Genetic Variability for Resistance to Leaf Blight and Diversity among Selected Maize Inbred Lines

Maize (Zea mays L.) is an important staple food crop in sub-Saharan Africa (SSA). The productivity of the crop is limited partly by the leaf blight disease caused by Exserohilum turcicum. In breeding for resistance to leaf blight, the germplasm needs to be well-characterized in order to design efficient breeding programs. This study evaluated the (i) genetic variability among maize inbred lines and (ii) diversity of selected medium to late maturity tropical maize inbred lines for hybrid breeding. Plants of 50 maize inbred lines were artificially inoculated in the field during 2011 and 2012. Disease severity and incidence as well as grain yield were measured. A subset of 20 elite maize inbred lines was genotyped using 20 SSR markers. The germplasm showed significant differences in reaction to leaf blight and were classified as either resistant or intermediate or susceptible. Mean disease severity varied from 2.04 to 3.25. Seven inbred lines were identified as potential sources of resistance to leaf blight for the genetic improvement of maize. The genotyping detected 108 alleles and grouped the inbred lines into five clusters consistent with their pedigrees. The genetic grouping in the source population will be useful in the exploitation of tropical maize breeding programs

Potential of Improving Agronomic Attributes in Tropical Legumes Using Two Mutation Breeding Techniques in Southern Africa

Tropical legumes such as cowpea (Vigna unguiculata) and tepary bean (Phaseolus acutifolius) are important in traditional smallholder cropping systems, particularly in sub-Saharan Africa. Both legumes are adapted to harsh environments including extreme temperatures, drought and poor soil fertility. They provide affordable sources of protein for human consumption and are valuable for income generation. These crops contribute significantly to soil fertility improvement through biological nitrogen fixation. In many parts of Africa, the productivity of these legumes is generally low partly because farmers grow unimproved varieties that are often produced for subsistence purposes on poor soils in mixed cropping systems with limited production inputs. Therefore, this research was designed to evaluate the potential of two distinct mutation breeding approaches in creating useful genetic variation in the two legumes in order to improve the agronomic attributes of both crops. The variation was determined by measuring a range of agronomic traits at both the seedling and adult plant stages. The results showed significant genetic variation among cowpea mutants that were induced with various doses of gamma radiation as well as among tepary bean mutants that were induced with a chemical mutagenic agent, ethyl methanesulphonate (EMS). The optimum doses at LD50 for two cowpea genotypes (Nakare and Shindimba) were ≤200 Gy while the third genotype (Bira) tolerated a dose three-fold higher. In the EMS mutagenesis of tepary bean, the estimated LD50 was ≤2.4% EMS (v/v). In both approaches, percent seed germination decreased with increased dose and the coefficients of determination for the linear functions were high (>75%), suggesting that there were notable associations between the reduction in seed germination and the concentration of the mutagen. At the adult plant stage, tepary bean showed that the mutant generation significantly (P 10.0% increase in both seed size and grain yield potential of some mutant cowpea genotypes compared with the standard check. These findings provide reference doses for large-scale gamma irradiation of cowpea as well as chemical mutagenesis for tepary bean. In addition, the germplasm produced from these approaches has the potential for selection in a range of agro-ecological conditions across the region, thus creating alternative cropping systems for the smallholder growers

Schistosomiasis mansoni and soil-transmitted helminthiasis in Bushulo village, southern Ethiopia

Background: Schistosomiasis mansoni and soil-transmitted helminthiasis (STHs) are considerable medical and public health problems in Ethiopia. However, information is limited on the epidemiology of these infections in different localities even though it is needed to plan effective prevention and control measures. Objective: This study was designed to determine the prevalence of Schistosoma mansoni and soil-transmitted helminth infections in school children and residents in Bushulo village near Lake Awassa (Hawassa), southern Ethiopia. Methods: Cross-sectional epidemiological and parasitological studies were conducted on schistosomiasis mansoni and STHs in Bushulo village in May and June 2007. A total of 419 participants (353 school children and 66 other residents) were included in the study. The principal investigator interviewed the study subjects about demographic status using structured questionnaires. Moreover, experienced nurse took history and conducted physical examination to assess symptoms and signs related to chronic S. mansoni infection. A single stool sample was collected from each participant and processed using the Kato-Katz technique. Experienced laboratory technician read all slides at Bushulo Health Center. Results: The overall infection rates of schistosomiasis mansoni, trichuriasis, ascariasis and hookworm infection were 73.7%, 41.5%, 37.2% and 28.4%, respectively. Other parasitic infections observed were caused by Hymenolepis nana (1.7%), Taenia species (1.4%), and Enterobius vermicularis (1.4%). Children in the age range 10-14 years and those attending at St. Paul’s School had higher rates of T. trichiura and S. mansoni, respectively. Intensity of infection was higher for A. lumbricoides in the age range 5-9 years. The overall prevalence of any STHs was 67.3%. The rates of single, dual, triple and quadruple infections were 29.6%, 32%, 20.3% and 7.4%, respectively. Conclusion: The high prevalence and intensity of schistosomiasis mansoni and soil-transmitted helminthiasis makes periodic deworming programme urgent to reduce morbidity and transmission of helminthiasis in the area. Provisions of sanitary facilities and clean water supply as well as health education are also critically needed to sustain the impact of chemotherapy

