8 research outputs found

    MP2RAGE, a self bias-field corrected sequence for improved segmentation and T1-mapping at high field.

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    The large spatial inhomogeneity in transmit B(1) field (B(1)(+)) observable in human MR images at high static magnetic fields (B(0)) severely impairs image quality. To overcome this effect in brain T(1)-weighted images, the MPRAGE sequence was modified to generate two different images at different inversion times, MP2RAGE. By combining the two images in a novel fashion, it was possible to create T(1)-weighted images where the result image was free of proton density contrast, T(2) contrast, reception bias field, and, to first order, transmit field inhomogeneity. MP2RAGE sequence parameters were optimized using Bloch equations to maximize contrast-to-noise ratio per unit of time between brain tissues and minimize the effect of B(1)(+) variations through space. Images of high anatomical quality and excellent brain tissue differentiation suitable for applications such as segmentation and voxel-based morphometry were obtained at 3 and 7 T. From such T(1)-weighted images, acquired within 12 min, high-resolution 3D T(1) maps were routinely calculated at 7 T with sub-millimeter voxel resolution (0.65-0.85 mm isotropic). T(1) maps were validated in phantom experiments. In humans, the T(1) values obtained at 7 T were 1.15+/-0.06 s for white matter (WM) and 1.92+/-0.16 s for grey matter (GM), in good agreement with literature values obtained at lower spatial resolution. At 3 T, where whole-brain acquisitions with 1 mm isotropic voxels were acquired in 8 min, the T(1) values obtained (0.81+/-0.03 s for WM and 1.35+/-0.05 for GM) were once again found to be in very good agreement with values in the literature

    Spatial organization of frequency preference and selectivity in the human inferior colliculus

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    To date, the functional organization of human auditory subcortical structures can only be inferred from animal models. Here we use high-resolution functional magnetic resonance imaging at ultra-high magnetic fields (7T) to map the organization of spectral responses in the human inferior colliculus, a subcortical structure fundamental for sound processing. We reveal a tonotopic map with a spatial gradient of preferred frequencies approximately oriented from dorsolateral (low frequencies) to ventromedial (high frequencies) locations. Furthermore, we observe a spatial organization of spectral selectivity (tuning) of functional magnetic resonance imaging responses in the human inferior colliculus. Along isofrequency contours, functional magnetic resonance imaging tuning is narrowest in central locations and broadest in the surrounding regions. Finally, by comparing subcortical and cortical auditory areas we show that functional magnetic resonance imaging tuning is narrower in human inferior colliculus than on the cortical surface. Our findings pave the way to noninvasive investigations of sound processing in human subcortical nuclei and for studying the interplay between subcortical and cortical neuronal populations

    High-resolution mapping of myeloarchitecture in vivo: localization of auditory areas in the human brain

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    The precise delineation of auditory areas in vivo remains problematic. Histological analysis of postmortem tissue indicates that the relation of areal borders to macroanatomical landmarks is variable across subjects. Furthermore, functional parcellation schemes based on measures of, for example, frequency preference (tonotopy) remain controversial. Here, we propose a 7 Tesla magnetic resonance imaging method that enables the anatomical delineation of auditory cortical areas in vivo and in individual brains, through the high-resolution visualization (0.6 x 0.6 x 0.6 mm(3)) of intracortical anatomical contrast related to myelin. The approach combines the acquisition and analysis of images with multiple MR contrasts (T-1, T-2*, and proton density). Compared with previous methods, the proposed solution is feasible at high fields and time efficient, which allows collecting myelin-related and functional images within the same measurement session. Our results show that a data-driven analysis of cortical depth-dependent profiles of anatomical contrast allows identifying a most densely myelinated cortical region on the medial Heschl's gyrus. Analyses of functional responses show that this region includes neuronal populations with typical primary functional properties (single tonotopic gradient and narrow frequency tuning), thus indicating that it may correspond to the human homolog of monkey A1

    Spin echo functional MRI in bilateral auditory cortices at 7T: An application of B(1) shimming

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    Ultra high fields (UHF) permit unprecedented explorations of functional organizations and insight into basic neuronal processes. Increases in the signal and contrast to noise ratios have allowed increases in the spatial resolution of T(2)() weighted gradient echo (GE) echo planar imaging (EPI). Furthermore, while the use of T(2) weighted imaging methods at UHF (e.g. spin echo (SE) EPI, gradient and spin echo (GRASE) EPI) can also permit higher resolution images, they in addition allow for increased spatial specificity of functional responses, permitting the in-vivo study of functional organizations down to the columnar level of the cortex. The study of the visual cortex has, thus far, benefitted the most from higher resolution T(2) weighted studies as achieving the required transmit B(1) magnitude at 7T is more challenging in other brain regions, such as the auditory cortex. As such, auditory fMRI studies at UHF have been limited to T(2)* weighted GE sequences. Recent advances in multi-channel RF transmission (e.g. B(1) shimming) have enabled procedures to efficiently address deficiencies in transmit B(1) profiles. However, these techniques, shown to be advantageous in anatomical imaging at UHF, are not generally utilized to facilitate T(2) weighted fMRI studies. Here we investigate the feasibility of applying B(1) shimming to achieve efficient RF transmission in the human auditory cortex. We demonstrate that, with B(1) shimming, functional responses to simple tones and to complex sounds (i.e. voices, speech, animal cries, tools and nature) can be efficiently measured with T(2) weighted SE-EPI in the bilateral human auditory cortex at 7T without exceeding specific absorption rate (SAR) limits

    Whole brain high-resolution functional imaging at ultra high magnetic fields: an application to the analysis of resting state networks

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    Whole-brain functional magnetic resonance imaging (fMRI) allows measuring brain dynamics at all brain regions simultaneously and is widely used in research and clinical neuroscience to observe both stimulus-related and spontaneous neural activity. Ultrahigh magnetic fields (7T and above) allow functional imaging with high contrast-to-noise ratios and improved spatial resolution and spatial specificity compared to clinical fields (1.5T and 3T). High-resolution 7T fMRI, however, has been mostly limited to partial brain coverage with previous whole-brain applications sacrificing either the spatial or temporal resolution. Here we present whole-brain high-resolution (1, 1.5 and 2 mm isotropic voxel) resting state fMRI at 7T, obtained with parallel imaging technology, without sacrificing temporal resolution or brain coverage, over what is typically achieved at 3T with several fold larger voxel volumes. Using Independent Component Analysis we demonstrate that high resolution images acquired at 7T retain enough sensitivity for the reliable extraction of typical resting state brain networks and illustrate the added value of obtaining both single subject and group maps, obtained using cortex based alignment, of the default-mode network (DMN) with high native resolution. By comparing results between multiple resolutions we show that the smaller voxels volumes (1 and 1.5 mm isotropic) data result in reduced partial volume effects, permitting separations of detailed spatial features within the DMN patterns as well as a better function to anatomy correspondence
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