Phylogenetic analysis of human Chlamydia pneumoniae strains reveals a distinct Australian indigenous clade that predates European exploration of the continent

© 2015 Roulis et al. Background: The obligate intracellular bacterium Chlamydia pneumoniae is a common respiratory pathogen, which has been found in a range of hosts including humans, marsupials and amphibians. Whole genome comparisons of human C. pneumoniae have previously highlighted a highly conserved nucleotide sequence, with minor but key polymorphisms and additional coding capacity when human and animal strains are compared. Results: In this study, we sequenced three Australian human C. pneumoniae strains, two of which were isolated from patients in remote indigenous communities, and compared them to all available C. pneumoniae genomes. Our study demonstrated a phylogenetically distinct human C. pneumoniae clade containing the two indigenous Australian strains, with estimates that the most recent common ancestor of these strains predates the arrival of European settlers to Australia. We describe several polymorphisms characteristic to these strains, some of which are similar in sequence to animal C. pneumoniae strains, as well as evidence to suggest that several recombination events have shaped these distinct strains. Conclusions: Our study reveals a greater sequence diversity amongst both human and animal C. pneumoniae strains, and suggests that a wider range of strains may be circulating in the human population than current sampling indicates

Exploring Andragogy: Understanding the Implications for Teaching in Higher Education

Andragogy is the theory and practice of educating adults. What are the differences between teaching HE students of different age groups? Do these differences become more prevalent with age, and does this matter? Should we revise our teaching practices to maximise engagement with mature students

Proposal for the Measurement of Bell-like Correlations from Continuous Variables

We show theoretically that Bell-type correlations can be observed between continuous variable measurements performed on a parametric source. An auxiliary measurement, performed on the detection environment, negates the possibility of constructing a local realistic description of these correlations

Quantum trajectories for the realistic measurement of a solid-state charge qubit

We present a new model for the continuous measurement of a coupled quantum dot charge qubit. We model the effects of a realistic measurement, namely adding noise to, and filtering, the current through the detector. This is achieved by embedding the detector in an equivalent circuit for measurement. Our aim is to describe the evolution of the qubit state conditioned on the macroscopic output of the external circuit. We achieve this by generalizing a recently developed quantum trajectory theory for realistic photodetectors [P. Warszawski, H. M. Wiseman and H. Mabuchi, Phys. Rev. A_65_ 023802 (2002)] to treat solid-state detectors. This yields stochastic equations whose (numerical) solutions are the ``realistic quantum trajectories'' of the conditioned qubit state. We derive our general theory in the context of a low transparency quantum point contact. Areas of application for our theory and its relation to previous work are discussed.Comment: 7 pages, 2 figures. Shorter, significantly modified, updated versio

Entanglement swapping using continuous variables

We investigate the efficacy with which entanglement can be teleported using a continuous measurement scheme. We show that by using the correct gain for the classical channel the degree of violation of locality that can be demonstrated (using a CH type inequality) is {\it not} a function of the level of entanglement squeezing used in the teleportation. This is possible because a gain condition can always be choosen such that passage through the teleporter is equivalent to pure attenuation of the input field.Comment: 8 pages, 4 figure

Language differences in qualitative research: is meaning lost in translation?

This article discusses challenges of language differences in qualitative research, when participants and the main researcher have the same non-English native language and the non-English data lead to an English publication. Challenges of translation are discussed from the perspective that interpretation of meaning is the core of qualitative research. As translation is also an interpretive act, meaning may get lost in the translation process. Recommendations are suggested, aiming to contribute to the best possible representation and understanding of the interpreted experiences of the participants and thereby to the validity of qualitative research

Continuous variable quantum cryptography

We propose a quantum cryptographic scheme in which small phase and amplitude modulations of CW light beams carry the key information. The presence of EPR type correlations provides the quantum protection.Comment: 8 pages, 3 figure

The construction of identities in narratives about serious leisure occupations

Engagement in occupation contributes to the shaping of identity throughout the human life. The act of telling about such engagement involves interaction based on symbolic meaning; the speaker constructing an identity by conveying how the occupation is personally meaningful. This study explored meaning in narratives told by people who engage in serious leisure occupations. A total of 78 narratives were extracted from interviews with 17 people who invest considerable time and other resources into their leisure. Analysis focused on the content, structure and performance of each narrative in order to explore meaning. The meanings were organised into a framework based around three dimensions: the located self, the active self and the changing self. Each dimension has facets that the individual might emphasise, constructing a unique identity. The framework offers a structured basis for conceptualising how occupation contributes to the shaping of the internalised self and the socially situated identity

Consumer palatability scores and volatile beef flavor compounds of five USDA quality grades and four muscles

Proximate data, consumer palatability scores and volatile compounds were investigated for four beef muscles (Longissimus lumborum, Psoas major, Semimembranosus and Gluteus medius) and five USDA quality grades (Prime, Upper 2/3 Choice, Low Choice, Select, and Standard). Quality grade did not directly affect consumer scores or volatiles but interactions (P < 0.05) between muscle and grade were determined. Consumer scores and volatiles differed (P < 0.05) between muscles. Consumers scored Psoas major highest for tenderness, juiciness, flavor liking and overall liking, followed by Longissimus lumborum, Gluteus medius, and Semimembranosus (P < 0.05). Principal component analysis revealed clustering of compound classes, formed by related mechanisms. Volatile n-aldehydes were inversely related to percent fat. Increases in lipid oxidation compounds were associated with Gluteus medius and Semimembranosus, while greater quantities of sulfur-containing compounds were associated with Psoas major. Relationships between palatability scores and volatile compound classes suggest that differences in the pattern of volatile compounds may play a valuable role in explaining consumer liking

Unconditional teleportation of continuous-variable entanglement

We give a protocol and criteria for demonstrating unconditional teleportation of continuous-variable entanglement (i.e., entanglement swapping). The initial entangled states are produced with squeezed light and linear optics. We show that any nonzero entanglement (any nonzero squeezing) in both of two entanglement sources is sufficient for entanglement swapping to occur. In fact, realization of continuous-variable entanglement swapping is possible using only {\it two} single-mode squeezed states.Comment: 4 pages, 2 figures, published version, title change