1,007 research outputs found

    Rhizosphere Interactions Between Copper Oxide Nanoparticles and Wheat Root Exudates in a Sand Matrix; Influences on Bioavailability and Uptake

    Get PDF
    Copper oxide nanoparticles (NPs) are used in an expanding range of industries including a potential for agricultural applications as a fungicide. Accidental spills or misapplication of CuO NPs may lead to soil contamination. Plant roots exude a wide range of organic chemicals for bioprotection and to enhance bioavailability of nutrients. Many of these chemicals are metal chelators that may increase the solubility of CuO NPs, thus enhancing the impact of these NPs on plants. This work was directed towards understanding which plant exudates force increased solubility of CuO NPs and to determine if the level of NP in the growth matrix drives a feedback effect, regarding composition and quantity of exudates. Wheat seedlings (Triticum aestivum cv Deloris) were grown in a sand matrix for 10 days after 3 days of germination. The sand was amended with sublethal doses of CuO NPs from 0 to 300 mg Cu/kg dry sand. Sand was selected as the solid growth matrix as a proxy for soil in terms of plant root morphology, mechanical impedance and water stress, while providing a low background of dissolved organic carbon for the isolation of root exudates. After plant growth, the pore water was collected from the sand by vacuum filtration and analyzed. By coupling analytic techniques including Triple Quad Mass Spectroscopy and ion chromatography with geochemical modeling, we have identified citrate and the phytosiderophore, deoxymugineic acid (DMA) as chelators that drove the majority of dissolution of CuO NPs, especially DMA at higher CuO NP doses. Altered biogeochemistry within the rhizosphere was correlated with increased plant uptake of Cu and bio-response via exudate type, quantity and metal uptake. Exposure of wheat to CuO NPs lead to dose-dependent reduction in Fe, Ca, Mg, Mn and K in roots and shoots. This work is relevant to growth of commercially important crop wheat in the presence of CuO NPs as a fertilizer, fungicide or a pollutant

    Paraphilias: definition, diagnosis and treatment

    Get PDF
    There is a great deal of controversy concerning paraphilia, and defining what is normal versus deviant or disordered, given that this is to some degree dependent on cultural views of acceptability. In this article, we outline these issues and describe recent progress in diagnosing and treating paraphilias

    Characterisation and variability of greenhouse gas emissions from biomethane production via anaerobic digestion of maize

    Get PDF
    Biomethane is a renewable gas that can be used in existing infrastructure to reduce dependency on natural gas and lower greenhouse gas (GHG) emissions. Policy incentives have promoted a rapid implementation of biomethane production facilities using anaerobic digestion (AD). A range of feedstocks are used in AD including crops which have a higher GHG burden than most wastes and residues. The purpose of this research is to characterise and assess GHG emissions from typical operational biomethane facilities. It is imperative that GHG savings are obtained therefore quantifying emissions using a robust methodology is paramount. This study uses maize as a case study utilising data from several farms and AD facilities. Results show that calculated emissions for biomethane production from maize are 33.8 gCO2e/MJ of biomethane using the Renewable Energy Directive (RED) methodology. Key emission sources include N-fertiliser production, soil N2O emissions, imported electricity use, and fugitive methane. Sensitivity analysis performed assessed key data inputs and demonstrates how input inventory parameters affect the GHG balance and highlights variability in results. For the desired GHG savings to be achieved it is important that operators minimise fertiliser use, use nitrogen inhibitors, minimise imported electricity, and undertake close management of methane loss. This paper shows that although biomethane is considered a renewable, low carbon fuel, the inputs need to be carefully managed in order to achieve thi

    Stable carbon, nitrogen and sulphur isotope analysis of permafrost preserved human hair from rescue excavations (2009, 2010) at the precontact site of Nunalleq, Alaska

    Get PDF
    Acknowledgments This work was funded by an Arts and Humanities Research Council (AH/K006029/1) grant awarded to Rick Knecht, Kate Britton and Charlotta Hillerdal (Aberdeen); an AHRC-LabEx award (AH/N504543/1) to KB, RK, Keith Dobney (Liverpool) and Isabelle Sidéra (Nanterre); the Carnegie Trust to the Universities of Scotland (travel grant to KB); and the Max Planck Institute for Evolutionary Anthropology. The onsite collection of samples was carried out by staff and students from the University of Aberdeen, volunteer excavators and the residents of Quinhagak. We had logistical and planning support for fieldwork by the Qanirtuuq Incorporated, Quinhagak, Alaska, and the people of Quinhagak, who we also thank for sampling permissions. Special thanks to Warren Jones and Qanirtuuq Incorporated (especially Michael Smith and Lynn Church), and to all Nunalleq project team members, in Aberdeen and at other institutions, particularly Charlotta Hillerdal and Edouard Masson-Maclean (Aberdeen) for comments on earlier versions of this manuscript, and also to Véronique Forbes, Ana Jorge, Carly Ameen and Ciara Mannion (Aberdeen) for their inputs. Thanks also to Michelle Alexander (York). Finally, thank you to Ian Scharlotta (Alberta) for inviting us to contribute to this special issue, to the Editor, and to three anonymous reviewers, whose suggestions and recommended changes to an earlier version of this manuscript greatly improved the paper.Peer reviewedPublisher PD

