The use of different otolith-shape analyses for stock discrimination of Yellowtail Snapper Ocyurus chrysurus, (Bloch, 1791) in the coastal waters of northeastern Brazil

In this study, the otolith morphology of yellowtail snapper (Ocyurus chrysurus) was used for stock identification based on different shape analyses viz. morphometric parameters with shape indices, Elliptical Fourier descriptors (EFD), wavelet transform (WT), and landmarks. The samples were collected from Fortaleza (Ceará) and Recife (Pernambuco) in the coastal waters of Brazil to identify stocks and determine the best method for stock discrimination of O. chrysurus. The result showed no significant difference between these two regions which was supported by the Linear Discriminant Analysis (LDA). To select the best discrimination methods a correct classification through jack-knifed and Wilks’ ? test was performed. The morphometric parameters with shape indices showed a correct classification of 25% and the landmark method's correct classi?cation was 33.1%. These two methods had a lower correct classi?cation than the otolith contouring methods (EFD = 42.3% and WT = 43.5%). Also, the Wilks’ ? test showed lower power discrimination for morphometric with shape indices and landmark method (?= 0.904 and ?= 0.808, respectively), in comparison with the two contouring methods (EFD ? = 0.688 and WT ? = 0.601). These results indicate that the most suitable methods for observing small variations in O. chrysurus otoliths can be EFD and WT

Patrones de desove de peces de arrecife comercialmente importantes (Lutjanidae y Serranidae) en el Atlántico tropical suroccidental

Although information on the spawning seasons of commercially important snappers (Lutjanidae) and groupers (Serranidae, subfamily Epinephelinae) is available for the north and central west Atlantic, there is little information for the tropical western South Atlantic (Brazil). As a consequence, there are few fishery regulations in this entire region that take into consideration such information. In this study, we characterized the reproductive cycles of three Epinephelinae serranids (Epinephelus morio, Mycteroperca bonaci and Cephalopholis fulva) and five lutjanids (Lutjanus synagris, L. jocu, L. analis, Ocyurus chrysurus and Rhomboplites aurorubens) that occur in the Abrolhos Bank, Brazil, the largest reef complex in the tropical western South Atlantic. A total of 3528 gonads were collected from May 2005 to October 2007. Temporal variability in spawning patterns was evaluated using the Gonadosomatic Index (GSI) and macroscopic analyses. The peak of reproductive activity for the three grouper species occurred between July and August. Snappers exhibited two peaks of reproductive activity, the more intense of which occurred between September and October. The other peak occurred between February and March, with the exception of the deep-dwelling species R. aurorubens, which only reproduced between February and March. Seasonal patterns were consistent over the two consecutive years that we studied, and these patterns are equivalent to those observed for the Northern Hemisphere, as are the sizes at maturity and at the time of sexual change (for the three protogynous hermaphrodite groupers). Fisheries management in this region could be significantly improved by a combination of catch and effort limitations being imposed during spawning seasons and by overall size limitations, particularly considering that most of the fish caught are generally below size at maturity. The proposed buffer zones for the marine areas that are presently protected in Abrolhos represent an opportunity for implementing both spatial (e.g. setting no-take zones that cover spawning sites) and temporal (e.g. seasonal closures during spawning peaks) management tools, using a participatory approach at the regional scale.A pesar de que se tiene un buen conocimiento sobre la época de freza de los pargos (Lutjanidae) y los meros (Serranidae, subfamilia Epinephelinae) en las zonas norte y central del Atlántico occidental, la información disponible del Atlántico suroccidental es escasa. Como consecuencia, en esta zona aún existen pocas regulaciones pesqueras que tengan en cuenta esta información. En este estudio se caracterizan los ciclos reproductores de tres serránidos Epinephelinae (Epinephelus morio, Mycteroperca bonaci and Cephalopholis fulva) y cinco pargos (Lutjanus synagris, L. jocu, L. analis, Ocyurus chrysurus and Rhomboplites aurorubens) en el Banco de Abrolhos, el mayor complejo de arrecifes del Atlántico suroccidental. Se examinaron un total de 3528 gónadas entre mayo de 2005 y octubre de 2007. La variabilidad temporal de las pautas de puesta se evaluó mediante el Índice Gonadosomático (GSI) y análisis microscópicos. Para los tres meros el máximo en la actividad reproductora se produce entre julio y agosto. Los lutjánidos presentan dos picos de actividad bien diferenciados, siendo el más intenso el que tiene lugar entre septiembre y octubre, mientras que el menor se produce entre febrero y marzo, con la excepción de R. aurorubens, una especie de profundidad, que sólo se reproduce entre febrero y marzo. Las pautas estacionales en la reproducción son consistentes en los dos años consecutivos y, junto a la edad de primera madurez y la edad de inversión sexual (los tres meros son hermafroditas proterogínicos), son equivalentes a las que se producen en el hemisferio septentrional. La gestión pesquera en esta región podría mejorar significativamente mediante una combinación de limitaciones en las capturas y en el esfuerzo durante las épocas de puesta, así como limitando la talla mínima de captura, considerando que la mayoría de individuos capturados actualmente son inmaduros. Las zonas de amortiguación de las áreas marinas actualmente protegidas en Abrolhos representan una buena oportunidad para implementar herramientas de gestión tanto espaciales (e.g. estableciendo zonas de exclusión pesquera en los lugares de freza) como temporales (e.g. prohibiendo la pesca durante la época de reproducción), utilizando una aproximación participativa a una escala regional

