Calculation of AGARD Wing 445.6 Flutter Using Navier-Stokes Aerodynamics

An unsteady, 3D, implicit upwind Euler/Navier-Stokes algorithm is here used to compute the flutter characteristics of Wing 445.6, the AGARD standard aeroelastic configuration for dynamic response, with a view to the discrepancy between Euler characteristics and experimental data. Attention is given to effects of fluid viscosity, structural damping, and number of structural model nodes. The flutter characteristics of the wing are determined using these unsteady generalized aerodynamic forces in a traditional V-g analysis. The V-g analysis indicates that fluid viscosity has a significant effect on the supersonic flutter boundary for this wing

Phenomenology of supersymmetric models with a singlet

The supersymmetric extension of the standard model with an additional gauge singlet is analysed in detail in the light of the recent experimental bounds on supersymmetric particles. The useful part of the parameter space and the particle spectrum are displayed. We find that once the recent bounds on the chargino mass are imposed, all other new particles practically satisfy the present experimental limits. Special attention is given to particles to be searched for in the future experiments. The singlet fields tend to decouple and give rise to an effective MSSM, enlarging the validity of many phenomenological analyses based in the minimal field content. However, in some ranges of the parameters the singlino is the lightest neutralino, which modifies the signature for susy particles. Simple analytical approximations are developed that qualitatively explain the numerical results.Comment: 32 pages, 1 table, 6 figures, LaTeX2

Segment-based multiple sequence alignment

Motivation: Many multiple sequence alignment tools have been developed in the past, progressing either in speed or alignment accuracy. Given the importance and wide-spread use of alignment tools, progress in both categories is a contribution to the community and has driven research in the field so far. Results: We introduce a graph-based extension to the consistency-based, progressive alignment strategy. We apply the consistency notion to segments instead of single characters. The main problem we solve in this context is to define segments of the sequences in such a way that a graph-based alignment is possible. We implemented the algorithm using the SeqAn library and report results on amino acid and DNA sequences. The benefit of our approach is threefold: (1) sequences with conserved blocks can be rapidly aligned, (2) the implementation is conceptually easy, generic and fast and (3) the consistency idea can be extended to align multiple genomic sequences. Availability: The segment-based multiple sequence alignment tool can be downloaded from http://www.seqan.de/projects/msa.html. A novel version of T-Coffee interfaced with the tool is available from http://www.tcoffee.org. The usage of the tool is described in both documentations. Contact: [email protected]

Status Quo der Vermarktung ökologischer Ziegenmilchprodukte: Sicherung von mikrobiologischer Qualität und Authentizität am Modell der Region Hessen

Für eine Status-Quo-Erhebung am Modell der Region Hessen wurden ökologisch bzw. zu Vergleichszwecken konventionell erzeugte Ziegenmilchprodukte (Ziegenkäse) aus Direktvermarktung und Handel auf mikrobiologische Qualität und tierartspezifische Authentizität untersucht. Die mikrobiologischen Untersuchungen von 183 Proben zeigen, dass Ziegenkäse aus regionaler Direktvermarktung in Hessen hinsichtlich Gesundheitsrisiken durch pathogene Keime kein über dem für vergleichbare Produkte liegendes Problem darstellt. Für Ziegenkäse aus einigen Betrieben wurden aber deutliche Hygienemängel festgestellt, in Produkten zweier Betriebe (davon ein ökologisch wirtschaftender Direktvermarkter) mit den stärksten Hygienemängeln wurden zudem Listeria monocytogenes nachgewiesen. Die molekularbiologische Untersuchung von 160 als reine Ziegenmilchprodukte deklarierten Proben mittels PCR ergab, dass - mit Ausnahme der Produkte eines auffälligen Betriebes - ökologischen Produkte aus regionaler Direktvermarktung keine Kuhmilchzusätze enthielten. Bei Importprodukten war der Anteil positiver Proben je nach Ursprungsland sehr unterschiedlich. Insgesamt ergab sich für die untersuchten Parameter somit ein überwiegend positives Gesamtbild, die Produkte einzelner Betriebe mussten jedoch als problematisch angesehen werden. Aufgrund der Befunde erscheint es sinnvoll, zur Sicherstellung einer durchgehend guten Qualität und der gesundheitlichen Unbedenklichkeit in einigen Bereichen, insbesondere im Hinblick auf mikrobiologische Hygienemarker, verstärkt Routineuntersuchungen durchzuführen

Local strain distribution in real three-dimensional alveolar geometries

Mechanical ventilation is not only a life saving treatment but can also cause negative side effects. One of the main complications is inflammation caused by overstretching of the alveolar tissue. Previously, studies investigated either global strains or looked into which states lead to inflammatory reactions in cell cultures. However, the connection between the global deformation, of a tissue strip or the whole organ, and the strains reaching the single cells lining the alveolar walls is unknown and respective studies are still missing. The main reason for this is most likely the complex, sponge-like alveolar geometry, whose three-dimensional details have been unknown until recently. Utilizing synchrotron-based X-ray tomographic microscopy, we were able to generate real and detailed three-dimensional alveolar geometries on which we have performed finite-element simulations. This allowed us to determine, for the first time, a three-dimensional strain state within the alveolar wall. Briefly, precision-cut lung slices, prepared from isolated rat lungs, were scanned and segmented to provide a three-dimensional geometry. This was then discretized using newly developed tetrahedral elements. The main conclusions of this study are that the local strain in the alveolar wall can reach a multiple of the value of the global strain, for our simulations up to four times as high and that thin structures obviously cause hotspots that are especially at risk of overstretching

