Establishment of restoration monitoring at Tārerekautuku Yarrs Lagoon: Conservation Biology (ECOL609) project reports

Ninety percent of New Zealand’s wetlands have been lost along with the endemic plants, fish, birds, and invertebrates. Those that remain are threatened by choking weeds, suffocating sediment, pollution from livestock and continued drainage and clearance (Hansford, 2010). Therefore, all remaining wetlands, regardless of their ecological state, are precious and need to be restored and managed to maximise the biodiversity within. Tārerekautuku Yarrs Lagoon is a 76.9 ha reserve located along the Ararira/LII River between Lincoln and Te Waihora/Lake Ellesmere. Tārerekautuku is administered by the Selwyn District Council (SDC) who have recognised the wetland’s intrinsic value. The lagoon area was known as a significant mahinga kai (food gathering) site for Ngāi Tahu, and particularly the local hapū of Ngāi Te Ruahikihiki based at Taumutu. Mahinga kai species being gathered at this site include tuna (eel), koareare (the edible rhizome of raupō/bullrush), koukoupara (bullies), mawehe (kōaro), pārera (grey duck), pūtakitaki (paradise duck), pākura (pukeko), whio (blue duck), kaaha (shag) and aruhe (bracken fern root) (Taiaroa 1880). The cultural and biodiversity values of Tārerekautuku are significant and ecological restoration of the lagoon has a huge potential to enhance these (Boffa Miskell, 2017). Selwyn District Council, with the support of the Department of Conservation (mainly Robin Smith), received approximately $800,000 from Ministry for the Environment ‘Freshwater Improvement Fund’ towards achieving five objectives: 1. To control willows and other weeds across approximately 87 ha in the Tārerekautuku Yarrs Lagoon Wetland. 2. To undertake predator control within the wetland and surrounding catchment to target mustelids, rats, and possums 3. To reduce sediment loads through instream works (up to five sediment traps or equivalent) and waterways re-battering work (approximately 2,000 m), including installing two bridges for site access. 4. To plant at least 12,516 native plants and trees across eight ha of Tārerekautuku wetland and connecting waterways. 5. To establish a monitoring programme at the Tārerekautuku wetland for Mātauranga Māori to measure ecological change over time. With Lincoln University’s proximity and MOU (pending) between them and SDC, this project provides a win-win scenario for students to help monitor ecological changes over time (objective 5). The project summaries that follow are an integral part of the ECOL609 (Conservation Biology) course that is undertaken in the first semester of 2022 where students chose a conservation area to monitor. Vegetation quadrat monitoring intended to replicate Stammer (2010); however, access to the site was deemed unsafe to proceed. This work has been added as an Appendix in this report to allow future comparisons

Time-resolved photoelectron imaging of excited state relaxation dynamics in phenol, catechol, resorcinol and hydroquinone

Time-resolved photoelectron imaging was used to investigate the dynamical evolution of the initially prepared S1 (\u3c0\u3c0*) excited state of phenol (hydroxybenzene), catechol (1,2-dihydroxybenzene), resorcinol (1,3-dihydroxybenzene), and hydroquinone (1,4-dihydroxybenzene) following excitation at 267 nm. Our analysis was supported by ab initio calculations at the coupled-cluster and CASSCF levels of theory. In all cases, we observe rapid (<1 ps) intramolecular vibrational redistribution on the S1potential surface. In catechol, the overall S1 state lifetime was observed to be 12.1 ps, which is 1\u20132 orders of magnitude shorter than in the other three molecules studied. This may be attributed to differences in the H atom tunnelling rate under the barrier formed by a conical intersection between the S1 state and the close lying S2 (\u3c0\u3c3*) state, which is dissociative along the O\u2013H stretching coordinate. Further evidence of this S1/S2 interaction is also seen in the time-dependent anisotropy of the photoelectron angular distributions we have observed. Our data analysis was assisted by a matrix inversion method for processing photoelectron images that is significantly faster than most other previously reported approaches and is extremely quick and easy to implement.Peer reviewed: YesNRC publication: Ye