A bis-calixarene from olefin metathesis

A ring-closing olefin metathesis reaction of tetra­kis­(all­yl­oxy)calix[4]arene gave the bis­ calixarene, (15E,40E,60E)-65,74-bis­(prop-2-en-1-yl­oxy)-13,18,38,43,58,63-hexa­oxado­deca­cyclo­[28.26.8.720,36.111,45.151,55.05,57.07,12.019,24.026,64.032,37.044,49.168,72]tetra­hepta­conta-1,3,5(57),7,9,11,15,19(24),20,22,26,28,30(64),32,34,36,40,44(49),45,47,51,53,55(65),60,68,70,72(74)-hepta­cosa­ene, C74H68O8. It is a cage formed from two calix[4]arene units joined by butenyl groups at three of the O atoms on the narrow rim. The fourth O atom on each calixarene unit is joined with an allyl group. Each of the calix[4]arene units has a flattened cone conformation in which the all­yloxy-substituted aryl group and the opposite aryl group are close together and almost parallel [dihedral angle between planes = 1.09 (11)°], and the other two aryl groups are splayed outward [dihedral angle between planes = 79.53 (11)°]. No guest mol­ecule (e.g. solvent) was observed within the cage. The alkene C atoms of one of the links between the calixarene moieties are disordered over two orientations with occupancies of 0.533 (9) and 0.467 (9)

A Randomized Controlled Double Blind Trial of Ciclosporin versus Prednisolone in the Management of Leprosy Patients with New Type 1 Reaction, in Ethiopia.

BACKGROUND: Leprosy Type 1 (T1R) reactions are immune-mediated events leading to nerve damage and preventable disability affecting hands, feet and eyes. Type 1 Reactions are treated with oral corticosteroids. There is little evidence on alternative treatments for patients who do not respond to steroids or experience steroid adverse effects. We report the results of a randomized controlled trial testing the efficacy and adverse effect profile of ciclosporin and prednisolone (CnP) in comparison to prednisolone only (P) in patients with new T1R in Ethiopia. Ciclosporin is a potent immunosuppressant. Outcomes were measured using a clinical severity score, recurrence rate, adverse events and quality of life. RESULTS: Seventy three patients with new T1R were randomized to receive CnP or P for 20 weeks. Recovery rates in skin signs was similar in both groups (91% vs 88%). Improvements in nerve function both, new and old, sensory (66% vs 49%) and motor (75% vs 74%) loss were higher (but not significantly so) in the patients on CnP. Recurrences rates of T1R (85%) were high in both groups, and recurrences occurred significantly earlier (8 weeks) in patients CnP, who needed 10% more additional prednisolone. Serious major and minor adverse events rates were similar in patients in the two treatment arms of the study. Both groups had a significant improvement in their quality of life after the study, measured by the SF-36. CONCLUSIONS: This is the first double-blind RCT assessing ciclosporin, in the management of T1R in Africa. Ciclosporin could be a safe alternative second-line drug for patients with T1R who are not improving with prednisolone or are experiencing adverse events related to prednisolone. This study illustrates the difficulty in switching off leprosy inflammation. Better treatment agents for leprosy patients with reactions and nerve damage are needed

Variance components and heritability of traits related to Striga asiatica resistance and compatibility to Fusarium oxysporum F.Sp. Strigae in maize

Genetic gain in breeding maize for yield and yield components and Striga resistance is dependent on the magni-tude of genetic variation and heritability. The objective of this study was to determine variance components and heritability of yield and yield-related traits and Striga asiatica (L.) Kuntze resistance in maize involving a bio-control agent Fusarium oxysporum f.sp. strigae (FOS). Eighteen selected and genetically diverse maize populations were evaluated across nine testing environments in three sites under three levels of FOS treatment during the 2016/2107 growing season using an alpha lattice design with two replications. Variance components, heritability estimates and correlations among S. asiatica traits, grain yield and yield components of maize were calculated to provide a selec-tion guide. Significantdifferences (P0.5) were recorded for ear aspect (0.58), cob length (0.60), grain yield t ha-1 (0.61), grain yield plant-1 (0.65), cob diameter (0.83), 100 kernel weight (0.91); Striga counts (0.71) and Striga damage rating (0.75). Grain yield t ha -1 and its components were negatively corre-lated with Striga parameters under FOS treatments. Yield-related traits such as cob length, cob diameter, and 100 kernel weight were important in indirect selection for FOS compatible and Striga resistant maize genotypes. FOS could serve as an effective bio-control agent against S. asiatica in maize production using compatible genotype

