High level of hybridisation in three species of Indian major carps

Thirty individuals of each species of Indian major carps, i.e., Catla catla, Cirrhinus cirrhosus (C. mrigala) and Labeo rohita, obtained from a nursery near Mymensingh, Bangladesh were analysed by means of allozyme electrophoresis. Twenty-one loci were studied. Several loci revealed significant deviation from Hardy-Weinberg expectations caused by deficiency of heterozygotes, indicating Wahlund effects due to problems with species identification. Moreover, bimodal distributions of individual heterozygosity within the three putative species indicated hybridisation. This was confirmed using analysis of individual admixture proportions, as individuals misidentified to species and hybrids between species were observed. Furthermore, factorial correspondence analysis to visualize genetic relationships among individuals revealed three distinct groups containing misclassified individuals, along with some intermediate individuals interpreted as hybrids. Ten per cent of all C. catla and L. rohita had been erroneously identified to species, and 40 per cent of all presumptive C. catla were hybrids between C. catla x C. cirrhosus and C. catla x L. rohita. In the case of C. cirrhosus, 37 per cent of the samples were C. cirrhosus x L. rohita hybrids. Thirty per cent of all presumptive L. rohita turned out to be hybrids between L. rohita x C. catla and L. rohita x C. cirrhosus. The high incidence of hybrids in C. catla might be responsible for slower growth of the fish in aquaculture

High level of hybridisation in three species of Indian major carps

Thirty individuals of each species of Indian major carps, i.e., Catla catla, Cirrhinus cirrhosus (C. mrigala) and Labeo rohita, obtained from a nursery near Mymensingh, Bangladesh were analysed by means of allozyme electrophoresis. Twenty-one loci were studied. Several loci revealed significant deviation from Hardy-Weinberg expectations caused by deficiency of heterozygotes, indicating Wahlund effects due to problems with species identification. Moreover, bimodal distributions of individual heterozygosity within the three putative species indicated hybridisation. This was confirmed using analysis of individual admixture proportions, as individuals misidentified to species and hybrids between species were observed. Furthermore, factorial correspondence analysis to visualize genetic relationships among individuals revealed three distinct groups containing misclassified individuals, along with some intermediate individuals interpreted as hybrids. Ten per cent of all C. catla and L. rohita had been erroneously identified to species, and 40 per cent of all presumptive C. catla were hybrids between C. catla x C. cirrhosus and C. catla x L. rohita. In the case of C. cirrhosus, 37 per cent of the samples were C. cirrhosus x L. rohita hybrids. Thirty per cent of all presumptive L. rohita turned out to be hybrids between L. rohita x C. catla and L. rohita x C. cirrhosus. The high incidence of hybrids in C. catla might be responsible for slower growth of the fish in aquaculture.Hybridization, DNA, Freshwater fish, Fish culture, Allozymes, Growth, Bangladesh, Catla catla, Cirrhinus cirrhosus, Cirrhinus mrigala, Labeo rohita

Light scattering from an amplifying medium bounded by a randomly rough surface: A numerical study

We study by numerical simulations the scattering of $s$-polarized light from a rough dielectric film deposited on the planar surface of a semi-infinite perfect conductor. The dielectric film is allowed to be either active or passive, situations that we model by assigning negative and positive values, respectively, to the imaginary part $\epsilon_2$ of the dielectric constant of the film. We study the reflectance ${\cal R}$ and the total scattered energy ${\cal U}$ for the system as functions of both $\epsilon_2$ and the angle of incidence of the light. Furthermore, the positions and widths of the enhanced backscattering and satellite peaks are discussed. It is found that these peaks become narrower and higher when the amplification of the system is increased, and that their widths scale linearly with $\epsilon_2$. The positions of the backscattering peaks are found to be independent of $\epsilon_2$, while we find a weak dependence on this quantity in the positions of the satellite peaks.Comment: Revtex, 9 pages, 9 figure

Light scattering from self-affine fractal silver surfaces with nanoscale cutoff: Far-field and near-field calculations

We study the light scattered from randomly rough, one-dimensional self-affine fractal silver surfaces with nanoscale lower cutoff, illuminated by s- or p-polarized Gaussian beams a few microns wide. By means of rigorous numerical calculations based on the Green theorem integral equation formulation, we obtain both the far- and near-field scattered intensities. The influence of diminishing the fractal lower scale cutoff (from below a hundred, down to a few nanometers) is analyzed in the case of both single realizations and ensemble average magnitudes. For s polarization, variations are small in the far field, being only significant in the higher spatial frequency components of evanescent character in the near field. In the case of p polarization, however, the nanoscale cutoff has remarkable effects stemming from the roughness-induced excitation of surface-plasmon polaritons. In the far field, the effect is noticed both in the speckle pattern variation and in the decrease of the total reflected energy upon ensemble averaging, due to increased absorption. In the near field, more efficient excitation of localized optical modes is achieved with smaller cutoff, which in turn leads to huge surface electric field enhancements.Comment: REVTeX 4, 10 page

