Algorithm and performance of a clinical IMRT beam-angle optimization system

This paper describes the algorithm and examines the performance of an IMRT beam-angle optimization (BAO) system. In this algorithm successive sets of beam angles are selected from a set of predefined directions using a fast simulated annealing (FSA) algorithm. An IMRT beam-profile optimization is performed on each generated set of beams. The IMRT optimization is accelerated by using a fast dose calculation method that utilizes a precomputed dose kernel. A compact kernel is constructed for each of the predefined beams prior to starting the FSA algorithm. The IMRT optimizations during the BAO are then performed using these kernels in a fast dose calculation engine. This technique allows the IMRT optimization to be performed more than two orders of magnitude faster than a similar optimization that uses a convolution dose calculation engine.Comment: Final version that appeared in Phys. Med. Biol. 48 (2003) 3191-3212. Original EPS figures have been converted to PNG files due to size limi

A VMAT planning solution for prostate patients using a commercial treatment planning system

Volumetric modulated arc therapy (VMAT) is a rotational delivery technique which offers the potential of improved dose distributions and shorter treatment times when compared to fixed-beam intensity-modulated radiation therapy (IMRT). This note describes the use of an existing treatment planning system (Philips Pinnacle 3 v.8.0), supplemented by in-house software, to produce a single-arc VMAT prostate plan. While a number of planning systems for the Elekta VMAT platform are commercially available, the use of an in-house solution has allowed more detailed investigations of VMAT planning, as well as greater control over the optimization process. The solution presented here begins with a static step-and-shoot IMRT approach to provide initial segment shapes, which are then modified and sequenced into 60 equally spaced control points in a 360° arc. Dose-volume histogram comparisons demonstrate that this VMAT planning method offers multiple dose level target coverage comparable to that from a standard IMRT approach. The VMAT plans also show superior sparing of critical structures such as the rectum and bladder. Delivery times are reduced with the VMAT method, and the results of dosimetric verification, resilience and repeatability tests indicate that the solution is robust. © 2010 Institute of Physics and Engineering in Medicine

What is theoretical progress of science?

The epistemic conception of scientific progress equates progress with accumulation of scientific knowledge. I argue that the epistemic conception fails to fully capture scientific progress: theoretical progress, in particular, can transcend scientific knowledge in important ways. Sometimes theoretical progress can be a matter of new theories ‘latching better onto unobservable reality’ in a way that need not be a matter of new knowledge. Recognising this further dimension of theoretical progress is particularly significant for understanding scientific realism, since realism is naturally construed as the claim that science makes theoretical progress. Some prominent realist positions (regarding fundamental physics, in particular) are best understood in terms of commitment to theoretical progress that cannot be equated with accumulation of scientific knowledge

The use of a realistic VMAT delivery emulator to optimize dynamic machine parameters for improved treatment efficiency

The delivery of volumetric modulated arc therapy (VMAT) requires the simultaneous movement of the linear accelerator gantry, multi-leaf collimators and jaws while the dose rate is varied. In this study, a VMAT delivery emulator was developed to accurately predict the characteristics of a given treatment plan, incorporating realistic parameters for gantry inertia and the variation in leaf speed with respect to gravity. The emulator was used to assess the impact of dynamic machine parameters on the delivery efficiency, using a set of prostate and head and neck VMAT plans. Initially, assuming a VMAT system with fixed dose rate bins, the allowable leaf and jaw speeds were increased and a significant improvement in treatment time and average dose rate was observed. The software was then adapted to simulate a VMAT system with continuously varying dose rate, and the increase in delivery efficiency was quantified, along with the impact of an increased leaf and jaw speed. Finally, a set of optimal dynamic machine parameters was derived assuming an idealized scenario in which the treatment is delivered in a single arc at constant maximum gantry speed. © 2011 Institute of Physics and Engineering in Medicine

On Component Forces in Physics: A Pragmatic View

Do component forces exist? I argue that the answer lies in the affirmative, on historical and operational grounds

Environmental drivers, spatiotemporal dynamics, and pollination effectiveness of insect floral visitors in Australian seed carrot agroecosystems

