Relative role of wind forcing and riverine nutrient input on the extent of hypoxia in the northern Gulf of Mexico

Seasonal hypoxia of the northern Gulf of Mexico has been observed for more than 25 years. It is generally accepted that the variation in the areal extent of hypoxia is determined by changes in nutrient addition from the Mississippi River. In this study, we investigate the statistical relation between the hypoxic area and a new variable, the duration of west wind, using the available measurements for the period 1985-2010. Special consideration was paid to the 1993-2010 period, a time when a large shift in the seasonal hypoxia pattern has been reported. When excluding the years in which hurricanes directly impacted the hypoxic area observation, we find that the duration of west wind is correlated with the hypoxic area at r(2) = 0.32 for the 1985-2010 period, and r(2) = 0.52 for the 1993-2010 period. Multilinear regressions using both wind duration and May-June nitrate loading improve the statistical relationships for both periods to r(2) = 0.69 and 0.74 for the long and short time periods, respectively. Mechanistically, the statistical relationships reflect the movement and changes in horizontal river plume position associated with the wind and the influence of stratification on the hypoxic area. Citation: Feng, Y., S. F. DiMarco, and G. A. Jackson (2012), Relative role of wind forcing and riverine nutrient input on the extent of hypoxia in the northern Gulf of Mexico, Geophys. Res. Lett., 39, L09601, doi:10.1029/2012GL051192

Patterns of Pacific decadal variability recorded by Indian Ocean corals

We investigate Pacific Decadal Oscillation (PDO) signals recorded by two bimonthly resolved coral δ18O series from La Réunion and Ifaty (West Madagascar), Indian Ocean from 1882 to 1993. To isolate the main PDO frequencies, we apply a band pass filter to the time series passing only periodicities from 16 to 28 years. We investigate the covariance patterns of the coral time series with sea surface temperature (SST) and sea level pressure (SLP) of the Indian and Pacific Oceans. In addition, the empirical orthogonal functions of the filtered SST and SLP fields (single and coupled) are related to the filtered coral times series. The covariance maps show the typical PDO pattern for SST and SLP, confirming the coupling between the Indian and Pacific Oceans. Both corals show the strongest signal in boreal summer. The La Réunion (Ifaty) coral better records SST (SLP) than SLP (SST) pattern variability. We suggest that the filtered La Réunion coral δ18O represents δ18O of seawater that varies with the South Equatorial Current, which, in turn, is linked with the SST PDO. The filtered Ifaty coral δ18O represents SST and is remotely linked with the SLP PDO variability. A combined coral record of the Ifaty and La Réunion boreal summer δ18O series explains about 64% of the variance of the coupled SST/SLP PDO time series

Metabolic Engineering of Cofactor F420 Production in Mycobacterium smegmatis

Cofactor F420 is a unique electron carrier in a number of microorganisms including Archaea and Mycobacteria. It has been shown that F420 has a direct and important role in archaeal energy metabolism whereas the role of F420 in mycobacterial metabolism has only begun to be uncovered in the last few years. It has been suggested that cofactor F420 has a role in the pathogenesis of M. tuberculosis, the causative agent of tuberculosis. In the absence of a commercial source for F420, M. smegmatis has previously been used to provide this cofactor for studies of the F420-dependent proteins from mycobacterial species. Three proteins have been shown to be involved in the F420 biosynthesis in Mycobacteria and three other proteins have been demonstrated to be involved in F420 metabolism. Here we report the over-expression of all of these proteins in M. smegmatis and testing of their importance for F420 production. The results indicate that co–expression of the F420 biosynthetic proteins can give rise to a much higher F420 production level. This was achieved by designing and preparing a new T7 promoter–based co-expression shuttle vector. A combination of co–expression of the F420 biosynthetic proteins and fine-tuning of the culture media has enabled us to achieve F420 production levels of up to 10 times higher compared with the wild type M. smegmatis strain. The high levels of the F420 produced in this study provide a suitable source of this cofactor for studies of F420-dependent proteins from other microorganisms and for possible biotechnological applications

Distinct Subgroups in Hypertrophic Cardiomyopathy in the NHLBI HCM Registry.

