The JCMT dense gas survey of the Perseus Molecular Cloud

We present the results of a large-scale survey of the very dense gas in the Perseus molecular cloud using HCO+ and HCN (J = 4 - 3) transitions. We have used this emission to trace the structure and kinematics of gas found in pre- and protostellar cores, as well as in outflows. We compare the HCO+/HCN data, highlighting regions where there is a marked discrepancy in the spectra of the two emission lines. We use the HCO+ to identify positively protostellar outflows and their driving sources, and present a statistical analysis of the outflow properties that we derive from this tracer. We find that the relations we calculate between the HCO+ outflow driving force and the Menv and Lbol of the driving source are comparable to those obtained from similar outflow analyses using 12CO, indicating that the two molecules give reliable estimates of outflow properties. We also compare the HCO+ and the HCN in the outflows, and find that the HCN traces only the most energetic outflows, the majority of which are driven by young Class 0 sources. We analyse the abundances of HCN and HCO+ in the particular case of the IRAS 2A outflows, and find that the HCN is much more enhanced than the HCO+ in the outflow lobes. We suggest that this is indicative of shock-enhancement of HCN along the length of the outflow; this process is not so evident for HCO+, which is largely confined to the outflow base.Comment: 25 pages, 14 figures, 9 table

Molecular Tracers of Embedded Star Formation in Ophiuchus

In this paper we analyze nine SCUBA cores in Ophiuchus using the second-lowest rotational transitions of four molecular species (12CO, 13CO, C18O, and C17O) to search for clues to the evolutionary state and star-formation activity within each core. Specifically, we look for evidence of outflows, infall, and CO depletion. The line wings in the CO spectra are used to detect outflows, spectral asymmetries in 13CO are used to determine infall characteristics, and a comparison of the dust emission (from SCUBA observations) and gas emission (from C18O) is used to determine the fractional CO freeze-out. Through comparison with Spitzer observations of protostellar sources in Ophiuchus, we discuss the usefulness of CO and its isotopologues as the sole indicators of the evolutionary state of each core. This study is an important pilot project for the JCMT Legacy Survey of the Gould Belt (GBS) and the Galactic Plane (JPS), which intend to complement the SCUBA-2 dust continuum observations with HARP observations of 12CO, 13CO, C18O, and C17O J = 3 - 2 in order to determine whether or not the cold dust clumps detected by SCUBA-2 are protostellar or starless objects. Our classification of the evolutionary state of the cores (based on molecular line maps and SCUBA observations) is in agreement with the Spitzer designation for six or seven of the nine SCUBA cores. However, several important caveats exist in the interpretation of these results, many of which large mapping surveys like the GBS may be able to overcome to provide a clearer picture of activity in crowded fields.Comment: 43 pages including 19 postscript figures. Accepted for publication in the PAS

On the ubiquity of molecular anions in the dense interstellar medium

Results are presented from a survey for molecular anions in seven nearby Galactic star-forming cores and molecular clouds. The hydrocarbon anion C6H- is detected in all seven target sources, including four sources where no anions have been previously detected: L1172, L1389, L1495B and TMC-1C. The C6H-/C6H column density ratio is greater than about 1.0% in every source, with a mean value of 3.0% (and standard deviation 0.92%). Combined with previous detections, our results show that anions are ubiquitous in dense clouds wherever C6H is present. The C6H-/C6H ratio is found to show a positive correlation with molecular hydrogen number density, and with the apparent age of the cloud. We also report the first detection of C4H- in TMC-1 (at 4.8-sigma confidence), and derive an anion-to-neutral ratio C4H-/C4H = (1.2 +- 0.4) x 10^-5 (= 0.0012 +- 0.0004%). Such a low value compared with C6H- highlights the need for a revised radiative electron attachment rate for C4H. Chemical model calculations show that the observed C4H- could be produced as a result of reactions of oxygen atoms with C5H- and C6H-

Correlated Photons from Collective Excitations of Three-Level Atomic Ensemble

We systematically study the interaction between two quantized optical fields and a cyclic atomic ensemble driven by a classic optical field. This so-called atomic cyclic ensemble consists of three-level atoms with Delta-type transitions due to the symmetry breaking, which can also be implemented in the superconducting quantum circuit by Yu-xi Liu et al. [Phys. Rev. Lett. 95, 087001 (2005)]. We explore the dynamic mechanisms to creating the quantum entanglements among photon states, and between photons and atomic collective excitations by the coherent manipulation of the atom-photon system. It is shown that the quantum information can be completely transferred from one quantized optical mode to another, and the quantum information carried by the two quantized optical fields can be stored in the collective modes of this atomic ensemble by adiabatically controlling the classic field Rabi frequencies.Comment: 10 pages, 2 figure

A Surface-Gated InSb Quantum Well Single Electron Transistor

Single electron charging effects in a surface-gated InSb/AlInSb QW structure are reported. This material, due to its large g-factor and light effective mass, offers considerable advantages over more commonly used materials, such as GaAs, for quantum information processing devices. However, differences in material and device technology result in significant processing challenges. Simple Coulomb blockade and quantised confinement models are considered to explain the observation of conductance oscillations in these structures. The charging energy is found to be comparable with the energy spectrum for single particle states