Analysis of U.S. Water Resources under Climate Change

The MIT Integrated Global System Model (IGSM) framework, extended to include a Water Resource System (WRS) component, is applied to an integrated assessment of effects of alternative climate policy scenarios on U.S. water systems. Climate results are downscaled to yield estimates of surface runoff at 99 river basins of the continental U.S., with an exploration of climate patterns that are relatively wet and dry over the region. These estimates are combined with estimated groundwater supplies. An 11-region economic model (USREP) sets conditions driving water requirements estimated for five use sectors, with detailed sub-models employed for analysis of irrigation and electric power. The water system of the interconnected basins is operated to minimize water stress. Results suggest that, with or without climate change, U.S. average annual water stress is expected to increase over the period 2041 to 2050, primarily because of an increase in water requirements, with the largest water stresses projected in the South West. Policy to lower atmospheric greenhouse gas concentrations has a beneficial effect, reducing water stress intensity and variability in the concerned basins.The Joint Program on the Science and Policy of Global Change is funded by the U.S. Department of Energy, Office of Science under grants DE-FG02-94ER61937, DE-FG02- 93ER61677, DEFG02-08ER64597, and DE-FG02-06ER64320; the U.S. Environmental Protection Agency under grants XA-83344601-0, XA-83240101, XA-83042801-0, PI-83412601- 0, RD-83096001, and RD-83427901-0; the U.S. National Science Foundation under grants SES- 0825915, EFRI-0835414, ATM-0120468, BCS-0410344, ATM-0329759, and DMS-0426845; the U.S. National Aeronautics and Space Administration under grants NNX07AI49G, NNX08AY59A, NNX06AC30A, NNX09AK26G, NNX08AL73G, NNX09AI26G, NNG04GJ80G, NNG04GP30G, and NNA06CN09A; the U.S. National Oceanic and Atmospheric Administration under grants DG1330-05-CN-1308, NA070AR4310050, and NA16GP2290; the U.S. Federal Aviation Administration under grant 06-C-NE-MIT; the Electric Power Research Institute under grant EPP32616/C15124; and a consortium of 40 industrial and foundation sponsors (for the complete list see http://globalchange.mit.edu/sponsors/current.html

Galactomannan Does Not Precede Major Signs on a Pulmonary Computerized Tomographic Scan Suggestive of Invasive Aspergillosis in Patients with Hematological Malignancies

Background. Detection of serum galactomannan (GM) antigen and presence of the halo sign on a pulmonary computerized tomographic (CT) scan have a high specificity but a low sensitivity to diagnose invasive aspergillosis (IA) in patients at risk for this disease. To our knowledge, the relationship between the time at which pulmonary infiltrates are detected by CT and the time at which GM antigens are detected by enzyme immunoassay (EIA) has not been studied. Methods. In a prospective study, tests for detection of GM were performed twice weekly for patients with hematological malignancies who had undergone hematopoetic stem cell transplantation (HSCT) or had received induction and/or consolidation chemotherapy. A pulmonary CT scan was performed once weekly. Infiltrates were defined as either major or minor signs. IA was classified as proven, probable, or possible, in accordance with the definition stated by the European Organization for Research and Treatment of Cancer-Invasive Fungal Infections Cooperative Group and the National Institute of Allergy and Infectious Diseases Mycoses Study Group. Results. We analyzed 161 episodes of infection in 107 patients (65 allogeneic HSCT recipients, 30 autologous HSCT recipients, and 66 induction and/or consolidation chemotherapy recipients). A total of 109 episodes with no IA, 32 episodes with possible IA, and 20 episodes with probable or proven IA were identified. Minor pulmonary signs were detected by CT in 70 episodes (43%), and major pulmonary signs were detected by CT in 11 episodes (7%). Univariate and multivariate analyses revealed no significant association between detection of GM by EIA and detection of abnormal pulmonary signs by CT. A significant association was found between GM levels and receipt of piperacillin-tazobactam. GM test results were not positive before major signs were seen on CT images. Only 7 (10%) of 70 patients with minor pulmonary signs had positive GM test results before detection of the greatest pathologic change by CT. Conclusions. We show that detection of GM by EIA does not precede detection of major lesions by pulmonary CT. In the clinical setting, the decision to administer mold-active treatment should based on detection of new pulmonary infiltrates on CT performed early during infection, rather than on results of EIA for detection of G

Collective decision-making on triadic graphs

Many real-world networks exhibit community structures and non-trivial clustering associated with the occurrence of a considerable number of triangular subgraphs known as triadic motifs. Triads are a set of distinct triangles that do not share an edge with any other triangle in the network. Network motifs are subgraphs that occur significantly more often compared to random topologies. Two prominent examples, the feedforward loop and the feedback loop, occur in various real-world networks such as gene-regulatory networks, food webs or neuronal networks. However, as triangular connections are also prevalent in communication topologies of complex collective systems, it is worthwhile investigating the influence of triadic motifs on the collective decision-making dynamics. To this end, we generate networks called Triadic Graphs (TGs) exclusively from distinct triadic motifs. We then apply TGs as underlying topologies of systems with collective dynamics inspired from locust marching bands. We demonstrate that the motif type constituting the networks can have a paramount influence on group decision-making that cannot be explained solely in terms of the degree distribution. We find that, in contrast to the feedback loop, when the feedforward loop is the dominant subgraph, the resulting network is hierarchical and inhibits coherent behavior