Spatial and temporal dynamics of the abundance of crustose calcareous algae on the southernmost coral reefs of the western Atlantic (Abrolhos Bank, Brazil)

Crustose calcareous algae (CCA) constitute one of the main reef builders on the Abrolhos Bank, Brazil. Once CCA taxonomy is locally understood, differences in growth-forms may be useful for the delimitation of taxa using characteristics such as the presence or absence of surface protuberances. Here, growth-forms were used to identify and quantify the most common CCA taxa on the shallow reefs (3-10 m) of the Abrolhos Bank to determine possible changes in the CCA community over a period of 10 years, and the ecological significance of CCA to local reefs was interpreted. The CCA assemblages were surveyed from 2006-2015 by using fixed photoquadrats at four sites in the inner (10-20 km from the mainland) and mid-shelf reefs (40-75 km from the mainland). The five most common CCA taxa were Pneophyllum conicum, the Lithophyllum kaiserii / Lithophyllum sp. complex, Melyvonnea erubescens, the Hydrolithon boergesenii / Porolithon onkodes complex and Peyssonelia sp. The overall mean CCA cover on the reefs was 20%. A comparison with a previous monitoring study in the same region indicated that the CCA cover nearly doubled from 2003-2008 to 2006-2015. This study reveals that the coral-killing species P. conicum dominated CCA flora on the shallow Abrolhos reefs in the last decade, and the local specific abundance of CCA slightly fluctuated over time and was species-and site-specific. The information obtained in this study contributes to the understanding of the ecology of the key calcifying components of the Abrolhos reefs and provides a useful baseline for exploring the responses of CCA to future environmental changes.PELDMudancas Climaticas scientific programmes of the Brazilian National Science Agency (CNPq)Brazilian IODP Program (CAPES/MEC)P&D Program ANP/BrasoilFAPERJDiretoria Pesquisa Cient, Inst Pesquisas, Jardim Bot Rio De Janeiro, Rua Pacheco Leao 915, BR-22460030 Rio De Janeiro, RJ, BrazilUniv Fed Rio de Janeiro, Inst Biol, BR-21941599 Rio De Janeiro, RJ, BrazilUniv Fed Espirito Santo, Dept Oceanog, Ave Fernando Ferrari 514, BR-29090600 Vitoria, ES, BrazilUniv Fed Sao Paulo, Inst Mar, Campus Baixada Santista, BR-11030400 Santos, SP, BrazilUniv Fed Paraiba, Ctr Ciencias Aplicadas & Educ, Campus 4 Litoral Norte, BR-58297000 Rio Tinto, PB, BrazilUniv Fed Sao Paulo, Inst Mar, Campus Baixada Santista, BR-11030400 Santos, SP, BrazilANP/Brasoil: 48610.011015/2014-55Web of Scienc

