Subject index and checklist of history and archaeology dissertations and research essays submitted at the University of Botswana, 1976 - 1998

Four MA dissertations and 222 BA research essays are listed alphabetically, and indexed by reference number under three subject categories-geographical area (by district, etc.), ethnic group, and a general subject index of 42 headings. All but 31 of the 226 alphabetical entries contain research solely on Botswana: the other countries being South Africa (12 entries), Zimbabwe (11), Namibia (6), Angola and Zambia (1 each). The most researched district of Botswana is Central (54 entries), followed by Kgatleng and Kweneng (25 each), North-East (24), South-East (16), Southern (9), Ngamiland (6), Chobe and Ghanzi (3 each), and Kgalagadi (2). The subject index of 29 ethnic groups ranges from Afrikaners (2 entries) and Amandebele (2) through Babirwa (7), Bakalanga (24), Bakgatla (27), Bakhalagari (4), Bakwena (21), Bangwato (19), Basarwa (5), and Batlharo (1), to Indians (3) and Ovambanderu (2). The general subject index ranges from Administration (29 entries), Agriculture (18), and Archaeology (21), through Biography (28), Cattle (7), Chieftainship (27), Class formation (7), Councils (7), Economic development (23), Education (14), and Heritage management (7), to Labour and labour migration (7), Medicine (4), Nationalism (13), Religion (15), Serfdom, servitude and slavery (7), Settlement history (19), Trade and commerce (13), Trade unions (6), and Urbanization (15). With the notable exception of one MA dissertation, there is a lack of cultural studies which may partly be attributed to research being done instead under the aegis of other departments in the Faculty of Humanities

Abundance And Vertical Flux Of Pseudo-Nitzschia In The Northern Gulf Of Mexico

Many species of the ubiquitous pennate diatom genus Pseudo-nitzschia have recently been discovered to produce domoic acid, a potent neurotoxin which causes Amnesic Shellfish Poisoning (ASP). Pseudo-nitzschia spp. were extremely abundant (up to 10(8) cells l(-1); present in 67% of 2195 samples) from 1990 to 1994 on the Louisiana and Texas, USA, continental shelves and moderately abundant (up to 10(5) cells l(-1); present in 18% of 192 samples) over oyster beds in the Terrebonne Bay estuary in Louisiana in 1993 and 1994. On the shelf there was a strong seasonal cycle with maxima every spring for 5 yr and sometimes in the fall, which were probably related to river flow, water column stability, and nutrient availability. In contrast, in the estuary there was no apparent seasonal cycle in abundance, but the time series of data is relatively short and the environment highly variable. At one site on the shelf, where sediment traps were deployed from spring to fall and sampled at frequent intervals in both 1990 and 1991, approximately 50% of the Pseudo-nitzschia spp. cells present in the water sank into sediment traps. Pseudo-nitzschia spp. were also abundant in surficial sediments. The species of Pseudo-nitzschia present, during this study were not routinely identified with the methods employed. However, toxin-producing P. multiseries has been identified previously from Galveston Bay, Texas, and cells from a bloom on the shelf in June 1993 were identified by scanning electron microscopy as P. pseudodelicatissima, which is sometimes toxic. Although there have been no known outbreaks of ASP in this area, historical data suggests that Pseudo-nitzschia spp,abundance may have increased on the shelf since the 1950s. It is hypothesized that the increase is due to doubling of the nutrient loading from the Mississippi and Atchafalaya rivers and increased eutrophication on the shelf

Epeak estimator for Gamma-Ray Bursts Observed by the Swift Burst Alert Telescope

We report a correlation based on a spectral simulation study of the prompt emission spectra of gamma-ray bursts (GRBs) detected by the Swift Burst Alert Telescope (BAT). The correlation is between the Epeak energy, which is the peak energy in the \nu F_\nu spectrum, and the photon index (\Gamma) derived from a simple power-law model. The Epeak - \Gamma relation, assuming the typical smoothly broken power-law spectrum of GRBs, is \log Epeak = 3.258 - 0.829\Gamma (1.3 < \Gamma < 2.3). We take into account not only a range of Epeak energies and fluences, but also distributions for both the low-energy photon index and the high-energy photon index in the smoothly broken power-law model. The distribution of burst durations in the BAT GRB sample is also included in the simulation. Our correlation is consistent with the index observed by BAT and Epeak measured by the BAT, and by other GRB instruments. Since about 85% of GRBs observed by the BAT are acceptably fit with the simple power-law model because of the relatively narrow energy range of the BAT, this relationship can be used to estimate Epeak when it is located within the BAT energy range.Comment: 27 pages, 31 figures, accepted for publication in Ap

