Letter to the Editor: 1H, 15N, and 13C chemical shift assignments of the resuscitation promoting factor domain of Rv1009 from Mycobacterium tuberculosis

International audienceNo abstract availabl

The connection between radio and high energy emission in black hole powered systems in the SKA era

Strong evidence exists for a highly significant correlation between the radio flux density and gamma-ray energy flux in blazars revealed by Fermi. However, there are central issues that need to be clarified in this field: what are the counterparts of the about 30% of gamma-ray sources that are as yet unidentified? Are they just blazars in disguise or they are something more exotic, possibly associated with dark matter? How would they fit in the radio-gamma ray connection studied so far? With their superb sensitivity, SKA1-MID and SKA1-SUR will help to resolve all of these questions. Even more, while the radio-MeV/GeV connection has been firmly established, a radio-VHE connection has been entirely elusive so far. The advent of CTA in the next few years and the expected CTA-SKA1 synergy will offer the chance to explore this connection, even more intriguing as it involves the opposite ends of the electromagnetic spectrum and the acceleration of particles up to the highest energies. We are already preparing to address these questions by exploiting data from the various SKA pathfinders and precursors. We have obtained 18 cm European VLBI Network observations of E>10 GeV sources, with a detection rate of 83%. Moreover, we are cross correlating the Fermi catalogs with the MWA commissioning survey: when faint gamma-ray sources are considered, pure positional coincidence is not significant enough for selecting counterparts and we need an additional physical criterion to pinpoint the right object. It can be radio spectral index, variability, polarization, or compactness, needing high angular resolution in SKA1-MID; timing studies can also reveal pulsars, which are often found from dedicated searches of unidentified gamma-ray sources. SKA will be the ideal instrument for investigating these characteristics in conjunction with CTA. (abridged)Comment: 12 pages, to be published in the proceedings of "Advancing Astrophysics with the Square Kilometre Array", PoS(AASKA14)15

TDP2 promotes repair of topoisomerase I-mediated DNA damage in the absence of TDP1

The abortive activity of topoisomerases can result in clastogenic and/or lethal DNA damage in which the topoisomerase is covalently linked to the 3'- or 5'-terminus of a DNA strand break. This type of DNA damage is implicated in chromosome translocations and neurological disease and underlies the clinical efficacy of an important class of anticancer topoisomerase 'poisons'. Tyrosyl DNA phosphodiesterase-1 protects cells from abortive topoisomerase I (Top1) activity by hydrolyzing the 3'-phosphotyrosyl bond that links Top1 to a DNA strand break and is currently the only known human enzyme that displays this activity in cells. Recently, we identified a second tyrosyl DNA phosphodiesterase (TDP2; aka TTRAP/EAPII) that possesses weak 3'-tyrosyl DNA phosphodiesterase (3'-TDP) activity, in vitro. Herein, we have examined whether TDP2 contributes to the repair of Top1-mediated DNA breaks by deleting Tdp1 and Tdp2 separately and together in murine and avian cells. We show that while deletion of Tdp1 in wild-type DT40 cells and mouse embryonic fibroblasts decreases DNA strand break repair rates and cellular survival in response to Top1-induced DNA damage, deletion of Tdp2 does not. However, deletion of both Tdp1 and Tdp2 reduces rates of DNA strand break repair and cell survival below that observed in Tdp1(-)(/)(-) cells, suggesting that Tdp2 contributes to cellular 3'-TDP activity in the absence of Tdp1. Consistent with this idea, over-expression of human TDP2 in Tdp1(-)(/)(-)/Tdp2(-)(/)(-)(/)(-) DT40 cells increases DNA strand break repair rates and cell survival above that observed in Tdp1(-)(/)(-) DT40 cells, suggesting that Tdp2 over-expression can partially complement the defect imposed by loss of Tdp1. Finally, mice lacking both Tdp1 and Tdp2 exhibit greater sensitivity to Top1 poisons than do mice lacking Tdp1 alone, further suggesting that Tdp2 contributes to the repair of Top1-mediated DNA damage in the absence of Tdp1. In contrast, we failed to detect a contribution for Tdp1 to repair Top2-mediated damage. Together, our data suggest that Tdp1 and Tdp2 fulfil overlapping roles following Top1-induced DNA damage, but not following Top2-induced DNA damage, in vivo

Determination of enhancement ratios of HCOOH relative to CO in biomass burning plumes by the Infrared Atmospheric Sounding Interferometer (IASI)

