Reconstruction of Past Environmental Changes in Southern Patagonia Using Stable Isotopes

Paleoclimate reconstructions allow us to build a better picture of how climate has changed over time. However, relatively little research has been done in the higher latitudes of the southern hemisphere, leaving a gap in our knowledge. Changes in temperature and moisture can have significant impacts on local vegetation growth structure and ecosystem functioning; these changes in hydroclimatic conditions can be traced using stable isotope analysis of carbon (δ13C), oxygen (δ18O), and hydrogen (δ2H) in peat deposits. Throughout this project, I aimed to determine the effects of changes in precipitation amounts and sources of moisture in southernmost Patagonia using peat-core samples collected in 2010. The top 350 cm (~ 4200 cal. BP) of the core was analyzed in 2-centimeter increments. For each horizon, Sphagnum magellanicum moss stems were handpicked and cleaned. Cellulose from the moss stems was then extracted following the alkaline bleaching method and the samples were analyzed for δ13C and δ18O using a mass spectrometer. The combination of these isotopes allows to tease apart local (soil moisture) vs. regional (moisture source) environmental effects. On the basis of previous studies, cellulose values that are more depleted in the heavier isotope are expected to correspond to wetter conditions (and less depleted values with drier conditions). Our results show a progressive wetting of the peatland from 4000 years ago until approximately 1500 years ago; conversely, the past 1000 years have seen drying conditions. These results coincide with other regional paleoclimate reconstructions that suggest decreased winds during the earlier period (which can be interpreted as wetter conditions, likely due to lower evaporation), and vice versa during the more recent period

An observational test of common-envelope evolution

By analysing and modelling the change in the abundance ratio of $^{12}$C/$^{13}$C and $^{16}$O/$^{17}$O on the surface of the lower mass star of a binary during the common-envelope (CE) phase of evolution, we propose a simple observational test of the CE scenario. The test is based on the infrared measurement of either the $^{12}$C/$^{13}$C or $^{16}$O/$^{17}$O ratio of red dwarfs in post-common envelope binaries (PCEB's). In certain cases (main-sequence red dwarf secondaries in PCEB's without planetary nebulae), as well as determining whether or not accretion has occurred during the CE phase, we can determine the amount of mass accreted during the CE phase and hence the initial mass of the red dwarf component prior to the CE phase. In the other cases considered (low-mass red dwarfs in PCEB's and red dwarf's in PCEB's with planetary nebulae) we can only say whether or not accretion has occurred during the CE phase.Comment: uuencoded compressed postscript. The preprint are also available at URL http://www.ast.cam.ac.uk/preprint/PrePrint.htm

From the Heart of The Ghoul: C and N Abundances in the Corona of Algol B

Chandra Low Energy Transmission Grating Spectrograph observations of Algol have been used to determine the abundances of C and N in the secondary star for the first time. The analysis was performed relative to similar observations of an adopted "standard" star HR 1099. It is demonstrated that HR 1099 and Algol are coronal twins in many respects and that their X-ray spectra are very similar in nearly all details, except for the observed strengths of C and N lines. The H-like transitions of C and N in the coronae of Algol and HR 1099 demonstrate that the surface abundances of Algol B have been strongly modified by CN-processing, as shown earlier by Schmitt & Ness (2002). It is found that N is enhanced in Algol B by a factor of 3 compared to HR 1099. No C lines are detected in the Algol spectrum, indicating a C depletion relative to HR 1099 by a factor of 10 or more. These C and N abundances indicate that Algol B must have lost at least half of its initial mass, and are consistent with predictions of evolutionary models that include non-conservative mass transfer and angular momentum loss through magnetic activity. Little or no dredge-up of material subjected to CN-processing has occurred on the subgiant component of HR 1099. It is concluded that Fe is very likely depleted in the coronae of both Algol and HR 1099 relative to their photospheres by 0.5 dex, and C, N and O by 0.3 dex. Instead, Ne is enhanced by up to 0.5 dex.Comment: 17 pages, 4 figures, ApJ accepte

Rings Reconcile Genotypic and Phenotypic Evolution within the Proteobacteria.