Reef fishes of the Anchieta Island State Park, Southwestern Atlantic, Brazil

This paper presents a checklist of the reef fish fauna of the Anchieta Island State Park, a no-take zone in which no extractive activities are allowed, in Ubatuba, Southeastern Brazil. Data was obtained between 2011 and 2013, mainly through underwater observations with snorkelling and SCUBA, and secondarily using scientific fishing (trawling). Published and unpublished data were also verified and compiled. A total of 103 reef fish species, distributed in 78 genus and 50 families was recorded. Haemulidae was the richest family (n=7 species), followed by Epinephelidae (n=6), Pomacentridae, Carangidae and Tetraodontidae (n=4 each). Haemulon was also the most speciose genera (n=5), followed by Stegastes, Acanthurus and Mycteroperca (n=3 each). Sixty-nine species (67%) are included in global and regional Red Lists. Twenty-five species (24.2%) are within the categories Critically Endangered (CR), Endangered (EN), Vulnerable (VU) and Near-Threathened (NT). The network of Marine Protected Areas in Southeastern Brazil is still incipient, and the considerable number of threatened species in the Anchieta Island State Park clearly indicates the importance of the study area for the conservation of coastal and reef fishes.CNPqFAPERJCAPESUniv Estadual Paulista, Inst Biociencias, Sao Vicente, SP, BrazilUniv Fed Sao Paulo, Inst Mar, Lab Ecol & Conservacao Marinha, Santos, SP, BrazilUniv Fed Rio de Janeiro, Inst Biol & SAGE COPPE, Rio De Janeiro, RJ, BrazilUniv Fed Paraiba, Ctr Ciencias Aplicadas & Educ, Rio Tinto, PB, BrazilUniv Estadual Paulista, Campus Expt Registro, Registro, SP, BrazilUniv Fed Sao Paulo, Inst Mar, Lab Ecol & Conservacao Marinha, Santos, SP, BrazilWeb of Scienc

Reef fish and benthic assemblages of the Trindade and Martin Vaz Island group, southwestern Atlantic

O conjunto insular de Trindade e Martin Vaz (CITMV) está localizado a aproximadamente 1.120 km da costa brasileira. Apesar de sua importância, salientada pela presença de diversas espécies endêmicas de peixes, não existem informações detalhadas sobre as assembléias de peixes e bentos do CITMV. É apresentada aqui a primeira caracterização quantitativa das assembléias de peixes e bentos do CITMV em um gradiente de profundidade entre 5 e 45 m. Informações qualitativas adicionais sobre assembléias recifais entre 45 e 100 m foram obtidas utilizando-se técnicas avançadas de mergulho (TRIMIX) e um veículo de operação remota (VOR). Assim como outras ilhas oceânicas brasileiras, a CITMV possui assembléias depauperadas de peixes e bentos, possivelmente devido ao seu isolamento e pequeno tamanho em comparação ao continente. A profundidade foi o fator que mais afetou a estrutura das assembléias de peixes, com a densidade da maioria das espécies declinando com o aumento da profundidade. Os recifes profundos (>; 45 m) foram caracterizados pela presença de bancos extensivos de rodolitos e recifes rochosos esparsamente cobertos por algas coralináceas incrustantes, corais negros (Cirripathes sp.) e alguns corais massivos e em de forma de placa. Peixes parcialmente ou obrigatoriamente planctívoros (e.g. Cephalopholis furcifer and Clepticus brasiliensis) também dominaram em recifes profundos. Características similares foram registradas para recifes mesofóticos ao longo do Atlântico Ocidental. Evidências de sobrepesca (obtidas aqui e em outros estudos recentes), a presença de quatro espécies de peixes endêmicas e com distribuição restrita, e o aumento no número de espécies novas ainda não descritas, indicam que a adoção de medidas de conservação baseadas no princípio da precaução é urgentemente necessária para garantir a manutenção dos ecossistemas frágeis e únicos do CITMV.The Trindade and Martin Vaz island group (TMVIG) is located at about 1,120 km off the Brazilian coast. Despite its importance, highlighted by the presence of several endemic fish species, the TMVIG lacks detailed information on the structure of fish and benthic assemblages. Presented here is the first quantitative assessment of reef fish and benthic assemblages of the TMVIG in a depth gradient ranging from 5 to 45 m. Additional qualitative information on reef assemblages between 45 and 100 m was obtained using advanced gas diving techniques (TRIMIX) and a remotely operated vehicle (ROV). Similarly to other Brazilian oceanic islands, the TMVIG possesses depauperated fish and benthic assemblages, possibly due to its isolation and small size in comparison to the mainland. Depth was the most important factor affecting the structure of fish assemblages, with the density of most fish species declining with depth. Deep reefs (>; 45 m) were characterized by the presence of extensive rhodolith beds and rocky reefs sparsely covered with crustose coralline algae, black coral (Cirripathes sp.) and a few massive or plate-like reef corals. Part-time or obligatory planktivorous fishes (e.g. Cephalopholis furcifer and Clepticus brasiliensis) also dominated deep reefs. Similar characteristics were recorded in mesophotic reef ecosystems across the Western Atlantic. Evidence of overfishing (obtained here and in other recent studies), the presence of four endemic and restricted range fish species, as well as the increase in number of new (and still undescribed) endemic taxa, indicates that the adoption of precautionary conservation measures are urgently needed in order to maintain the fragile and unique ecosystems of the TMVIG

