589 research outputs found
Optimising the imbaula stove
In South Africa, human and environmental health implications from domestic solid fuel combustion have spurred interest in cleaner alternative sources of energy and better combustion technologies. Field research among wood and coal burning informal settlements in Johannesburg has shown that the most prevalent mode of combustion is self-made imbaula (brazier) stoves, manufactured from discarded 20 L steel drums. Such stoves are made without any measure of performance optimisation, leading to fuel inefficiency and high emissions - previous field surveys have indicated that the number, size and placement of primary and secondary air inlets (taken as holes below and above the fire grate respectively) vary over a wide range, starting from an extreme with no holes below the grate [1]. Researchers at SeTAR Centre, University of Johannesburg, have set out to develop an enhanced imbaula, by investigating performance in terms of size and distribution of primary and secondary air inlets, and height of grate level. The test imbaulas are constructed out of standard 20 L drums with a height of 360 mm and diameter of 295 mm. A range of hole configurations has been designed, from which selected test configurations are fabricated for experimental evaluation of thermal and emissions properties, using the SeTAR heterogeneous testing protocol. The results indicate that higher hole densities (above and below the grate) lead to higher power outputs and lower specific CO emissions, but with lower thermal efficiency. Further, results indicate that adequate air holes below the grate (primary air) are more important for proper combustion in an imbaula; however this should be synchronised with secondary air in-lets (above the grid) in order to have congruence of all the performance criteria. This study should lead to the development of a set of criteria that can further enhance emissions reductions and fuel efficiency obtained by top-down stove ignition methods (Basa njengo Magogo) for imbaula type stoves
Community structure of Pleistocene coral reefs of Curaçao, Netherlands Antilles
The Quaternary fossil record of living coral reefs is fundamental for understanding modern ecological patterns. Living reefs generally accumulate in place, so fossil reefs record a history of their former biological inhabitants and physical environments. Reef corals record their ecological history especially well because they form large, resistant skeletons, which can be identified to species. Thus, presence-absence and relative abundance data can be obtained with a high degree of confidence. Moreover, potential effects of humans on reef ecology were absent or insignificant on most reefs until the last few hundred years, so that it is possible to analyze "natural" distribution patterns before intense human disturbance began. We characterized Pleistocene reef coral assemblages from Curacao, Netherlands Antilles, Caribbean Sea, focusing on predictability in species abundance patterns from different reef environments over broad spatial scales. Our data set is composed of >2 km of surveyed Quaternary reef. Taxonomic composition showed consistent differences between environments and along secondary environmental gradients within environments. Within environments, taxonomic composition of communities was markedly similar indicating nonrandom species associations and communities composed of species occurring in characteristic abundances. This community similarity was maintained with little change over a 40-km distance. The nonrandom patterns in species abundances were similar to those found in the Caribbean before the effects of extensive anthropogenic degradation of reefs in the late 1970s and early 1980s. The high degree of order observed in species abundance patterns of fossil reef coral communities on a scale of tens of kilometers contrasts markedly with patterns observed in previous small-scale studies of modern reefs. Dominance of Acropora palmata in the reef crest zone and patterns of overlap and nonoverlap of species in the Montastraea ''annularis'' sibling species complex highlight the tendency for distribution and abundance patterns of Pleistocene corals to reflect environmental preferences at multiple spatial scales. Wave energy is probably the most important physical environmental variable structuring these coral communities. The strong similarity between ancient and pre-1980s Caribbean reefs and the nonrandom distribution of coral species in space and time indicate that recent variability noted at much smaller time scales may be due to either unprecedented anthropogenic influences on reefs or fundamentally different patterns at varying spatio-temporal scales
How will climate change pathways and mitigation options alter incidence of vector-borne diseases? A framework for leishmaniasis in South and Meso-America