Although prokaryotes are usually classified using molecular phylogenies instead of phenotypes after the advent of gene sequencing, neither of these methods is satisfactory because the phenotypes cannot explain the molecular trees and the trees do not fit the phenotypes. This scientific crisis still exists and the profound disconnection between these two pillars of evolutionary biology--genotypes and phenotypes--grows larger. We use rings and a genomic form of goods thinking to resolve this conundrum (McInerney JO, Cummins C, Haggerty L. 2011. Goods thinking vs. tree thinking. Mobile Genet Elements. 1:304-308; Nelson-Sathi S, et al. 2015. Origins of major archaeal clades correspond to gene acquisitions from bacteria. Nature 517:77-80). The Proteobacteria is the most speciose prokaryotic phylum known. It is an ideal phylogenetic model for reconstructing Earth's evolutionary history. It contains diverse free living, pathogenic, photosynthetic, sulfur metabolizing, and symbiotic species. Due to its large number of species (Whitman WB, Coleman DC, Wiebe WJ. 1998. Prokaryotes: the unseen majority. Proc Nat Acad Sci U S A. 95:6578-6583) it was initially expected to provide strong phylogenetic support for a proteobacterial tree of life. But despite its many species, sequence-based tree analyses are unable to resolve its topology. Here we develop new rooted ring analyses and study proteobacterial evolution. Using protein family data and new genome-based outgroup rooting procedures, we reconstruct the complex evolutionary history of the proteobacterial rings (combinations of tree-like divergences and endosymbiotic-like convergences). We identify and map the origins of major gene flows within the rooted proteobacterial rings (P < 3.6 × 10(-6)) and find that the evolution of the "Alpha-," "Beta-," and "Gammaproteobacteria" is represented by a unique set of rings. Using new techniques presented here we also root these rings using outgroups. We also map the independent flows of genes involved in DNA-, RNA-, ATP-, and membrane- related processes within the Proteobacteria and thereby demonstrate that these large gene flows are consistent with endosymbioses (P < 3.6 × 10(-9)). Our analyses illustrate what it means to find that a gene is present, or absent, within a gene flow, and thereby clarify the origin of the apparent conflicts between genotypes and phenotypes. Here we identify the gene flows that introduced photosynthesis into the Alpha-, Beta-, and Gammaproteobacteria from the common ancestor of the Actinobacteria and the Firmicutes. Our results also explain why rooted rings, unlike trees, are consistent with the observed genotypic and phenotypic relationships observed among the various proteobacterial classes. We find that ring phylogenies can explain the genotypes and the phenotypes of biological processes within large and complex groups like the Proteobacteria

Near-Infrared Light Curves of the Black Hole Binary A0620-00

We measured the near-infrared orbital light curve of the black hole binary A0620-00 in 1995 and 1996. The light curves show an asymmetric, double-humped modulation with extra emission in the peak at orbital phase 0.75. There were no significant changes in the shape of the light curve over the one-year observation period. There were no sharp dips in the light curves nor reversals of the asymmetry between the two peaks as seen in earlier observations. The light curves are well fit by models incorporating ellipsoidal variations from the mass-losing K-type star plus a beamed bright spot on the accretion disk around the compact star. The long-term stability of the light curve shape rules out superhumps and star spots as sources of asymmetry when we observed A0620-00. The ellipsoidal variations yield a lower limit i >= 38 deg on the orbital inclination. The light curves show no eclipse features, which places an upper limit i <= 75 deg. This range of inclinations constrains the mass of the compact object to 3.3 < M_1 < 13.6 Msun. The light curves do not further constrain the orbital inclination because the contribution of the accretion disk to the observed flux is unknown. We argue that a previous attempt to measure the near-infrared flux from the accretion disk using the dilution of the 12CO(2,0) bandhead in the spectrum of the K star is not reliable because the band strength depends strongly on surface gravity.Comment: Accepted for publication in the Astronomical Journal. 17 pages, 4 figures. Prepared using AASTEX V. 5.