Targetable Mechanical Properties by Switching between Self-Sorting and Co-assembly with In Situ Formed Tripodal Ketoenamine Supramolecular Hydrogels

A new family of supramolecular hydrogelators are introduced in which self-sorting and co-assembly can be utilised in the tuneability of the mechanical properties of the materials, a property closely tied to the nanostructure of the gel network. The in situ reactivity of the components of the gelators allows for system chemistry concepts to be applied to the formation of the gels and shows that molecular properties, and not necessarily the chemical identity, determines some gel properties in these family of gels

Developing a future protocol for measuring spider biodiversity in pastures in New Zealand

Arthropods are often ignored or under-sampled in biodiversity and conservation assessments because of their large diversity, small size and lack of taxonomic guides. Rapid biodiversity assessment programmes have been established to assess these groups accurately. A COBRA (Conservation Oriented Biodiversity Rapid Assessment) protocol consists of an intense sampling of a habitat using the optimal combination of sampling methods. We set a basis for future protocols of measuring spider biodiversity in exotic pastures in New Zealand. Overall, 28 spider species were collected. There was variation in species discovery for each collection method, i.e. pitfall traps (86.6% of total species found), ground hand collection (95.4%), suction sampling (85.7%), and sweeping (25%). The various collection methods were complementary in species that were found. Of the four sampling methods used pitfall traps and ground hand collection were far more efficient at collecting spider species in pastures per sample. These findings are relevant for the future development of these protocols and ultimately, these tools will be used for assessing and monitoring biodiversity on farms and the impacts of farming methods.info:eu-repo/semantics/publishedVersio

A preliminary study of kea (Nestor notabilis) habitat use and diet in plantation forests of Nelson, New Zealand

Kea (Nestor notabilis) are nationally endangered, large endemic parrots in the South Island of New Zealand. In recent years, anecdotal evidence and sightings from forestry workers have confirmed that kea use exotic plantation forests in the Nelson/Tasman region. We documented kea habitat use and movements in Nelson plantation and neighbouring native forests. GPS-VHF units were used to track kea movements through the plantation-native forest matrix. All birds tracked in this study spent a notable proportion of their time in plantation forests, which included feeding, roosting and nesting. Feeding observations and faecal analysis were used to determine kea diet in plantation forests. In the summer, Pinus radiata seeds were commonly observed being eaten by kea, as was cambium tissue stripped off newly harvested Pseudotsuga menziesii logs. Of the items identified through faecal analysis, the most common group was invertebrates. This research was a preliminary study of kea activity in plantation forests and suggests the value of extending research to cover at least a full calendar year to record seasonal patterns in kea diet, habitat use and movements in and out of this habitat type

Parametricity and Dependent Types

Reynolds' abstraction theorem shows how a typing judgement in System F can be translated into a relational statement (in second order predicate logic) about inhabitants of the type. We (in second order predicate logic) about inhabitants of the type. We obtain a similar result for a single lambda calculus (a pure type system), in which terms, types and their relations are expressed. Working within a single system dispenses with the need for an interpretation layer, allowing for an unusually simple presentation. While the unification puts some constraints on the type system (which we spell out), the result applies to many interesting cases, including dependently-typed ones

Head and neck cancer in the UK: what was the stage before COVID-19? UK cancer registries analysis (2011-2018)

Introduction: People who present with more advanced stage head and neck cancer (HNC) are associated with poorer outcomes and survival. The burden and trends of advanced stage HNC are not fully known at the population level. The UK national cancer registries routinely collect data on HNC diagnoses. Aims: To describe trends in stage of diagnosis of HNCs across the UK before the COVID-19 pandemic. Methods: Aggregated HNC incidence data were requested from the national cancer registries of the four UK countries for the ten most recent years of available data by subsite and American Joint Commission on Cancer stage at diagnosis classification. Additionally, data for Scotland were available by age group, sex and area-based socioeconomic deprivation category. Results: Across the UK, rates of advanced stage HNC had increased, with 59% of patients having advanced disease at diagnosis from 2016-2018. England had a lower proportion of advanced disease (58%) than Scotland, Wales or Northern Ireland (65-69%) where stage data were available. The completeness of stage data had improved over recent years (87% by 2018). Conclusion: Prior to the COVID-19 pandemic, diagnoses of HNC at an advanced stage comprised the majority of HNCs in the UK, representing the major challenge for the cancer healthcare system