Median Statistics, H_0, and the Accelerating Universe

(Abridged) We develop median statistics that provide powerful alternatives to chi-squared likelihood methods and require fewer assumptions about the data. Applying median statistics to Huchra's compilation of nearly all estimates of the Hubble constant, we find a median value H_0=67 km/s/Mpc. Median statistics assume only that the measurements are independent and free of systematic errors. This estimate is arguably the best summary of current knowledge because it uses all available data and, unlike other estimates, makes no assumption about the distribution of measurement errors. The 95% range of purely statistical errors is +/- 2 km/s/Mpc. The statistical precision of this result leads us to analyze the range of possible systematic errors in the median, which we estimate to be roughly +/- 5 km/s/Mpc (95% limits), dominating over the statistical errors. A Bayesian median statistics treatment of high-redshift Type Ia supernovae (SNe Ia) apparent magnitude versus redshift data from Riess et al. yields a posterior probability that the cosmological constant Lambda > 0 of 70 or 89%, depending on the prior information used. The posterior probability of an open universe is about 47%. Analysis of the Perlmutter et al. high-redshift SNe Ia data show the best-fit flat-Lambda model favored over the best-fit Lambda = 0 open model by odds of 366:1; corresponding Riess et al. odds are 3:1 (assuming prior odds of 1:1).Median statistics analyses of the SNe Ia data do not rule out a time-variable Lambda model, and may even favor it over a time-independent Lambda and a Lambda = 0 open model.Comment: Significant revisions include discussion of systematic errors in the median of H_0. Accepted for publication in The Astrophysical Journal, v548, February 20, 2001 issue. 47 pages incl. figures and table

A step towards high resolution modeling of the central Faroe shelf circulation by FarCoast800

This paper describes the FarCoast800 model setup for the Faroe shelf and the validation towards observations. We found that the circulation was in accordance with observations on the shelf and the upper 500m of the water column, away from the lateral boundaries. Furthermore, we found high correlations between the model and observations for the on-shelf water, in particular for short-term variations of temperature, demonstrating the importance of high resolution atmospheric forcing. A main challenge for this study was the lateral boundary conditions at all four open boundaries in the varying and steep bathymetry of the FarCoast800 model setup. We also investigated the origin of water reaching the different areas of the shelf. Notably our results indicated intrusion of water originating from the East Icelandic Current into the deeper areas on the eastern part of the Faroe shelf. Our long term motivation of the study was to investigate the capability of the model to drive an even higher resolution ROMS model setup for the central Faroe shelf, enabling the resolution of processes on a 100m scale or less. The study concludes that FarCoast800 can drive a high-resolution nested model area on the Faroe shelf. Here we present a Regional Ocean Model System (ROMS) model setup for the Faroe shelf with a horizontal resolution of 800m x 800m and 35 vertical layers. The model setup is forced by a high resolution atmospheric model, and forced by a 4km x 4km horizontal resolution version of the ROMS model on the lateral boundaries. We name our model setup FarCoast800. The model setup was run for the entire sample year 2013.publishedVersio

The association between bacterial infections and the risk of coronary heart disease in type 1 diabetes

Background Diabetes increases the risk of infections as well as coronary heart disease (CHD). Whether infections increase the risk of CHD and how this applies to individuals with diabetes is unclear. Objectives To investigate the association between bacterial infections and the risk of CHD in type 1 diabetes. Methods Individuals with type 1 diabetes (n = 3781) were recruited from the Finnish Diabetic Nephropathy Study (FinnDiane), a prospective follow-up study. CHD was defined as incident events: fatal or non-fatal myocardial infarction, coronary artery bypass surgery or percutaneous coronary intervention, identified through national hospital discharge register data. Infections were identified through national register data on all antibiotic purchases from outpatient care. Register data were available from 1.1.1995-31.12.2015. Bacterial lipopolysaccharide (LPS) activity was measured from serum samples at baseline. Data on traditional risk factors for CHD were collected during baseline and consecutive visits. Results Individuals with an incident CHD event (n = 370) had a higher mean number of antibiotic purchases per follow-up year compared to those without incident CHD (1.34 [95% CI: 1.16-1.52], versus 0.79 [0.76-0.82],P <0.001), as well as higher levels of LPS activity (0.64 [0.60-0.67], versus 0.58 EU mL(-1)[0.57-0.59],P <0.001). In multivariable-adjusted Cox proportional hazards models, the mean number of antibiotic purchases per follow-up year was an independent risk factor for incident CHD (HR 1.21, 95% CI: 1.14-1.29,P <0.0001). High LPS activity was a risk factor for incident CHD (HR 1.93 [1.34-2.78],P <0.001) after adjusting for static confounders. Conclusion Bacterial infections are associated with an increased risk of incident CHD in individuals with type 1 diabetes.Peer reviewe