A new type of lordosis and vertebral body compression in Gilthead seabream, Sparus aurata Linnaeus, 1758: aetiology, anatomy and consequences for survival

A new type of vertebral malformation is described, consisting of deformed cartilaginous neural and haemal processes and the compression and fusion of vertebral bodies. The malformation is designated as haemal vertebral compression and fusion (haemal VCF). We studied the aetiology of the malformations and described microanatomical histopathological alterations. The malformations were detected during routine quality control in one of six monitored Gilthead sea bream populations. Haemal VCF affected the posterior part of the vertebral column (haemal vertebrae). In 20% of the deformed specimens, haemal VCF was combined with lordosis. At 35dph (days post-hatching), early anatomical signs of the haemal VCF consisted of abnormal centrum mineralization, malformed cartilaginous neural and haemal processes and developing lordotic alterations. The histological examination of the deformed individuals revealed that haemal VCF is preceded by notochord abnormalities. The frequency of deformed individuals was three times higher at 35 than at 61dph (50.3% vs. 17.2%, n=157 and n=250, respectively). No signs of repair or reversion of malformations have been observed. Thus, the steep decrease in deformities in older animals suggests that haemal VCF is linked to high mortality rates. The results are discussed in respect of the possible causative factors of haemal VCF

Visual analysis of document triage data

As part of the information seeking process, a large amount of effort is invested in order to study and understand how information seekers search through documents such that they can assess their relevance. This search and assessment of document relevance, known as document triage, is an important information seeking process, but is not yet well understood. Human-computer interaction (HCI) and digital library scientists have undertaken a series of user studies involving information seeking, collected a large amount of data describing information seekers' behavior during document search. Next to this, we have witnessed a rapid increase in the number of off-the-shelf visualization tools which can benefit document triage study. Here we set out to utilize existing information visualization techniques and tools in order to gain a better understanding of the large amount of user-study data collected by HCI and digital library researchers. We describe the range of available tools and visualizations we use in order to increase our knowledge of document triage. Treemap, parallel coordinates, stack graph, matrix chart, as well as other visualization methods, prove to be insightful in exploring, analyzing and presenting user behavior during document triage. Our findings and visualizations are evaluated by HCI and digital library researchers studying this proble

Elliptic flow fluctuations in 200 GeV Au+Au collisions at RHIC

We present first results on event-by-event elliptic flow fluctuations in Au+Au collisions at 200 GeV obtained with the PHOBOS detector. Over the measured range in centrality, large relative fluctuations of 40--50% are found. The elliptic flow fluctuations are well described as being proportional to fluctuations in the shape of the initial collision region, as estimated event-by-event with the participant eccentricity using Glauber Monte Carlo.Comment: 5 pages, 2 figures, QM 2006 proceedings; v2: Corrected a few typo

Direct photons ~basis for characterizing heavy ion collisions~

After years of experimental and theoretical efforts, direct photons become a strong and reliable tool to establish the basic characteristics of a hot and dense matter produced in heavy ion collisions. The recent direct photon measurements are reviewed and a future prospect is given.Comment: 8 pages, 8 figures, Invited plenary talk at Quark Matter 200

Search for lepton lavour violation in e+p collisions at HERA

A search for the lepton flavour violating processes ep->mu X and ep -> tau X is performed with the H1 experiment at HERA. Final states with a muon or tau and a hadronic jet are searched for in a data sample corresponding to an integrated luminosity of 66.5 pb-1 for e^+ p collisions and 13.7 pb^-1 for e^- p collisions at a centre-of-mass energy of 319 GeV. No evidence for lepton flavour violation is found. Limits are derived on the mass and the couplings of leptoquarks inducing lepton flavour violation in an extension of the Buchm"uller-R"uckl-Wyler effective model. Leptoquarks produced in ep collisions with a coupling strength of lambda=0.3 and decaying with the same coupling strength to a muon-quark pair or a tau-quark pair are excluded at 95% confidence level up to masses of 459 GeV and 379 GeV, respectively

High transverse momentum suppression and surface effects in Cu+Cu and Au+Au collisions within the PQM model

We study parton suppression effects in heavy-ion collisions within the Parton Quenching Model (PQM). After a brief summary of the main features of the model, we present comparisons of calculations for the nuclear modification and the away-side suppression factor to data in Au+Au and Cu+Cu collisions at 200 GeV. We discuss properties of light hadron probes and their sensitivity to the medium density within the PQM Monte Carlo framework.Comment: Comments: 6 pages, 8 figures. To appear in the proceedings of Hot Quarks 2006: Workshop for Young Scientists on the Physics of Ultrarelativistic Nucleus-Nucleus Collisions, Villasimius, Italy, 15-20 May 200

