39 research outputs found
Effect of water composition on perchlorate removal from polluted ground- water using Ion Exchange Membrane Bioreactor
Perchlorate contamination of ground water is a worldwide concern. At several sites in Israel\u27s coastal aquifer, hundreds of ppm of perchlorate was found accompanied with significant concentrations of nitrate and chlorate, consequently preventing water production from wells in the area. The IEMB hybrid process [1] allows safe treatment of high perchlorate (and nitrate and chlorate) contaminated groundwater. The Donnan dialysis process removes the perchlorate from the water compartment using an anion exchange membrane (AEM) to the bio-compartment where it undergoes microbial degradation to much safer components such as chloride. The AEM acts as a barrier and keeps both compartments completely separate. Glycerol is used as an exogenous carbon and electron source for the biodegradation process [2]. This arrangement keeps the carbon source, reaction byproducts and bacteria confined in the bio-reactor thus preventing the contamination of the treated water. The present study examines the performance of the IEMB in removing perchlorate and other anions (nitrate and chlorate) at levels of hundreds mg L-1 from polluted ground water from the Ramat HaSharon (RHGW) contaminated site. The IEMB removal of the polluting anions was studied initially for synthetic and actual ground water fed to the water side while feeding 0.1 N of NaCl to the bio-compartment. We further studied the effect of adding bacteria and bio-media to the bio-compartment. In all experiment setups it is obvious that perchlorate dominates the flux across the AEM. Even though perchlorate concentration is considerably lower than nitrate and chlorate, its flux is greater than the sum of the other anion fluxes. At an effective driving force (EDF) value above 0.7 [mM] perchlorate had a negative effect on the other anions transport across the membrane. Adding bacteria to bio-compartment side fed with RHGW and bio-media increased anions total flux by 15%-23% at the first two runs. A thick biofilm has developed on the membrane bio-side during the following two runs, resulting in a total flux decline of 18%-22% when compared to the pure Donnan dialysis experiment. Throughout all the bio-degradation experiment regardless of the anion load to the bio-compartment the bio-degradation efficiency of the trace anions was above 99%. This study is the first to treat highly polluted complex ground water in an IEMB. It further established the perchlorate strong interaction with the AEM, consequently affecting the flux of other anions in the treatment process. This research is the basis for upscaling the IEMB technology into the field
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Investigating the enigma of an irregular groundwater age pattern in a confined, presumed “fossil” complex aquifer through mixing cell flow modeling
Significant fluctuations in the groundwater (GW) age along the eastern flow path of the Nubian Sandstone Aquifer's (NSA), as derived from Krypton-81 groundwater dating, have suggested that this aquifer, located in Israel's Negev Desert and previously presumed to be a fossil, is not entirely isolated but mixes with younger and even recent water. The intermittent rejuvenation and drastic increases in the GW age across short distances most likely imply hydraulic connectivity with the surrounding aquifers, which contribute both younger and more ancient water to the NSA. The current study aims at modeling the GW flow system to locate and quantify its water sources despite the aquifer's hydrogeological complexity and the scarcity of hydrological data. We implemented the Mixing Cell Modeling (MCM) approach, understanding that the alternating rejuvenations and increases in the GW age downstream of the NSA's eastern flow trajectory reflect the mixing of the NSA's groundwater with young and old GW bodies, respectively. Thus, prompted by the 81Kr water age distribution, yet independent of the Kr radioisotope data, a multi-tracer mixing cell flow model was adopted based on a set of balance equations of water, dissolved minerals, and stable environmental isotopes. The findings indicate that (1) there is a small, yet substantial, intrusion of old brackish GW from a deep-seated, highly pressurized aquifer into the NSA in the northeastern Negev; (2) the rejuvenation of GW in the NSA is due to significant mixing with water from nearby overlying carbonate and chert aquifers, and (3) the NSA is substantially replenished through the Nubian Sandstone (NS) outcrops along the Negev Desert anticlines. Most GW intrusions into the NSA occur near the intersections of the eastern flow path with some of the Negev's major faults and synclines, such as the Paran and Ramon Fault zones and the Zin Syncline. In light of the relatively young GW age at the end of the NSA's western flow path in the northern Negev, and based on the similarities in the hydrogeological structures in the Negev and northern Sinai Deserts, we propose that similar mixing processes with GW from the overlying carbonate aquifers and direct GW recharge through the NS outcrops also occur in the northern Sinai Peninsula. The approach presented in this study might apply to examining recharge processes and hydraulic connectivity in other aquifers that were formerly classified as “fossil,” such as the immense NSA found in the Arabian (Jordan & Saudi Arabia) and the Western (Egypt) Deserts