The Discovery of a Companion to the Lowest Mass White Dwarf

We report the detection of a radial velocity companion to SDSS J091709.55+463821.8, the lowest mass white dwarf currently known with M~0.17Msun. The radial velocity of the white dwarf shows variations with a semi-amplitude of 148.8 km/s and a period of 7.5936 hours, which implies a companion mass of M > 0.28Msun. The lack of evidence of a companion in the optical photometry forces any main-sequence companion to be smaller than 0.1Msun, hence a low mass main sequence star companion is ruled out for this system. The companion is most likely another white dwarf, and we present tentative evidence for an evolutionary scenario which could have produced it. However, a neutron star companion cannot be ruled out and follow-up radio observations are required to search for a pulsar companion.Comment: ApJ, in press. See the Press Release at http://www.cfa.harvard.edu/press/2007/pr200708.htm

Scavenging of retinoid cation radicals by urate, trolox, and α-, β-, γ-, and δ-tocopherols

Retinoids are present in human tissues exposed to light and under increased risk of oxidative stress, such as the retina and skin. Retinoid cation radicals can be formed as a result of the interaction between retinoids and other radicals or photoexcitation with light. It has been shown that such semi-oxidized retinoids can oxidize certain amino acids and proteins, and that α-tocopherol can scavenge the cation radicals of retinol and retinoic acid. The aim of this study was to determine (i) whether β-, γ-, and δ-tocopherols can also scavenge these radicals, and (ii) whether tocopherols can scavenge the cation radicals of another form of vitamin A-retinal. The retinoid cation radicals were generated by the pulse radiolysis of benzene or aqueous solution in the presence of a selected retinoid under oxidizing conditions, and the kinetics of retinoid cation radical decays were measured in the absence and presence of different tocopherols, Trolox or urate. The bimolecular rate constants are the highest for the scavenging of cation radicals of retinal, (7 to 8) × 109 M−1·s−1, followed by retinoic acid, (0.03 to 5.6) × 109 M−1·s−1, and retinol, (0.08 to 1.6) × 108 M−1·s−1. Delta-tocopherol is the least effective scavenger of semi-oxidized retinol and retinoic acid. The hydrophilic analogue of α-tocopherol, Trolox, is substantially less efficient at scavenging retinoid cation radicals than α-tocopherol and urate, but it is more efficient at scavenging the cation radicals of retinoic acid and retinol than δ-tocopherol. The scavenging rate constants indicate that tocopherols can effectively compete with amino acids and proteins for retinoid cation radicals, thereby protecting these important biomolecules from oxidation. Our results provide another mechanism by which tocopherols can diminish the oxidative damage to the skin and retina and thereby protect from skin photosensitivity and the development and/or progression of changes in blinding retinal diseases such as Stargardt’s disease and age-related macular degeneration (AMD)

Emphysematous cystitis: An unusual disease of the Genito-Urinary system suspected on imaging

Emphysematous cystitis is a rare disease entity caused by gas fermenting bacterial and fungal pathogens. Clinical symptoms are nonspecific and diagnostic clues often arise from the unanticipated imaging findings. We report a case of 52-year-old male who presented with fever, dysuria and gross hematuria who was found to have emphysematous cystitis

The surprising external upturn of the Blue Straggler radial distribution in M55

By combining high-resolution HST and wide-field ground based observations, in ultraviolet and optical bands, we study the Blue Straggler Star (BSS) population of the low density galactic globular cluster M55 (NGC 6809) over its entire radial extent. The BSS projected radial distribution is found to be bimodal, with a central peak, a broad minimum at intermediate radii, and an upturn at large radii. Similar bimodal distributions have been found in other globular clusters (M3, 47 Tucanae, NGC 6752, M5), but the external upturn in M55 is the largest found to date. This might indicate a large fraction of primordial binaries in the outer regions of M55, which seems somehow in contrast with the relatively low (\sim 10%) binary fraction recently measured in the core of this cluster.Comment: in press on Ap