BACKGROUND: The HCMR (Hypertrophic Cardiomyopathy Registry) is a National Heart, Lung, and Blood Institute-funded, prospective registry of 2,755 patients with hypertrophic cardiomyopathy (HCM) recruited from 44 sites in 6 countries. OBJECTIVES: The authors sought to improve risk prediction in HCM by incorporating cardiac magnetic resonance (CMR), genetic, and biomarker data. METHODS: Demographic and echocardiographic data were collected. Patients underwent CMR including cine imaging, late gadolinium enhancement imaging (LGE) (replacement fibrosis), and T1 mapping for measurement of extracellular volume as a measure of interstitial fibrosis. Blood was drawn for the biomarkers N-terminal pro-B-type natriuretic peptide (NT-proBNP) and high-sensitivity cardiac troponin T (cTnT), and genetic analysis. RESULTS: A total of 2,755 patients were studied. Mean age was 49 ± 11 years, 71% were male, and 17% non-white. Mean ESC (European Society of Cardiology) risk score was 2.48 ± 0.56. Eighteen percent had a resting left ventricular outflow tract (LVOT) gradient ≥30 mm Hg. Thirty-six percent had a sarcomere mutation identified, and 50% had any LGE. Sarcomere mutation-positive patients were more likely to have reverse septal curvature morphology, LGE, and no significant resting LVOT obstruction. Those that were sarcomere mutation negative were more likely to have isolated basal septal hypertrophy, less LGE, and more LVOT obstruction. Interstitial fibrosis was present in segments both with and without LGE. Serum NT-proBNP and cTnT levels correlated with increasing LGE and extracellular volume in a graded fashion. CONCLUSIONS: The HCMR population has characteristics of low-risk HCM. Ninety-three percent had no or only mild functional limitation. Baseline data separated patients broadly into 2 categories. One group was sarcomere mutation positive and more likely had reverse septal curvature morphology, more fibrosis, but less resting obstruction, whereas the other was sarcomere mutation negative and more likely had isolated basal septal hypertrophy with obstruction, but less fibrosis. Further follow-up will allow better understanding of these subgroups and development of an improved risk prediction model incorporating all these markers

Search for B → μ μ And B0 → μ+ μ- Decays

A search for the rare decays B → μ μ and B → μ μ is performed in pp collisions at ps = 7TeV, with a data sample corresponding to an integrated luminosity of 5 fb collected by the CMS experiment at the LHC. In both decays, the number of events observed after all selection requirements is consistent with the expectation from background plus standard model signal predictions. The resulting upper limits on the branching fractions are B(B → μ μ-) < 7:7 × 10 and B(B → μ μ ) < 1:8 × 10 at 95% confidence level

Sea breezes drive currents on the inner continental shelf off southwest Western Australia

In southwest Western Australia, strong and persistent sea breezes are common between September and February. We hypothesized that on the inner continental shelf, in the absence of tidal forcing, the depth, magnitude, and lag times of the current speed and direction responses to sea breezes would vary though the water column as a function of the sea breeze intensity. To test this hypothesis, field data were used from four sites were that were in water depths of up to 13 m. Sites were located on the inner continental shelf and were on the open coast and in a semi-enclosed coastal embayment. The dominant spectral peak in currents at all sites indicated that the majority of the spectral energy contained in the currents was due to forcing by sea breezes. Currents were aligned with the local orientation of the shoreline. On a daily basis, the sea breezes resulted in increased current speeds and also changed the current directions through the water column. The correlation between wind–current speeds and directions with depth, and the lag time between the onset of the sea breeze and the response of currents, were dependent on the intensity of the sea breezes. A higher correlation between wind and current speeds occurred during strong sea breezes and was associated with shorter lag times for the response of the bottom currents. The lag times were validated with estimates of the vertical eddy viscosity. Solar heating caused the water column to stratify in summer and the sea breezes overcame this stratification. Sea breezes caused the mixed layer to deepen and the intensity of the stratification was correlated to the strength of the sea breezes. Weak sea breezes of &lt;5 m?s?1 were associated with the strongest thermal stratification of the water column, up to 1°C between the surface and bottom layers (6 and 10 m below the surface). In comparison, strong sea breezes of &gt;14 m?s?1 caused only slight thermal stratification up to 0.5°C. Apart from these effects on the vertical structure of water column, the sea breezes also influenced transport and mixing in the horizontal dimension. The sea breezes in southwest Western Australia rotated in an anticlockwise direction each day and this rotation was translated into the currents. This current rotation was more prominent in surface currents and in the coastal embayment compared to the open coast