CSF biomarkers for dementia

Although cerebrospinal fluid (CSF) biomarker testing is incorporated into some current guidelines for the diagnosis of dementia (such as England's National Institute for Health and Care Excellence (NICE)), it is not widely accessible for most patients for whom biomarkers could potentially change management. Here we share our experience of running a clinical cognitive CSF service and discuss recent developments in laboratory testing including the use of the CSF amyloid-β 42/40 ratio and automated assay platforms. We highlight the importance of collaborative working between clinicians and laboratory staff, of preanalytical sample handling, and discuss the various factors influencing interpretation of the results in appropriate clinical contexts. We advocate for broadening access to CSF biomarkers by sharing clinical expertise, protocols and interpretation with colleagues working in psychiatry and elderly care, especially when access to CSF may be part of a pathway to disease-modifying treatments for Alzheimer's disease and other forms of dementia

Music models aberrant rule decoding and reward valuation in dementia.

Aberrant rule- and reward-based processes underpin abnormalities of socio-emotional behaviour in major dementias. However, these processes remain poorly characterized. Here we used music to probe rule decoding and reward valuation in patients with frontotemporal dementia (FTD) syndromes and Alzheimer's disease (AD) relative to healthy age-matched individuals. We created short melodies that were either harmonically resolved ('finished') or unresolved ('unfinished'); the task was to classify each melody as finished or unfinished (rule processing) and rate its subjective pleasantness (reward valuation). Results were adjusted for elementary pitch and executive processing; neuroanatomical correlates were assessed using voxel-based morphometry. Relative to healthy older controls, patients with behavioural variant FTD showed impairments of both musical rule decoding and reward valuation, while patients with semantic dementia showed impaired reward valuation but intact rule decoding, patients with AD showed impaired rule decoding but intact reward valuation and patients with progressive non-fluent aphasia performed comparably to healthy controls. Grey matter associations with task performance were identified in anterior temporal, medial and lateral orbitofrontal cortices, previously implicated in computing diverse biological and non-biological rules and rewards. The processing of musical rules and reward distils cognitive and neuroanatomical mechanisms relevant to complex socio-emotional dysfunction in major dementias

Children and older adults exhibit distinct sub-optimal cost-benefit functions when preparing to move their eyes and hands

"© 2015 Gonzalez et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited"Numerous activities require an individual to respond quickly to the correct stimulus. The provision of advance information allows response priming but heightened responses can cause errors (responding too early or reacting to the wrong stimulus). Thus, a balance is required between the online cognitive mechanisms (inhibitory and anticipatory) used to prepare and execute a motor response at the appropriate time. We investigated the use of advance information in 71 participants across four different age groups: (i) children, (ii) young adults, (iii) middle-aged adults, and (iv) older adults. We implemented 'cued' and 'non-cued' conditions to assess age-related changes in saccadic and touch responses to targets in three movement conditions: (a) Eyes only; (b) Hands only; (c) Eyes and Hand. Children made less saccade errors compared to young adults, but they also exhibited longer response times in cued versus non-cued conditions. In contrast, older adults showed faster responses in cued conditions but exhibited more errors. The results indicate that young adults (18 -25 years) achieve an optimal balance between anticipation and execution. In contrast, children show benefits (few errors) and costs (slow responses) of good inhibition when preparing a motor response based on advance information; whilst older adults show the benefits and costs associated with a prospective response strategy (i.e., good anticipation)