Cytotoxic Aggregation and Amyloid Formation by the Myostatin Precursor Protein

Myostatin, a negative regulator of muscle growth, has been implicated in sporadic inclusion body myositis (sIBM). sIBM is the most common age-related muscle-wastage disease with a pathogenesis similar to that of amyloid disorders such as Alzheimer's and Parkinson's diseases. Myostatin precursor protein (MstnPP) has been shown to associate with large molecular weight filamentous inclusions containing the Alzheimer's amyloid beta peptide in sIBM tissue, and MstnPP is upregulated following ER stress. The mechanism for how MstnPP contributes to disease pathogenesis is unknown. Here, we show for the first time that MstnPP is capable of forming amyloid fibrils in vitro. When MstnPP-containing Escherichia coli inclusion bodies are refolded and purified, a proportion of MstnPP spontaneously misfolds into amyloid-like aggregates as characterised by electron microscopy and binding of the amyloid-specific dye thioflavin T. When subjected to a slightly acidic pH and elevated temperature, the aggregates form straight and unbranched amyloid fibrils 15 nm in diameter and also exhibit higher order amyloid structures. Circular dichroism spectroscopy reveals that the amyloid fibrils are dominated by β-sheet and that their formation occurs via a conformational change that occurs at a physiologically relevant temperature. Importantly, MstnPP aggregates and protofibrils have a negative effect on the viability of myoblasts. These novel results show that the myostatin precursor protein is capable of forming amyloid structures in vitro with implications for a role in sIBM pathogenesis

Molecular line contamination in the SCUBA-2 450 {\mu}m and 850 {\mu}m continuum data

Observations of the dust emission using millimetre/submillimetre bolometer arrays can be contaminated by molecular line flux, such as flux from 12CO. As the brightest molecular line in the submillimetre, it is important to quantify the contribution of CO flux to the dust continuum bands. Conversion factors were used to convert molecular line integrated intensities to flux detected by bolometer arrays in mJy per beam. These factors were calculated for 12CO line integrated intensities to the SCUBA-2 850 {\mu}m and 450 {\mu}m bands. The conversion factors were then applied to HARP 12CO 3-2 maps of NGC 1333 in the Perseus complex and NGC 2071 and NGC 2024 in the Orion B molecular cloud complex to quantify the respective 12CO flux contribution to the 850 {\mu}m dust continuum emission. Sources with high molecular line contamination were analysed in further detail for molecular outflows and heating by nearby stars to determine the cause of the 12CO contribution. The majority of sources had a 12CO 3-2 flux contribution under 20 per cent. However, in regions of molecular outflows, the 12CO can dominate the source dust continuum (up to 79 per cent contamination) with 12CO fluxes reaching \sim 68 mJy per beam.Comment: Accepted 2012 April 19 for publication in MNRAS. 21 pages, 13 figures, 3 table

JHK Observations of Faint Standard Stars in the Mauna Kea Near-Infrared Photometric System

JHK photometry in the Mauna Kea Observatory (MKO) near-IR system is presented for 115 stars. Of these, 79 are UKIRT standards and 42 are LCO standards. The average brightness is 11.5 mag, with a range of 10 to 15. The average number of nights each star was observed is 4, and the average of the internal error of the final results is 0.011 mag. These JHK data agree with those reported by other groups to 0.02 mag. The measurements are used to derive transformations between the MKO JHK photometric system and the UKIRT, LCO and 2MASS systems. The 2MASS-MKO data scatter by 0.05 mag for redder stars: 2MASS-J includes H2O features in dwarfs and MKO-K includes CO features in giants. Transformations derived for stars whose spectra contain only weak features cannot give accurate transformations for objects with strong absorption features within a filter bandpasses. We find evidence of systematic effects at the 0.02 mag level in the photometry of stars with J<11 and H,K<10.5. This is due to an underestimate of the linearity correction for stars observed with the shortest exposure times; very accurate photometry of stars approaching the saturation limits of infrared detectors which are operated in double-read mode is difficult to obtain. Four stars in the sample, GSPC S705-D, FS 116 (B216-b7), FS 144 (Ser-EC84) and FS 32 (Feige 108), may be variable. 84 stars in the sample have 11< J< 15 and 10.5<H,K<15, are not suspected to be variable, and have magnitudes with an estimated error <0.027 mag; 79 of these have an error of <0.020 mag. These represent the first published high-accuracy JHK stellar photometry in the MKO photometric system; we recommend these objects be employed as primary standards for that system [abridged].Comment: Accepted for publication in MNRAS, 14 pages, 5 Figure

Phase-dependent light propagation in atomic vapors

Light propagation in an atomic medium whose coupled electronic levels form a diamond-configuration exhibits a critical dependence on the input conditions. In particular, the relative phase of the input fields gives rise to interference phenomena in the electronic excitation whose interplay with relaxation processes determines the stationary state. We integrate numerically the Maxwell-Bloch equations and observe two metastable behaviors for the relative phase of the propagating fields corresponding to two possible interference phenomena. These phenomena are associated to separate types of response along propagation, minimize dissipation, and are due to atomic coherence. These behaviors could be studied in gases of isotopes of alkali-earth atoms with zero nuclear spin, and offer new perspectives in control techniques in quantum electronics.Comment: 16 pages, 11 figures, v2: typos corrected, v3: final version, to appear in Phys. Rev.