Photobacterium sanctipauli sp nov isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil

Five novel strains of Photobacterium (A-394T, A-373, A-379, A-397 and A-398) were isolated from bleached coralMadracis decactis (scleractinian) in the remote St Peter & St Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. Healthy M. decactis specimens were also surveyed, but no strains were related to them. The novel isolates formed a distinct lineage based on the 16S rRNA, recA, and rpoA gene sequences analysis. Their closest phylogenetic neighbours were Photobacterium rosenbergii, P. gaetbulicola, and P. lutimaris, sharing 96.6 to 95.8% 16S rRNA gene sequence similarity. The novel species can be differentiated from the closest neighbours by several phenotypic and chemotaxonomic markers. It grows at pH 11, produces tryptophane deaminase, presents the fatty acid C-18:0, but lacks C-16:0 iso. The whole cell protein profile, based in MALDI-TOF MS, distinguished the strains of the novel species among each other and from the closest neighbors. In addition, we are releasing the whole genome sequence of the type strain. The name Photobacterium sanctipauli sp. nov. is proposed for this taxon. The G + C content of the type strain A-394(T) (=LMG27910(T) = CAIM1892(T)) is 48.2 mol%

Mesophotic reef fish assemblages of the remote St. Peter and St. Paul's Archipelago, Mid-Atlantic Ridge, Brazil