First operational experience with the CMS Run Control System

The Run Control System of the Compact Muon Solenoid (CMS) experiment at CERN's new Large Hadron Collider (LHC) controls the sub-detector and central data acquisition systems and the high-level trigger farm of the experiment. It manages around 10,000 applications that control custom hardware or handle the event building and the high-level trigger processing. The CMS Run Control System is a distributed Java system running on a set of Apache Tomcat servlet containers. Users interact with the system through a web browser. The paper presents the architecture of the CMS Run Control System and deals with operational aspects during the first phase of operation with colliding beams. In particular it focuses on performance, stability, integration with the CMS Detector Control System, integration with LHC status information and tools to guide the shifter.United States. Dept. of EnergyNational Science Foundation (U.S.)European Community. Marie-Curie Research Network

The Importance of Correlations and Fluctuations on the Initial Source Eccentricity in High-Energy Nucleus-Nucleus Collisions

In this paper, we investigate various ways of defining the initial source eccentricity using the Monte Carlo Glauber (MCG) approach. In particular, we examine the participant eccentricity, which quantifies the eccentricity of the initial source shape by the major axes of the ellipse formed by the interaction points of the participating nucleons. We show that reasonable variation of the density parameters in the Glauber calculation, as well as variations in how matter production is modeled, do not significantly modify the already established behavior of the participant eccentricity as a function of collision centrality. Focusing on event-by-event fluctuations and correlations of the distributions of participating nucleons we demonstrate that, depending on the achieved event-plane resolution, fluctuations in the elliptic flow magnitude $v_2$ lead to most measurements being sensitive to the root-mean-square, rather than the mean of the $v_2$ distribution. Neglecting correlations among participants, we derive analytical expressions for the participant eccentricity cumulants as a function of the number of participating nucleons, \Npart,keeping non-negligible contributions up to \ordof{1/\Npart^3}. We find that the derived expressions yield the same results as obtained from mixed-event MCG calculations which remove the correlations stemming from the nuclear collision process. Most importantly, we conclude from the comparison with MCG calculations that the fourth order participant eccentricity cumulant does not approach the spatial anisotropy obtained assuming a smooth nuclear matter distribution. In particular, for the Cu+Cu system, these quantities deviate from each other by almost a factor of two over a wide range in centrality.Comment: 18 pages, 10 figures, submitted to PR

Applicability of Monte Carlo Glauber models to relativistic heavy ion collision data

The accuracy of Monte Carlo Glauber model descriptions of minimum-bias multiplicity frequency distributions is evaluated using data from the Relativistic Heavy Ion Collider (RHIC) within the context of a sensitive, power-law representation introduced previously by Trainor and Prindle (TP). Uncertainties in the Glauber model input and in the mid-rapidity multiplicity frequency distribution data are reviewed and estimated using the TP centrality methodology. The resulting errors in model-dependent geometrical quantities used to characterize heavy ion collisions ({\em i.e.} impact parameter, number of nucleon participants $N_{part}$, number of binary interactions $N_{bin}$, and average number of binary collisions per incident participant nucleon $\nu$) are presented for minimum-bias Au-Au collisions at $\sqrt{s_{NN}}$ = 20, 62, 130 and 200 GeV and Cu-Cu collisions at $\sqrt{s_{NN}}$ = 62 and 200 GeV. Considerable improvement in the accuracy of collision geometry quantities is obtained compared to previous Monte Carlo Glauber model studies, confirming the TP conclusions. The present analysis provides a comprehensive list of the sources of uncertainty and the resulting errors in the above geometrical collision quantities as functions of centrality. The capability of energy deposition data from trigger detectors to enable further improvements in the accuracy of collision geometry quantities is also discussed.Comment: 27 pages, 4 figures, 11 table

Anisotropic flow of charged particles at sNN=2.76\mathbf{\sqrt{s_{NN}} = 2.76} TeV measured with the ALICE detector

Measurements of anisotropic flow in heavy-ion collisions provide evidence for the creation of strongly interacting matter which appears to behave as an almost ideal fluid. Anisotropic flow signals the presence of multiple interactions and is very sensitive to the initial spatial anisotropy of the overlap region in non-central heavy-ion collisions. In this article we report measurements of elliptic $v_2$, triangular $v_3$, quadrangular $v_4$ and pentagonal $v_5$ flow. These measurements have been performed with 2- and multi-particle correlation techniques.Comment: 4 pages, 4 figures, Quark Matter 2011 proceeding