    Scene signatures: localised and point-less features for localisation

    Get PDF
    This paper is about localising across extreme lighting and weather conditions. We depart from the traditional point-feature-based approach as matching under dramatic appearance changes is a brittle and hard thing. Point feature detectors are fixed and rigid procedures which pass over an image examining small, low-level structure such as corners or blobs. They apply the same criteria applied all images of all places. This paper takes a contrary view and asks what is possible if instead we learn a bespoke detector for every place. Our localisation task then turns into curating a large bank of spatially indexed detectors and we show that this yields vastly superior performance in terms of robustness in exchange for a reduced but tolerable metric precision. We present an unsupervised system that produces broad-region detectors for distinctive visual elements, called scene signatures, which can be associated across almost all appearance changes. We show, using 21km of data collected over a period of 3 months, that our system is capable of producing metric localisation estimates from night-to-day or summer-to-winter conditions

    Participation in everyday activities and quality of life in pre-teenage children living with cerebral palsy in South West Ireland

    Get PDF
    Background: Cerebral palsy (CP) is the most common cause of physical disability in children but its impact on quality of life is not well understood. This study examined participation in everyday activities among children without CP and children with mild, moderate and severe impairment due to CP. We then examined ten domains of quality of life in children with CP and investigated whether participation in everyday activities was associated with improved quality of life independent of gender, age and level of impairment. Methods: This was a cross-sectional study of children aged 8–12 years based on two questionnaires, frequency of participation (FPQ) and KIDSCREEN, completed by parents of 98 children on the South of Ireland Cerebral Palsy Register (response rate = 82%) and parents of 448 children attending two Cork city schools (response rate = 69%) who completed one questionnaire (FPQ). Multiple linear regression was used: firstly to estimate the effect of severity of CP on participation in everyday activities independent of age and gender and secondly we estimated the effect of participation on quality of life independent of age gender and level of impairment. Results: Participation in 11 of the 14 everyday activities examined varied across the children without CP and the children with varying severity of CP. In general, increased impairment decreased participation. Independent of age and gender, there was a highly significant decrease in overall participation with a fall of -6.0 (95% CI = -6.9 to -5.2) with each increasing level of impairment. The children with CP generally had high quality of life. Increased impairment was associated with diminished quality of life in just two domains – Physical well-being and Social support and peers. Overall participation in everyday activities was significantly associated with quality of life in 3 of the 10 domains (Physical well-being, Social support and peers & Moods and emotions) in analysis adjusted for gender age and level of impairment. Conclusion: While increased impairment due to CP restricts participation in the majority of everyday activities, the level of participation has a limited effect on the quality of life of the children with CP in age 8–12 years

    Receptor for Fc on the surfaces of schistosomes

    Get PDF
    Schistosoma mansoni masks its surface with adsorbed host proteins including erythrocyte antigens, immunoglobulins, major histocompatibility complex class I, and beta (2)-microglobulin (beta (2)m), presumably as a means of avoiding host immune responses, How this is accomplished has not been explained. To identify surface receptors for host proteins, we biotinylated the tegument of live S, mansoni adults and mechanically transformed schistosomula and then removed the parasite surface with detergent, Incubation of biotinylated schistosome surface extracts witt l human immunoglobulin G (IgG) Fc-Sepharose resulted in purification of a 97-kDa protein that was subsequently identified as paramyosin (Pmy), using antiserum specific for recombinant Pmy, Fc also bound recombinant S. mansoni Pmy and native S. japonicum Pmy, Antiserum to Pmy decreased the binding of Pmy to Fc-Sepharose, and no proteins bound after removal of Pmy from extracts. Fluoresceinated human Fe bound to the surface, vestigial penetration glands, and nascent oral cavity of mechanically transformed schistosomula, and rabbit anti-Pmy Fab fragments ablated the binding of Fc to the schistosome surface, Pmy coprecipitated with host IgG from parasite surface extracts, indicating that complexes formed on the parasite surface as well as in vitro. Binding of Pmy to Fe was not inhibited by soluble protein A, suggesting that Pmy does not bind to the region between the CH2 and CH3 domains used by many other Fc-binding proteins. beta (2)m did not bind to the schistosome Fc receptor (Pmy), a finding that contradicts reports from earlier workers but did bind to a heteromultimer of labeled schistosomula surface proteins, This is the first report of the molecular identity of a schistosome Fc receptor; moreover it demonstrates an additional aspect of the unusual and multifunctional properties of Pmy from schistosomes and other parasitic flatworms

    Transcriptome Analysis of CD4+ T Cells in Coeliac Disease Reveals Imprint of BACH2 and IFNγ Regulation

    Get PDF
    peer-reviewedData Availability: The raw sequencing reads (FASTQ files) and sequence read counts mapped to UCSC hg19 for each of the 74 transcriptomes sequenced in this study have been deposited at Gene Expression Omnibus (GEO) accession GSE69549.This project was funded by Science Foundation Ireland Grant number 09/IN.1/B2640 to RM.Genetic studies have to date identified 43 genome wide significant coeliac disease susceptibility (CD) loci comprising over 70 candidate genes. However, how altered regulation of such disease associated genes contributes to CD pathogenesis remains to be elucidated. Recently there has been considerable emphasis on characterising cell type specific and stimulus dependent genetic variants. Therefore in this study we used RNA sequencing to profile over 70 transcriptomes of CD4+ T cells, a cell type crucial for CD pathogenesis, in both stimulated and resting samples from individuals with CD and unaffected controls. We identified extensive transcriptional changes across all conditions, with the previously established CD gene IFNy the most strongly up-regulated gene (log2 fold change 4.6; Padjusted = 2.40x10-11) in CD4+ T cells from CD patients compared to controls. We show a significant correlation of differentially expressed genes with genetic studies of the disease to date (Padjusted = 0.002), and 21 CD candidate susceptibility genes are differentially expressed under one or more of the conditions used in this study. Pathway analysis revealed significant enrichment of immune related processes. Co-expression network analysis identified several modules of coordinately expressed CD genes. Two modules were particularly highly enriched for differentially expressed genes (P</iframe
    corecore