MicroRNA Profiling and Bioinformatics Target Analysis in Dorsal Hippocampus of Chronically Stressed Rats: Relevance to Depression Pathophysiology

Indexación: Scopus.1Laboratory of Neuroplasticity and Neurogenetics, Faculty of Chemical and Pharmaceutical Sciences, Department of Biochemistry and Molecular Biology, Universidad de Chile, Santiago, Chile, 2National Institute of Environmental Health Sciences, National Institutes of Health, Department of Health and Human Services, Durham, NC, United States, 3Centro de Genómica y Bioinformática, Facultad de Ciencias, Universidad Mayor, Santiago, Chile, 4Millennium Institute for Integrative Biology (iBio), FONDAP Center for Genome Regulation, Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Santiago, Chile, 5Department of Kinesiology, Faculty of Health Sciences, Universidad Católica del Maule, Talca, Chile, 6Escuela de Química y Farmacia, Facultad de Medicina, Universidad Andres Bello, Santiago, Chile.This study was supported by the following grants: FONDECYT 1120528 (JLF), Fondo Central de Investigación, Universidad de Chile ENL025/16 (JLF), ES090079 (JAC). Research in RG and EV laboratories is funded by Instituto Milenio iBio – Iniciativa Científica Milenio MINECON.Studies conducted in rodents subjected to chronic stress and some observations in humans after psychosocial stress, have allowed to establish a link between stress and the susceptibility to many complex diseases, including mood disorders. The studies in rodents have revealed that chronic exposure to stress negatively affects synaptic plasticity by triggering changes in the production of trophic factors, subunit levels of glutamate ionotropic receptors, neuron morphology, and neurogenesis in the adult hippocampus. These modifications may account for the impairment in learning and memory processes observed in chronically stressed animals. It is plausible then, that stress modifies the interplay between signal transduction cascades and gene expression regulation in the hippocampus, therefore leading to altered neuroplasticity and functioning of neural circuits. Considering that miRNAs play an important role in post-transcriptional-regulation of gene expression and participate in several hippocampus-dependent functions; we evaluated the consequences of chronic stress on the expression of miRNAs in dorsal (anterior) portion of the hippocampus, which participates in memory formation in rodents. Here, we show that male rats exposed to daily restraint stress (2.5 h/day) during 7 and 14 days display a differential profile of miRNA levels in dorsal hippocampus and remarkably, we found that some of these miRNAs belong to the miR-379-410 cluster. We confirmed a rise in miR-92a and miR-485 levels after 14 days of stress by qPCR, an effect that was not mimicked by chronic administration of corticosterone (14 days). Our in silico study identified the top-10 biological functions influenced by miR-92a, nine of which were shared with miR-485: Nervous system development and function, Tissue development, Behavior, Embryonic development, Organ development, Organismal development, Organismal survival, Tissue morphology, and Organ morphology. Furthermore, our in silico study provided a landscape of potential miRNA-92a and miR-485 targets, along with relevant canonical pathways related to axonal guidance signaling and cAMP signaling, which may influence the functioning of several neuroplastic substrates in dorsal hippocampus. Additionally, the combined effect of miR-92a and miR-485 on transcription factors, along with histone-modifying enzymes, may have a functional relevance by producing changes in gene regulatory networks that modify the neuroplastic capacity of the adult dorsal hippocampus under stress. © 2018 Muñoz-Llanos, García-Pérez, Xu, Tejos-Bravo, Vidal, Moyano, Gutiérrez, Aguayo, Pacheco, García-Rojo, Aliaga, Rojas, Cidlowski and Fiedler.https://www.frontiersin.org/articles/10.3389/fnmol.2018.00251/ful

Refraction of Electromagnetic Energy for Wave Packets Incident on a Negative Index Medium is Always Negative

We analyze refraction of electromagnetic wave packets on passing from an isotropic positive to an isotropic negative refractive index medium. We definitively show that in all cases the energy is always refracted negatively. For localized wave packets, the group refraction is also always negative.Comment: 5 pages, 3 figure

Resonant and anti-resonant frequency dependence of the effective parameters of metamaterials

We present a numerical study of the electromagnetic response of the metamaterial elements that are usedto construct materials with negative refractive index. For an array of split ring resonators (SRR) we find that the resonant behavior of the effective magnetic permeability is accompanied by an anti-resonant behavior of the effective permittivity. In addition, the imaginary parts of the effective permittivity and permeability are opposite in sign. We also observe an identical resonant versus anti-resonant frequency dependence of the effective materials parameters for a periodic array of thin metallic wires with cuts placed periodically along the length of the wire, with roles of the permittivity and permeability reversed from the SRR case. We show in a simple manner that the finite unit cell size is responsible for the anti-resonant behavior