A contemporaneous infrared flash from a long gamma-ray burst: an echo from the central engine

The explosion that results in a cosmic gamma-ray burst (GRB) is thought to produce emission from two physical processes -- the activity of the central engine gives rise to the high-energy emission of the burst through internal shocking and the subsequent interaction of the flow with the external environment produces long-wavelength afterglow. While afterglow observations continue to refine our understanding of GRB progenitors and relativistic shocks, gamma-ray observations alone have not yielded a clear picture of the origin of the prompt emission nor details of the central engine. Only one concurrent visible-light transient has been found and was associated with emission from an external shock. Here we report the discovery of infrared (IR) emission contemporaneous with a GRB, beginning 7.2 minutes after the onset of GRB 041219a. Our robotic telescope acquired 21 images during the active phase of the burst, yielding the earliest multi-colour observations of any long-wavelength emission associated with a GRB. Analysis of an initial IR pulse suggests an origin consistent with internal shocks. This opens a new possibility to study the central engine of GRBs with ground-based observations at long wavelengths.Comment: Accepted to Nature on March 1, 2005. 9 pages, 4 figures, nature12.cls and nature1.cls files included. This paper is under press embargo until print publicatio

SWIFT Discovery of Gamma-ray Bursts without Jet Break Feature in their X-ray Afterglows

We analyze Swift gamma-ray bursts (GRBs) and X-ray afterglows for three GRBs with spectroscopic redshift determinations - GRB 050401, XRF 050416a, and GRB 050525a. We find that the relation between spectral peak energy and isotropic energy of prompt emissions (the Amati relation) is consistent with that for the bursts observed in pre-Swift era. However, we find that the X-ray afterglow lightcurves, which extend up to 10 - 70 days, show no sign of the jet break that is expected in the standard framework of collimated outflows. We do so by showing that none of the X-ray afterglow lightcurves in our sample satisfies the relation between the spectral and temporal indices that is predicted for the phase after jet break. The jet break time can be predicted by inverting the tight empirical relation between the peak energy of the spectrum and the collimation-corrected energy of the prompt emission (the Ghirlanda relation). We find that there are no temporal breaks within the predicted time intervals in X-ray band. This requires either that the Ghirlanda relation has a larger scatter than previously thought, that the temporal break in X-rays is masked by some additional source of X-ray emission, or that it does not happen because of some unknown reason

Disaggregated Compute, Memory and Network Systems: A New Era for Optical Data Centre Architectures

The disaggregated dRedBox Data Centre architecture is proposed that enables dynamic allocation of pooled compute and memory resources. An orchestration platform is described and algorithms are simulated that demonstrate the efficient utilization of IT infrastructure

HUWE1 E3 ligase promotes PINK1/PARKINindependent mitophagy by regulating AMBRA1 activation via IKKa

The selective removal of undesired or damaged mitochondria by autophagy, known as mitophagy, is crucial for cellular homoeostasis, and prevents tumour diffusion, neurodegeneration and ageing. The pro-autophagic molecule AMBRA1 (autophagy/beclin-1 regulator-1) has been defined as a novel regulator of mitophagy in both PINK1/PARKIN-dependent and -independent systems. Here, we identified the E3 ubiquitin ligase HUWE1 as a key inducing factor in AMBRA1-mediated mitophagy, a process that takes place independently of the main mitophagy receptors. Furthermore, we show that mitophagy function of AMBRA1 is post-translationally controlled, upon HUWE1 activity, by a positive phosphorylation on its serine 1014. This modification is mediated by the IKKα kinase and induces structural changes in AMBRA1, thus promoting its interaction with LC3/GABARAP (mATG8) proteins and its mitophagic activity. Altogether, these results demonstrate that AMBRA1 regulates mitophagy through a novel pathway, in which HUWE1 and IKKα are key factors, shedding new lights on the regulation of mitochondrial quality control and homoeostasis in mammalian cells