Visualization of both proximal M2-MCA segments in patients (the Tilted-V Sign) with acute M1-MCA occlusion stroke is associated with better procedural and prognostic outcomes
IntroductionWe aimed to assess the clinical significance of M1-MCA occlusion with visualization of both MCA-M2 segments [“Tilted-V sign” (TVS)] on initial CT angiography (CTA) in patients with acute ischemic stroke (AIS) undergoing endovascular thrombectomy (EVT).MethodsData for patients with consecutive AIS undergoing EVT for large vessel occlusion (LVO) in two academic centers are recorded in ongoing databases. Patients who underwent EVT for M1-MCA occlusions ≤ 6 h from symptom onset were included in this retrospective analysis.ResultsA total of 346 patients met the inclusion criteria; 189 (55%) had positive TVS. Patients with positive TVS were younger (68 ± 14 vs. 71 ± 14 years, P = 0.028), with similar rates of vascular risk factors and baseline modified Rankin scores (mRS) 0–2. The rates of achieving thrombolysis in cerebral ischemia (TICI) 2b-3 were similar to the two groups (79%), although successful first-pass recanalization was more common with TVS (64 vs. 36%, p = 0.01). On multivariate analysis, higher collateral score [odds ratio (OR) 1.38 per unit increase, p = 0.008] and lower age (OR 0.98 per year increase, p = 0.046) were significant predictors of TVS. Patients with positive TVS had higher post-procedural Alberta Stroke Program Early CT Score (ASPECTS; 6.9 ± 2.2 vs. 5.2 ± 2.3, p = 0.001), were discharged with lower National Institutes of Health Stroke Score (NIHSS; 6±6 vs. 9±7, p = 0.003) and higher rates of mRS 0–2 (29.5 vs. 12%, p = 0.001), and had lower rates of 90-day mortality (13.2 vs. 21.6%, p = 0.038). However, TVS was not an independent predictor of functional independence (OR 2.51; 95% CI 0.7–8.3).ConclusionTilted-V Sign, an easily identifiable radiological marker, is associated with fewer recanalization attempts, better functional outcomes, and reduced mortality
Shifting the limits in wheat research and breeding using a fully annotated reference genome
Introduction:
Wheat (Triticum aestivum L.) is the most widely cultivated crop on Earth, contributing about a fifth of the total calories consumed by humans. Consequently, wheat yields and production affect the global economy, and failed harvests can lead to social unrest. Breeders continuously strive to develop improved varieties by fine-tuning genetically complex yield and end-use quality parameters while maintaining stable yields and adapting the crop to regionally specific biotic and abiotic stresses.
Rationale:
Breeding efforts are limited by insufficient knowledge and understanding of wheat biology and the molecular basis of central agronomic traits. To meet the demands of human population growth, there is an urgent need for wheat research and breeding to accelerate genetic gain as well as to increase and protect wheat yield and quality traits. In other plant and animal species, access to a fully annotated and ordered genome sequence, including regulatory sequences and genome-diversity information, has promoted the development of systematic and more time-efficient approaches for the selection and understanding of important traits. Wheat has lagged behind, primarily owing to the challenges of assembling a genome that is more than five times as large as the human genome, polyploid, and complex, containing more than 85% repetitive DNA. To provide a foundation for improvement through molecular breeding, in 2005, the International Wheat Genome Sequencing Consortium set out to deliver a high-quality annotated reference genome sequence of bread wheat.
Results:
An annotated reference sequence representing the hexaploid bread wheat genome in the form of 21 chromosome-like sequence assemblies has now been delivered, giving access to 107,891 high-confidence genes, including their genomic context of regulatory sequences. This assembly enabled the discovery of tissue- and developmental stage–related gene coexpression networks using a transcriptome atlas representing all stages of wheat development. The dynamics of change in complex gene families involved in environmental adaptation and end-use quality were revealed at subgenome resolution and contextualized to known agronomic single-gene or quantitative trait loci. Aspects of the future value of the annotated assembly for molecular breeding and research were exemplarily illustrated by resolving the genetic basis of a quantitative trait locus conferring resistance to abiotic stress and insect damage as well as by serving as the basis for genome editing of the flowering-time trait.