The enormous global burden of vector-borne diseases disproportionately affects poor people in tropical, developing countries. Changes in vector-borne disease impacts are often linked to human modification of ecosystems as well as climate change. For tropical ecosystems, the health impacts of future environmental and developmental policy depend on how vector-borne disease risks trade off against other ecosystem services across heterogeneous landscapes. By linking future socio-economic and climate change pathways to dynamic land use models, this study is amongst the first to analyse and project impacts of both land use and climate change on continental-scale patterns in vector-borne diseases. Models were developed for cutaneous and visceral leishmaniasis in the Americas—ecologically complex sand fly borne infections linked to tropical forests and diverse wild and domestic mammal hosts. Both diseases were hypothesised to increase with available interface habitat between forest and agricultural or domestic habitats and with mammal biodiversity. However, landscape edge metrics were not important as predictors of leishmaniasis. Models including mammal richness were similar in accuracy and predicted disease extent to models containing only climate and land use predictors. Overall, climatic factors explained 80% and land use factors only 20% of the variance in past disease patterns. Both diseases, but especially cutaneous leishmaniasis, were associated with low seasonality in temperature and precipitation. Since such seasonality increases under future climate change, particularly under strong climate forcing, both diseases were predicted to contract in geographical extent to 2050, with cutaneous leishmaniasis contracting by between 35% and 50%. Whilst visceral leishmaniasis contracted slightly more under strong than weak management for carbon, biodiversity and ecosystem services, future cutaneous leishmaniasis extent was relatively insensitive to future alternative socio-economic pathways. Models parameterised at narrower geographical scales may be more sensitive to land use pattern and project more substantial changes in disease extent under future alternative socio-economic pathways
Data curation during a pandemic and lessons learned from COVID-19
Detailed, accurate data related to a disease outbreak enable informed public health decision making. Given the variety of data types available across different regions, global data curation and standardization efforts are essential to guarantee rapid data integration and dissemination in times of a pandemic.Data availability
The underlying dataset for Fig. 1a is available open access from the supplemental material in ref. 5, and datasets for Fig. 1b,c from the UNESCO World Heritage List 2021 in ref. 32.https://www.nature.com/natcomputscihj2023Computer Scienc
Novel experimental setup for megahertz X-ray diffraction in a diamond anvil cell at the High Energy Density (HED) instrument of the European X-ray Free-Electron Laser (EuXFEL)
The high-precision X-ray diffraction setup for work with diamond anvil cells (DACs) in interaction chamber 2 (IC2) of the High Energy Density instrument of the European X-ray Free-Electron Laser is described. This includes beamline optics, sample positioning and detector systems located in the multipurpose vacuum chamber. Concepts for pump-probe X-ray diffraction experiments in the DAC are described and their implementation demonstrated during the First User Community Assisted Commissioning experiment. X-ray heating and diffraction of Bi under pressure, obtained using 20 fs X-ray pulses at 17.8 keV and 2.2 MHz repetition, is illustrated through splitting of diffraction peaks, and interpreted employing finite element modeling of the sample chamber in the DAC
Safety and immunogenicity of rVSVΔG-ZEBOV-GP Ebola vaccine in adults and children in Lambaréné, Gabon: A phase I randomised trial.
BACKGROUND: The rVSVΔG-ZEBOV-GP vaccine prevented Ebola virus disease when used at 2 × 107 plaque-forming units (PFU) in a trial in Guinea. This study provides further safety and immunogenicity data. METHODS AND FINDINGS: A randomised, open-label phase I trial in Lambaréné, Gabon, studied 5 single intramuscular vaccine doses of 3 × 103, 3 × 104, 3 × 105, 3 × 106, or 2 × 107 PFU in 115 adults and a dose of 2 × 107 PFU in 20 adolescents and 20 children. The primary objective was safety and tolerability 28 days post-injection. Immunogenicity, viraemia, and shedding post-vaccination were evaluated as secondary objectives. In adults, mild-to-moderate adverse events were frequent, but there were no serious or severe adverse events related to vaccination. Before vaccination, Zaire Ebola virus (ZEBOV)-glycoprotein (GP)-specific and ZEBOV antibodies were detected in 11% and 27% of adults, respectively. In adults, 74%-100% of