Adult plant resistance of selected Kenyan wheat cultivars to leaf rust and stem rust diseases

Phenotypic and genotypic evaluation of wheat genetic resources and development of segregating populations are pre-requisites for identifying rust resistance genes. The objectives of this study were to assess adult plant resistance (APR) of selected wheat genotypes to leaf rust and stem rust and to develop segregating populations for resistance breeding. Eight selected Kenyan cultivars with known resistance to stem rust, together with local checks were evaluated for leaf rust and stem rust resistance at seedling stage and also across several environments. Selected diagnostic markers were used to determine the presence of known genes. All eight cultivars were crossed with local checks using a bi-parental mating design. Seedling tests revealed that parents exhibited differential infection types against wheat rust races. Cultivars Paka and Popo consistently showed resistant infection types at seedling stage, while Gem, Romany, Pasa, Fahari, Kudu, Ngiri and Kariega varied for resistant and susceptible infection types depending on the pathogen race used. The control cultivars Morocco and McNair consistently showed susceptible infection types as expected. In the field, all cultivars except for Morocco showed moderate to high levels of resistance, indicating the presence of effective resistance genes. Using diagnostic markers, presence of Lr34 was confirmed in Gem, Fahari, Kudu, Ngiri and Kariega, while Sr2 was present in Gem, Romany, Paka and Kudu. Seedling resistance gene, Sr35, was only detected in cultivar Popo. Overall, the study developed 909 F6:8 recombinant inbred lines (RILs) as part of the nested mating design and are useful genetic resources for further studies and for mapping wheat rust resistance genes

Prevalence of Hepatitis B surface antigen (HBsAg) among visitors of Shashemene General Hospital voluntary counseling and testing center

<p>Abstract</p> <p>Background</p> <p>Hepatitis B virus (HBV) infection is significant health problem, as it can lead to chronic hepatitis, liver cirrhosis, and hepatic carcinoma. Due to shared routes of transmission, HBV and human immunodeficiency virus (HIV) co-infection is common and is an emerging concern in the clinical management of patients because of increased mortality, accelerated hepatic disease progression, and the frequent hepatotoxicity caused by anti-retroviral therapy. The aim of this study was to determine the prevalence of Hepatitis B surface antigen (HBsAg) and its risk factors, among individuals visiting Shashemene General Hospital VCT center.</p> <p>Findings</p> <p>Institution based cross-sectional study was performed from November 3, 2008 to December 29, 2008 and 384 voluntary counseling and testing (VCT) clients were investigated. Data on socio demographic and HBV risk factors was collected using structured questionnaires. Blood samples were collected and screened for hepatitis B surface antigen (HBsAg) and HIV by commercially available rapid test kits. The prevalence of HBsAg in this study group was 5.7%. Fourteen percent of HIV positive subjects (8/57) and 4.3% (14/327) of HIV negative subjects were positive for HBsAg. Significantly high prevalence of HBsAg was observed among individuals who had history of invasive procedures, like tooth extraction, abortion and ear piercing; history of hospital admission, history of unsafe inject and HIV positives.</p> <p>Conclusions</p> <p>Although HBsAg prevalence is much higher among subjects who are HIV positive (14.0% versus 4.3%), the prevalence of HBsAg in HIV negative subjects is high enough to warrant a recommendation to screen all clients at VCT centers irrespective of HIV status.</p

Quantification Bias Caused by Plasmid DNA Conformation in Quantitative Real-Time PCR Assay

Quantitative real-time PCR (qPCR) is the gold standard for the quantification of specific nucleic acid sequences. However, a serious concern has been revealed in a recent report: supercoiled plasmid standards cause significant over-estimation in qPCR quantification. In this study, we investigated the effect of plasmid DNA conformation on the quantification of DNA and the efficiency of qPCR. Our results suggest that plasmid DNA conformation has significant impact on the accuracy of absolute quantification by qPCR. DNA standard curves shifted significantly among plasmid standards with different DNA conformations. Moreover, the choice of DNA measurement method and plasmid DNA conformation may also contribute to the measurement error of DNA standard curves. Due to the multiple effects of plasmid DNA conformation on the accuracy of qPCR, efforts should be made to assure the highest consistency of plasmid standards for qPCR. Thus, we suggest that the conformation, preparation, quantification, purification, handling, and storage of standard plasmid DNA should be described and defined in the Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE) to assure the reproducibility and accuracy of qPCR absolute quantification