Conclusion:
This annotated reference sequence of wheat is a resource that can now drive disruptive innovation in wheat improvement, as this community resource establishes the foundation for accelerating wheat research and application through improved understanding of wheat biology and genomics-assisted breeding. Importantly, the bioinformatics capacity developed for model-organism genomes will facilitate a better understanding of the wheat genome as a result of the high-quality chromosome-based genome assembly. By necessity, breeders work with the genome at the whole chromosome level, as each new cross involves the modification of genome-wide gene networks that control the expression of complex traits such as yield. With the annotated and ordered reference genome sequence in place, researchers and breeders can now easily access sequence-level information to precisely define the necessary changes in the genomes for breeding programs. This will be realized through the implementation of new DNA marker platforms and targeted breeding technologies, including genome editing
The Emergence of Antibiotics Resistance Genes, Bacteria, and Micropollutants in Grey Wastewater
The reuse of household greywater is increasing globally. Wastewater and greywater treatment processes are not fully effective in removing all contaminants, such as emerging micropollutants, antimicrobial-resistant bacteria, and antibiotic resistance genes. The dynamics between emerging micropollutants and antibiotic resistance genes in greywater treatment systems are complex. Thus, this review aims to analyze the current knowledge on sources, spread, and the fate of emerging micropollutants, antibiotic-resistance genes, and antimicrobial-resistant bacteria in microbial communities of greywater and downstream recipients. The fate of antimicrobial resistance and emerging micropollutants from greywater in the environment has not been determined. More studies are needed to identify the mechanism/s involved in the degradation of emerging micropollutants and the presence of transformation pathways in the microbial metagenome. In the review, we aim to describe the link between the persistence of emerging micropollutants and the emergence of antimicrobial resistance. We showed that the effect of irrigation with treated wastewater was variable. In addition, we tried to summarize the impact of emerging micropollutants on bacteria and their fate in the soil microbiome, demonstrating that emerging micropollutants induce changes in the diversity of soil bacteria. The fate and transport of emerging micropollutants, antimicrobial-resistant bacteria, and antibiotic resistance genes can vary with soil properties. It is, therefore, necessary to better understand how widely antibiotic-resistance genes are disseminated
Biological Treatment of Nitroaromatics in Wastewater
Nitroaromatic compounds (NACs), which are widely used in pesticides, explosives, dyes, and pharmaceuticals, include nitrobenzene, nitrotoluenes, nitrophenols, and nitrobenzoates. They are also significant industrial pollutants in the environment. These substances, as well as their derivatives, frequently have toxic or mutagenic properties. Wastewater containing nitroaromatic compounds can be effectively managed by using biological treatment methods that are accessible, cost-effective, and environmentally friendly. This review highlights the latest developments in biological treatment systems for removing NACs from wastewater. The large-scale implementation of biological treatment systems will be facilitated by future studies that focus on identifying the best operational methods and that determine how co-pollutants impact the removal of NACs from wastewater
Effects of Perchlorate and Other Groundwater Inorganic Co-Contaminants on Aerobic RDX Degradation
Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) pollution is accompanied by other co-contaminants, such as perchlorate and chlorates, which can retard biodegradation. The effects of perchlorate and chlorate on aerobic RDX degradation remain unclear. We hypothesized that they have a negative or no impact on aerobic RDX-degrading bacteria. We used three aerobic RDX-degrading strains—Rhodococcus strains YH1 and T7 and Gordonia YY1—to examine this hypothesis. The strains were exposed to perchlorate, chlorate, and nitrate as single components or in a mixture. Their growth, degradation activity, and gene expression were monitored. Strain-specific responses to the co-contaminants were observed: enhanced growth of strain YH1 and inhibition of strain T7. Vmax and Km of cytochrome P450 (XplA) in the presence of the co-contaminants were not significantly different from the control, suggesting no direct influence on cytochrome P450. Surprisingly, xplA expression increased fourfold in cultures pre-grown on RDX and, after washing, transferred to a medium containing only perchlorate. This culture did not grow, but xplA was translated and active, albeit at lower levels than in the control. We explained this observation as being due to nitrogen limitation in the culture and not due to perchlorate induction. Our results suggest that the aerobic strain YH1 is effective for aerobic remediation of RDX in groundwater
Antibiotic-Resistant Bacteria in Greywater and Greywater-Irrigated Soils
This study represents the first systematic attempt to evaluate antibiotic-resistant bacteria (ARB) occurrence in treated greywater and the potential spread of these bacteria from the greywater to greywater-irrigated soil. Treated greywater from three recirculating vertical flow constructed wetlands, each located in a household in the central Negev Desert, Israel, was surveyed. The presence of antibiotic-resistant bacteria in raw and treated greywater was investigated with culture and molecular methods, as well as their presence in the corresponding treated-greywater-irrigated soils. Additionally, the effectiveness of chlorination to prevent the spread of ARB was tested. The total count of tetracycline-resistant bacteria significantly increased in the treated greywater, likely due to their concentration on the filter matrix of the treatment systems. Twenty-four strains of tetracycline-resistant bacteria were isolated and identified at the genus level by 16Sr RNA gene sequencing. All the tetracycline-resistant bacteria showed high resistance traits, and some of them presented multiple antibiotic resistances. Six tetracycline resistance genes (coding for efflux and ribosomal resistance mechanisms) and five β-lactamase genes were detected. In 14 of the isolated strains, the gene tet39, which is phylogenetically related to both environmental and clinical strains, was identified. All the tet39 resistant bacteria were positive to at least one of the β-lactamase genes tested. Chlorination was found to be an efficient method to reduce ARB in treated greywater. We concluded that disinfection of treated greywater may reduce the risks not only from the potential presence of pathogens but also from the presence of ARB and antibiotic resistance genes