Formic acid (HCOOH) concentrations are often underestimated by models, and its chemistry is highly uncertain. HCOOH is, however, among the most abundant atmospheric volatile organic compounds, and it is potentially responsible for rain acidity in remote areas. HCOOH data from the Infrared Atmospheric Sounding Interferometer (IASI) are analyzed from 2008 to 2014 to estimate enhancement ratios from biomass burning emissions over seven regions. Fire-affected HCOOH and CO total columns are defined by combining total columns from IASI, geographic location of the fires from Moderate Resolution Imaging Spectroradiometer (MODIS), and the surface wind speed field from the European Centre for Medium-Range Weather Forecasts (ECMWF). Robust correlations are found between these fire-affected HCOOH and CO total columns over the selected biomass burning regions, allowing the calculation of enhancement ratios equal to 7.30  ×  10−3 ± 0.08  ×  10−3 mol mol−1 over Amazonia (AMA), 11.10  ×  10−3 ± 1.37  ×  10−3 mol mol−1 over Australia (AUS), 6.80  ×  10−3 ± 0.44  ×  10−3 mol mol−1 over India (IND), 5.80  ×  10−3 ± 0.15  ×  10−3 mol mol−1 over Southeast Asia (SEA), 4.00  ×  10−3 ± 0.19  ×  10−3 mol mol−1 over northern Africa (NAF), 5.00  ×  10−3 ± 0.13  ×  10−3 mol mol−1 over southern Africa (SAF), and 4.40  ×  10−3 ± 0.09  ×  10−3 mol mol−1 over Siberia (SIB), in a fair agreement with previous studies. In comparison with referenced emission ratios, it is also shown that the selected agricultural burning plumes captured by IASI over India and Southeast Asia correspond to recent plumes where the chemistry or the sink does not occur. An additional classification of the enhancement ratios by type of fuel burned is also provided, showing a diverse origin of the plumes sampled by IASI, especially over Amazonia and Siberia. The variability in the enhancement ratios by biome over the different regions show that the levels of HCOOH and CO do not only depend on the fuel types

The FFAG R&D and medical application project RACCAM

JACoW web site http://accelconf.web.cern.ch/AccelConf/e06/Pre-Press/WEPCH161.pdf WEPCH161International audienceThe RACCAM project (Recherche en ACCelerateurs et Applications Medicales) has recently obtained fundings, extending over three years (2006-2008), from the French National Research Agency (ANR). RACCAM is a tripartite collaboration, involving (i) the CNRS Laboratory IN2P3/LPSC, (ii) the French magnet industrial SIGMAPHI, and (iii) the nuclear medecine Departement of Grenoble Hospital. The project concerns fixed field alternating gradient accelerator (FFAG) research on the one hand, and on the other hand their application as hadrontherapy and biology research machines. RACCAM's goal is three-fold, (i) participate to the on-going international collaborations in the field of FFAGs and recent concepts of "non-scaling" FFAGs, with frames for instance, the Neutrino Factory (NuFact) and the EMMA project of an electron model of a muon FFAG accelerator, (ii) design, build and experiment a prototype of an FFAG magnet proper to fulfil the requirements of rapid cycling acceleration, (iii) develop the concepts, and show the feasibility, of the application of such FFAG beams to hadrontherapy and to biology research

Low-frequency radio emission in the massive galaxy cluster MACS J0717.5 + 3745

International audienceTo investigate the nonthermal emission mechanism and their interaction during cluster mergers, we analyze multiple low-frequency radio data for the X-ray luminous massive galaxy cluster MACS J0717.5 + 3745, located at z = 0.5548. Large-scale structure-formation models in the Universe suggest that galaxy clusters grow via constant accretion of gas and the merger of galaxy groups and smaller clusters. Low-frequency radio observations trace these mergers in the form of relics and halos. The dual frequency observations were performed on MACS J0717.5 + 3745 to investigate the spectral index pattern of the nonthermal emission and its interaction within the intracluster medium (ICM), during merger process. Methods: Continuum observations were carried out using GMRT at 0.235 and 0.61 GHz on MACS J0717.5 + 3745 and archival data from the VLA (0.074 and 1.42 GHz) and WSRT (0.325 GHz) was used to complement the results. Furthermore, to explore the thermal and nonthermal interactions within the ICM and the morphological distribution, Chandra X-ray and HST data were used. Results: A highly complex nonthermal radio emission distribution is seen in the cluster at very low frequencies, with a global spectral index α0.2350.61˜-1.17±0.37. We have detected a giant radio halo within the cluster system with a linear size of 1.58 Mpc and a "Chair-shaped" filament structure between the merging subclusters of linear size 853 kpc at 0.235 GHz. This is the most powerful halo ever observed with P1.4 = 9.88 × 1025 WHz-1 and an equipartition magnetic field estimate of ~6.49 μG. The bright filament structure is well located in the central merging region of subclusters with enhanced temperature, as shown by Chandra and HST data analysis, further indicating the formation of this structure due to shock waves encountered within the ICM during the merger events

Crack tip fields in elastic-plastic and mixed mode I+II+III conditions, finite elements simulations and modeling

This paper is devoted to the analysis of the load path effect on I+II+III mixed mode fatigue crack propagation in a 316L stainless steel. Experiments were conducted in mode I+II and in mode I+II+III. The same maximum, minimum and mean values of the stress intensity factors were used for each loading path in the experiments. The main result of this set of experiments is that very different crack growth rates and crack paths are observed for load paths that are however considered as equivalent in most fatigue criteria. The experiments conducted in mode I+II and in mode I+II+III, also allowed to show that the addition of mode III loading steps to a mode I+II loading sequence is increasing the fatigue crack growth rate, even when the crack path is not significantly modified