Parameters extraction of single diode model for degraded photovoltaic modules

The single–diode model is widely used for the analysis of photovoltaic systems and reproducing accurately the I–V curve. Numerical or analytical methods can be employed to estimate the model parameters; among them explicit methods are well assessed providing precise results and low computational complexity, thus suitable to be developed on embedded systems. Due to their approximated nature, the accuracy of such methods may be affected by the operating conditions and by the state of health of the photovoltaic modules that have been characterised. The main contribution of this paper is to analyse a selection of explicit methods with the aim of testing their capability to detect degradation in photovoltaic modules. Since different degradation phenomena are reflected in a variation of the series resistance of the single diode equivalent circuit, the study is mainly focused on the estimation of this parameter. The comparison of different explicit methods has been done by using outdoor experimental I–V curves of a photovoltaic module operating in normal as well as degraded conditions. The analysis shows that only few methods exhibit enough reliability to estimate correctly the model parameters in presence of degradation and are less sensible to the environmental operating conditions.This work has been supported by MIUR funds in the frame of PRIN 2017-Holistic approach to EneRgy-efficient smart nanOGRIDS (HEROGRIDS) project (2017WA5ZT3 003 ), and by FARB funds of the University of Salerno. In addition, some resources are due to the project RTI2018–095097–B–I00 of the Ministerio de Ciencia, Innovación y Universidades, Spai

Behavior of the giant-dipole resonance in 120^{120}Sn and 208^{208}Pb at high excitation energ

The properties of the giant-dipole resonance (GDR) are calculated as a function of excitation energy, angular momentum, and the compound nucleus particle decay width in the nuclei $^{120}$Sn and $^{208}$Pb, and are compared with recent experimental data. Differences observed in the behavior of the full-width-at-half-maximum of the GDR for $^{120}$Sn and $^{208}$Pb are attributed to the fact that shell corrections in $^{208}$Pb are stronger than in $^{120}$Sn, and favor the spherical shape at low temperatures. The effects shell corrections have on both the free energy and the moments of inertia are discussed in detail. At high temperature, the FWHM in $^{120}$Sn exhibits effects due to the evaporation width of the compound nucleus, while these effects are predicted for $^{208}$Pb.Comment: 28 pages in RevTeX plus eight postscript figures. Submitted to Nucl. Phys.

Type II compactifications on manifolds with SU(2) x SU(2) structure

We study compactifications of type II theories on SU(2) x SU(2) structure manifolds to six, five and four spacetime dimensions. We use the framework of generalized geometry to describe the NS-NS sector of such compactifications and derive the structure of their moduli spaces. We show that in contrast to SU(3) x SU(3) structure compactifications, there is no dynamical SU(2) x SU(2) structure interpolating between an SU(2) structure and an identity structure. Furthermore, we formulate type II compactifications on SU(2) x SU(2) structures in the context of exceptional generalized geometry which makes the U-duality group manifest and naturally incorporates the scalar degrees of freedom arising in the Ramond-Ramond sector. Via this formalism we derive the structure of the moduli spaces as it is expected from N=4 supergravity.Comment: 69 pages, v2 published versio

Electromagnetic-field quantization and spontaneous decay in left-handed media

We present a quantization scheme for the electromagnetic field interacting with atomic systems in the presence of dispersing and absorbing magnetodielectric media, including left-handed material having negative real part of the refractive index. The theory is applied to the spontaneous decay of a two-level atom at the center of a spherical free-space cavity surrounded by magnetodielectric matter of overlapping band-gap zones. Results for both big and small cavities are presented, and the problem of local-field corrections within the real-cavity model is addressed.Comment: 15 pages, 5 figures, RevTe

Indirect search for dark matter: prospects for GLAST

Possible indirect detection of neutralino, through its gamma-ray annihilation product, by the forthcoming GLAST satellite from our galactic halo, M31, M87 and the dwarf galaxies Draco and Sagittarius is studied. Gamma-ray fluxes are evaluated for the two representative energy thresholds, 0.1 GeV and 1.0 GeV, at which the spatial resolution of GLAST varies considerably. Apart from dwarfs which are described either by a modified Plummer profile or by a tidally-truncated King profiles, fluxes are compared for halos with central cusps and cores. It is demonstrated that substructures, irrespective of their profiles, enhance the gamma-ray emission only marginally. The expected gamma-ray intensity above 1 GeV at high galactic latitudes is consistent with the residual emission derived from EGRET data if the density profile has a central core and the neutralino mass is less than 50 GeV, whereas for a central cusp only a substantial enhancement would explain the observations. From M31, the flux can be detected above 0.1 GeV and 1.0 GeV by GLAST only if the neutralino mass is below 300 GeV and if the density profile has a central cusp, case in which a significant boost in the gamma-ray emission is produced by the central black hole. For Sagittarius, the flux above 0.1 GeV is detectable by GLAST provided the neutralino mass is below 50 GeV. From M87 and Draco the fluxes are always below the sensitivity limit of GLAST.Comment: 14 Pages, 7 Figures, 3 Tables, version to appear on Physical Review

Using Simulation to Assess the Opportunities of Dynamic Waste Collection

In this paper, we illustrate the use of discrete event simulation to evaluate how dynamic planning methodologies can be best applied for the collection of waste from underground containers. We present a case study that took place at the waste collection company Twente Milieu, located in The Netherlands. Even though the underground containers are already equipped with motion sensors, the planning of container emptying’s is still based on static cyclic schedules. It is expected that the use of a dynamic planning methodology, that employs sensor information, will result in a more efficient collection process with respect to customer satisfaction, profits, and CO2 emissions. In this research we use simulation to (i) evaluate the current planning methodology, (ii) evaluate various dynamic planning possibilities, (iii) quantify the benefits of switching to a dynamic collection process, and (iv) quantify the benefits of investing in fill‐level sensors. After simulating all scenarios, we conclude that major improvements can be achieved, both with respect to logistical costs as well as customer satisfaction