individuals who received a dose 3 × 104, 3 × 105, 3 × 106, or 2 × 107 PFU had a ≥4.0-fold increase in geometric mean titres (GMTs) of ZEBOV-GP-specific antibodies at day 28, reaching GMTs of 489 (95% CI: 264-908), 556 (95% CI: 280-1,101), 1,245 (95% CI: 899-1,724), and 1,503 (95% CI: 931-2,426), respectively. Twenty-two percent of adults had a ≥4-fold increase of ZEBOV antibodies, with GMTs at day 28 of 1,015 (647-1,591), 1,887 (1,154-3,085), 1,445 (1,013-2,062), and 3,958 (2,249-6,967) for the same doses, respectively. These antibodies persisted up to day 180 for doses ≥3 × 105 PFU. Adults with antibodies before vaccination had higher GMTs throughout. Neutralising antibodies were detected in more than 50% of participants at doses ≥3 × 105 PFU. As in adults, no serious or severe adverse events related to vaccine occurred in adolescents or children. At day 2, vaccine RNA titres were higher for adolescents and children than adults. At day 7, 78% of adolescents and 35% of children had recombinant vesicular stomatitis virus RNA detectable in saliva. The vaccine induced high GMTs of ZEBOV-GP-specific antibodies at day 28 in adolescents, 1,428 (95% CI: 1,025-1,989), and children, 1,620 (95% CI: 806-3,259), and in both groups antibody titres increased up to day 180. The absence of a control group, lack of stratification for baseline antibody status, and imbalances in male/female ratio are the main limitations of this study. CONCLUSIONS: Our data confirm the acceptable safety and immunogenicity profile of the 2 × 107 PFU dose in adults and support consideration of lower doses for paediatric populations and those who request boosting. TRIAL REGISTRATION: Pan African Clinical Trials Registry PACTR201411000919191
Crowding and the shape of COVID-19 epidemics
The coronavirus disease 2019 (COVID-19) pandemic is straining public health systems worldwide, and major non-pharmaceutical interventions have been implemented to slow its spread1,2,3,4. During the initial phase of the outbreak, dissemination of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was primarily determined by human mobility from Wuhan, China5,6. Yet empirical evidence on the effect of key geographic factors on local epidemic transmission is lacking7. In this study, we analyzed highly resolved spatial variables in cities, together with case count data, to investigate the role of climate, urbanization and variation in interventions. We show that the degree to which cases of COVID-19 are compressed into a short period of time (peakedness of the epidemic) is strongly shaped by population aggregation and heterogeneity, such that epidemics in crowded cities are more spread over time, and crowded cities have larger total attack rates than less populated cities. Observed differences in the peakedness of epidemics are consistent with a meta-population model of COVID-19 that explicitly accounts for spatial hierarchies. We paired our estimates with globally comprehensive data on human mobility and predict that crowded cities worldwide could experience more prolonged epidemics
Tumor Blood Flow Differs between Mouse Strains: Consequences for Vasoresponse to Photodynamic Therapy
Fluctuations in tumor blood flow are common and attributed to factors such as vasomotion or local vascular structure, yet, because vessel structure and physiology are host-derived, animal strain of tumor propagation may further determine blood flow characteristics. In the present report, baseline and stress-altered tumor hemodynamics as a function of murine strain were studied using radiation-induced fibrosacomas (RIF) grown in C3H or nude mice. Fluctuations in tumor blood flow during one hour of baseline monitoring or during vascular stress induced by photodynamic therapy (PDT) were measured by diffuse correlation spectroscopy. Baseline monitoring revealed fluctuating tumor blood flow highly correlated with heart rate and with similar median periods (i.e., ∼9 and 14 min in C3H and nudes, respectively). However, tumor blood flow in C3H animals was more sensitive to physiologic or stress-induced perturbations. Specifically, PDT-induced vascular insults produced greater decreases in blood flow in the tumors of C3H versus nude mice; similarly, during baseline monitoring, fluctuations in blood flow were more regular and more prevalent within the tumors of C3H mice versus nude mice; finally, the vasoconstrictor L-NNA reduced tumor blood flow in C3H mice but did not affect tumor blood flow in nudes. Underlying differences in vascular structure, such as smaller tumor blood vessels in C3H versus nude animals, may contribute to strain-dependent variation in vascular function. These data thus identify clear effects of mouse strain on tumor hemodynamics with consequences to PDT and potentially other vascular-mediated therapies
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