Analysis of Cancer Mutation Signatures in Blood by a Novel Ultra-Sensitive Assay: Monitoring of Therapy or Recurrence in Non-Metastatic Breast Cancer

BACKGROUND: Tumor DNA has been shown to be present both in circulating tumor cells in blood and as fragments in the plasma of metastatic cancer patients. The identification of ultra-rare tumor-specific mutations in blood would be the ultimate marker to measure efficacy of cancer therapy and/or early recurrence. Herein we present a method for detecting microinsertions/deletions/indels (MIDIs) at ultra-high analytical selectivity. MIDIs comprise about 15% of mutations. METHODS AND FINDINGS: We describe MIDI-Activated Pyrophosphorolysis (MAP), a method of ultra-high analytical selectivity for detecting MIDIs. The high analytical selectivity of MAP is putatively due to serial coupling of two rare events: heteroduplex slippage and mis-pyrophosphorolysis. MAP generally has an analytical selectivity of one mutant molecule per >1 billion wild type molecules and an analytical sensitivity of one mutant molecule per reaction. The analytical selectivity of MAP is about 100,000-fold better than that of our previously described method of Pyrophosphorolysis Activated Polymerization-Allele specific amplification (PAP-A) for detecting MIDIs. The utility of this method is illustrated in two ways. 1) We demonstrate that two EGFR deletions commonly found in lung cancers are not present in tissue from four normal human lungs (10(7) copies of gDNA each) or in blood samples from 10 healthy individuals (10(7) copies of gDNA each). This is inconsistent, at least at an analytical sensitivity of 10(-7), with the hypotheses of (a) hypermutation or (b) strong selection of these growth factor-mutated cells during normal lung development leads to accumulation of pre-neoplastic cells with these EGFR mutations, which sometimes can lead to lung cancer in late adulthood. Moreover, MAP was used for large scale, high throughput "gene pool" analysis. No germline or early embryonic somatic mosaic mutation was detected (at a frequency of >0.3%) for the 15/18 bp EGFR deletion mutations in 6,400 individuals, suggesting that early embryonic EGFR somatic mutation is very rare, inconsistent with hypermutation or strong selection of these deletions in the embryo. 2) The second illustration of MAP utility is in personalized monitoring of therapy and early recurrence in cancer. Tumor-specific p53 mutations identified at diagnosis in the plasma of six patients with stage II and III breast cancer were undetectable after therapy in four women, consistent with clinical remission, and continued to be detected after treatment in two others, reflecting tumor progression. CONCLUSIONS: MAP has an analytical selectivity of one part per billion for detection of MIDIs and an analytical sensitivity of one molecule. MAP provides a general tool for monitoring ultra-rare mutations in tissues and blood. As an example, we show that the personalized cancer signature in six out of six patients with non-metastatic breast cancer can be detected and that levels over time are correlated with the clinical course of disease

Zeta Inhibitory Peptide attenuates learning and memory by inducing NO-mediated downregulation of AMPA receptors

Zeta inhibitory peptide (ZIP), a PKMζ inhibitor, is widely used to interfere with the main- tenance of acquired memories. ZIP is able to erase memory even in the absence of PKMζ, via an unknown mechanism. We found that ZIP induces redistribution of the AMPARGluA1 in HEK293 cells and primary cortical neurons, and decreases AMPAR-mediated currents in the nucleus accumbens (NAc). These effects were mimicked by free arginine or by a modified ZIP in which all but the arginine residues were replaced by alanine. Redistribution was blocked by a peptidase-resistant version of ZIP and by treatment with the nitric oxide (NO)- synthase inhibitor L-NAME. ZIP increased GluA1-S831 phosphorylation and ZIP-induced redistribution was blocked by nitrosyl-mutant GluA1-C875S or serine-mutant GluA1-S831A. Introducing the cleavable arginine-alanine peptide into the NAc attenuated expression of cocaine-conditioned reward. Together, these results suggest that ZIP may act as an arginine donor, facilitating NO-dependent downregulation of AMPARs, thereby attenuating learning and memory