (tumor necrosis factor-α) in LPS-induced RAW264.7 cells by inhibiting MAPK phosphorylation. In addition, TDNs inhibited LPS-induced reactive oxygen species (ROS) production and cell apoptosis by up-regulating the mRNA expression of antioxidative enzyme heme oxygenase-1 (HO-1). The findings of this study demonstrated that TDNs have great potential as a novel theranostic agent because of their anti-inflammatory and antioxidant activities, high bioavailability, and ease of targeting

Tribological Properties of Nanoclay Reinforced Polyamide-6/Polypropylene Blend

In this study, the tribological performance of polyamide-6 (PA-6), polypropylene (PP), polyamide-6/polypropylene (PA-6/PP) polymer blend, and nanoclay reinforced polyamide-6/polypropylene composite are investigated. Nanoclay reinforced polymer composite is produced by melt compounding using co-rotating twin screw extruder followed by injection moulding. Tribological studies are carried out using a pin-on-stainless steel disc configuration under dry sliding conditions. Tribological tests are carried out at sliding speed of 0.5 ms(-1) and applied load values of 25, 50,100, 150 N. The friction coefficient and specific wear rate values are obtained and evaluated. The results show that the addition of nanoclay into the PA-6/PP polymer blend reduced their coefficient of friction and specific wear rate values. The lowest coefficient of friction and specific wear rate values are for nanoclay reinforced PA-6/PP blend. The highest coefficient of friction and specific wear rate values are for PA-6 polymer

Lower Posterior Cingulate N-Acetylaspartate to Creatine Level in Early Detection of Biologically Defined Alzheimer’s Disease

Alzheimer’s disease (AD) was recently defined as a biological construct to reflect neuropathologic status, and both abnormal amyloid and tau are required for a diagnosis of AD. We aimed to determine the proton MR spectroscopic (1H-MRS) patterns of the posterior cingulate in biologically defined AD. A total of 68 participants were included in this study, comprising 37 controls, 16 early AD, and 15 late AD, who were classified according to their amyloid and tau status and presence of hippocampal atrophy. Compared with controls, early AD showed lower N-acetylaspartate (NAA)/creatine (Cr) (p = 0.003), whereas late AD showed lower NAA/Cr and higher myoInositol (mI)/Cr (all with p < 0.05). Lower NAA/Cr correlated with a greater global amyloid load (r = −0.47, p < 0.001) and tau load (r = −0.51, p < 0.001) and allowed a discrimination of early AD from controls (p < 0.001). Subgroup analysis showed that NAA/Cr also allowed a differentiation of early AD from controls in the cognitively unimpaired subjects, with an area under the receiver operating characteristics curve, sensitivity, and specificity of 0.96, 100%, and 83.8%, respectively. Lower posterior cingulate NAA levels may help to inform underlying neuropathologic changes in the early stage of AD