Mesophotic reef fish assemblages (30-90 m depth) of the small and remote St. Peter and St. Paul's Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil, were characterized using remotely operated vehicles. Ordination analyses identified distinct fish assemblages in the upper (30-50 m) and lower (50-90 m) mesophotic zones, the former characterized by high abundances of species that are also abundant at euphotic reefs (Caranx lugubris, Melichthys niger, Stegastes sanctipauli and Chromis multilineata) and the latter dominated by two mesophotic specialists (Prognathodes obliquus and Chromis enchrysura). Planktivores dominated fish assemblages, particularly in the upper mesophotic zone, possibly due to a greater availability of zooplankton coming from the colder Equatorial Undercurrent in mesophotic depths of the SPSPA. Turf algae, fleshy macroalgae and scleractinian corals dominated benthic assemblages between 30 and 40 m depth, while bryozoans, black corals and sponges dominated between 40 and 90 m depth. Canonical correspondence analysis explained 74 % of the relationship between environmental characteristics (depth, benthic cover and complexity) and structure of fish assemblages, with depth as the most important independent variable. Juveniles of Bodianus insularis and adults of P. obliquus and C. enchrysura were clearly associated with branching black corals (Tanacetipathes spp.), suggesting that black corals play key ecological roles in lower mesophotic reefs of the SPSPA. Results from this study add to the global database about mesophotic reef ecosystems (MREs) and provide a baseline for future evaluations of possible anthropogenic and natural disturbances on MREs of the SPSPA.Conselho Nacional de Desenvolvimento Cientifico e Tecnologico-CNPqCNPqFundacao de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES)Univ Sao Paulo, Inst Oceanog, Programa Posgrad Oceanog Biol, BR-05508120 Sao Paulo, SP, BrazilUniv Fed Paraiba, Programa Posgrad Ciencias Biol Zool, BR-58059900 Joao Pessoa, PB, BrazilUniv Fed Paraiba, Programa Posgrad Ecol & Monitoramento Ambiental, BR-58297000 Rio Tinto, PB, BrazilUniv Estadual Paraiba, Programa Posgrad Ecol & Conservac, BR-58109753 Campina Grande, PB, BrazilUniv Fed Pernambuco, Dept Oceanog, Ctr Tecnol & Geociencias, BR-50670901 Recife, PE, BrazilUniv Fed Paraiba, Ctr Ciencias Exatas & Nat, Dept Sistemat & Ecol, BR-58051900 Joao Pessoa, PB, BrazilInst Pesquisas Jardim Bot Rio De Janeiro, Rio De Janeiro, RJ, BrazilUniv Fed Sao Paulo, Inst Mar, Campus Baixada Santista, BR-11030400 Santos, SP, BrazilUniv Fed Rio de Janeiro, Inst Biol, BR-21944970 Rio De Janeiro, RJ, BrazilUniv Fed Rio de Janeiro, SAGE COPPE, BR-21944970 Rio De Janeiro, RJ, BrazilUniv Sao Paulo, Inst Oceanog, Dept Oceanog Biol, BR-05508120 Sao Paulo, SP, BrazilUniv Fed Paraiba, Dept Engn & Meio Ambiente, BR-58297000 Rio Tinto, PB, BrazilUniv Fed Sao Paulo, Inst Mar, Campus Baixada Santista, BR-11030400 Santos, SP, BrazilCNPq: 557185/09-2CNPq: 484875/2011-6Web of Scienc

Abrolhos Bank Reef Health Evaluated by Means of Water Quality, Microbial Diversity, Benthic Cover, and Fish Biomass Data

The health of the coral reefs of the Abrolhos Bank (southwestern Atlantic) was characterized with a holistic approach using measurements of four ecosystem components: (i) inorganic and organic nutrient concentrations, [1] fish biomass, [1] macroalgal and coral cover and (iv) microbial community composition and abundance. The possible benefits of protection from fishing were particularly evaluated by comparing sites with varying levels of protection. Two reefs within the well-enforced no-take area of the National Marine Park of Abrolhos (Parcel dos Abrolhos and California) were compared with two unprotected coastal reefs (Sebastião Gomes and Pedra de Leste) and one legally protected but poorly enforced coastal reef (the “paper park” of Timbebas Reef). The fish biomass was lower and the fleshy macroalgal cover was higher in the unprotected reefs compared with the protected areas. The unprotected and protected reefs had similar seawater chemistry. Lower vibrio CFU counts were observed in the fully protected area of California Reef. Metagenome analysis showed that the unprotected reefs had a higher abundance of archaeal and viral sequences and more bacterial pathogens, while the protected reefs had a higher abundance of genes related to photosynthesis. Similar to other reef systems in the world, there was evidence that reductions in the biomass of herbivorous fishes and the consequent increase in macroalgal cover in the Abrolhos Bank may be affecting microbial diversity and abundance. Through the integration of different types of ecological data, the present study showed that protection from fishing may lead to greater reef health. The data presented herein suggest that protected coral reefs have higher microbial diversity, with the most degraded reef (Sebastião Gomes) showing a marked reduction in microbial species richness. It is concluded that ecological conditions in unprotected reefs may promote the growth and rapid evolution of opportunistic microbial pathogens