Hybrid cropping systems generally depend on insect pollinators to produce high quality yields. In this study, we identified the floral insect community of Australian carrot agroecosystems and evaluated how the location of plants within fields and select environmental conditions (temperature, relative humidity) impacted visitor abundance to carrot flowers. We further evaluated the pollination effectiveness of select insect visitors based on the time of day the pollination event took place. Out of 26,083 carrot floral visitors observed, we identified 52 different insects (33 species and 19 morphospecies) from 26 families. Of these visitors, 86 % belonged to the families Coccinellidae (Coleoptera), Apidae (Hymenoptera), Halictidae (Hymenoptera), and Syrphidae (Diptera). Wild variegated lady beetles (Hippodamia variegata Goeze, 1777) were the most abundant floral visitor observed on hybrid parent lines, while European honey bees (Apis mellifera Linnaeus, 1758) were the most abundant visitor of open-pollinated lines. The abundance of common bee, beetle, and fly taxa differed throughout the day (range: 05:00–17:00) based on temperature (10.5ºC to 39.5ºC) and relative humidity (19.7 %–94.7 %). Further, temporal complementary was observed in measures of pollination performance as A. mellifera and the European drone fly, Eristalis tenax (Linnaeus, 1758), deposited more pollen grains onto hybrid carrot floral stigmas compared to the native halictid bee Lasioglossum cognatum (Smith, 1853) before 12:00 (05:00–12:00), while L. cognatum deposited more pollen grains onto flowers compared to A. mellifera and E. tenax after 12:00 (12:00 and 17:00). The results of this study imply that integrated management practices to support the resource needs of wild bee and fly taxa can potentially provide increased pollination services to carrot seed crops

The influence of training load, exposure to match play and sleep duration on daily wellbeing measures in youth athletes

This study assessed the influence of training load, exposure to match play and sleep duration on two daily wellbeing measures in youth athletes. Forty-eight youth athletes (age 17.3 ± 0.5 years) completed a daily wellbeing questionnaire (DWB), the Perceived Recovery Status scale (PRS), and provided details on the previous day’s training loads (TL) and self-reported sleep duration (sleep) every day for 13 weeks (n = 2727). Linear mixed models assessed the effect of TL, exposure to match play and sleep on DWB and PRS. An increase in TL had a most likely small effect on muscle soreness (d = −0.43;± 0.10) and PRS (d = −0.37;± 0.09). Match play had a likely small additive effect on muscle soreness (d = −0.26;± 0.09) and PRS (d = −0.25;± 0.08). An increase in sleep had a most likely moderate effect on sleep quality (d = 0.80;± 0.14); a most likely small effect on DWB (d = 0.45;± 0.09) and fatigue (d = 0.42;± 0.11); and a likely small effect on PRS (d = 0.25;± 0.09). All other effects were trivial or did not reach the pre-determined threshold for practical significance. The influence of sleep on multiple DWB subscales and the PRS suggests that practitioners should consider the recovery of an athlete alongside the training stress imposed when considering deviations in wellbeing measures

Protein and Overtraining: Potential Applications for Free-Living Athletes

Despite a more than adequate protein intake in the general population, athletes have special needs and situations that bring it to the forefront. Overtraining is one example. Hard-training athletes are different from sedentary persons from the sub-cellular to whole-organism level. Moreover, competitive, "free-living" (less-monitored) athletes often encounter negative energy balance, sub-optimal dietary variety, injuries, endocrine exacerbations and immune depression. These factors, coupled with "two-a-day" practices and in-season demands require that protein not be dismissed as automatically adequate or worse, deleterious to health. When applying research to practice settings, one should consider methodological aspects such as population specificity and control variables such as energy balance. This review will address data pertinent to the topic of athletic protein needs, particularly from a standpoint of overtraining and soft tissue recovery. Research-driven strategies for adjusting nutrition and exercise assessments will be offered for consideration. Potentially helpful nutrition interventions for preventing and treating training complications will also be presented

A Fragment of the LG3 Peptide of Endorepellin Is Present in the Urine of Physically Active Mining Workers: A Potential Marker of Physical Activity

Biomarker analysis has been implemented in sports research in an attempt to monitor the effects of exertion and fatigue in athletes. This study proposed that while such biomarkers may be useful for monitoring injury risk in workers, proteomic approaches might also be utilised to identify novel exertion or injury markers. We found that urinary urea and cortisol levels were significantly elevated in mining workers following a 12 hour overnight shift. These levels failed to return to baseline over 24 h in the more active maintenance crew compared to truck drivers (operators) suggesting a lack of recovery between shifts. Use of a SELDI-TOF MS approach to detect novel exertion or injury markers revealed a spectral feature which was associated with workers in both work categories who were engaged in higher levels of physical activity. This feature was identified as the LG3 peptide, a C-terminal fragment of the anti-angiogenic/anti-tumourigenic protein endorepellin. This finding suggests that urinary LG3 peptide may be a biomarker of physical activity. It is also possible that the activity mediated release of LG3/endorepellin into the circulation may represent a biological mechanism for the known inverse association between physical activity and cancer risk/survival