Intrawave observations of sediment entrainment processes above sand ripples under irregular waves

Measurements of intrawave sediment entrainment processes are reported above ripples under irregular waves generated in a large-scale flume facility. The data consist of substantive observations of small-scale processes collected at high spatial and temporal resolution under irregular wave forcing, typical of coastal environments. Acoustic measurements were made of water velocities, bed forms, and suspended sediment concentration over plane and rippled beds. During each rippled bed experiment, measurements were taken over the crests of steep sided ripples, above which flow separation was considered likely to occur. Above the ripple crests, a strong intrawave variation in the near-bed suspended sediment, indicative of vortex formation and shedding, was observed to dominate wave half cycles where the orbital diameter was greater than 1.2 times the ripple wavelength lambda. The irregular waves were parameterized with a significant wave height H-s and a significant orbital diameter d(0s). Thus, during irregular wave conditions and over steep ripples where d(0s)/lambda > 1.2, vortex shedding was deemed as the dominant sediment entrainment process. Furthermore, the percentage of wave half cycles where vortex shedding was observed, was found to scale as 26 d(0s)/lambda. These results demonstrate, for under irregular waves, the existence of a clear suspended sediment structure consistent with vortex shedding, previously observed under regular wave

Geographical distribution and diversity of moderately thermophilic members of the thermoplasmatales

Oxidation of ferrous iron by moderately thermophilic species of the genus Ferroplasma is of considerable potential value in commercial bioleaching operations. A collection of strains was enriched and isolated from a number of natural or industrial acidic sites at 45 and 55°C. Phylogenetic analysis based on 16S rRNA gene sequencing indicated that all strains were members of the Order Thermoplasmatales. Stains BH8 and BH12 showed 98% sequence similarity with Ferroplasma acidiphilum strain YT and DR1 respectively. Strains BH7 and BH10 were closely related to the moderately thermophilic species Ferroplasma cupricumulans. Strain BH9, a moderately thermophilic organotroph, was unrelated to previously described species and probably represents a novel genus. Strains BH8 and BH12 showed some unique physiological differences to the type species F. acidiphilum. Unlike F. acidiphilum, both strains were moderately thermophilic with a temperature range for strains BH8 and BH12 of 24 to 61°C and 27 to 49°C respectively. Strain BH12 grew organotrophically on Darland's Medium containing glucose and yeast extract and chemomixotrophically on Darland's Medium supplemented with ferrous sulphate. Moderately thermophilic species of Ferroplasma and Ferroplasma-like genera appear widely distributed geographically and possess considerable physiological and phylogenetic diversity that may benefit industrial bioleaching processes

Latitudinal Patterns in Tachinid Parasitoid Diversity (Diptera: Tachinidae): A Review of the Evidence

Insect parasitoids may be an exception to the typical biogeographic pattern of increasing species richness at lower latitudes exhibited by most taxa. Evidence for this ‘anomalous’ latitudinal gradient has been derived from observations of hymenopteran parasitoids and it has been argued that other parasitoid groups should show a similar pattern of diversity. Several mechanisms have been proposed to explain this disparity, most notably the nasty host and resource fragmentation hypotheses. We review and evaluate these hypotheses with respect to tachinid flies (Diptera: Tachinidae), and bring to the argument evidence from eight trapping surveys from temperate and tropical regions in the Americas including the United States, Costa Rica, and Ecuador. We find no evidence that tachinid fly diversity is lower in the tropics than in the temperate region. Our results, along with other lines of evidence, rather suggest that New World Tachinidae likely conform to the same negative relationship between latitude and richness as their largely phytophagous host taxa. We discuss geographic patterns of tachinid diversity in relation to ecological and evolutionary processes, and why they may differ from their hymenopteran parasitoid counterparts. Parasitoid taxa appear to vary strongly in their diversity responses to latitude and we concur with previous researchers that more survey data are necessary to reach strong conclusions about parasitoid latitudinal diversity patterns

Impacts of anthropogenic noise on marine life: Publication patterns, new discoveries, and future directions in research and management

Anthropogenic underwater noise is now recognized as a world-wide problem, and recent studies have shown a broad range of negative effects in a variety of taxa. Underwater noise from shipping is increasingly recognized as a significant and pervasive pollutant with the potential to impact marine ecosystems on a global scale. We reviewed six regional case studies as examples of recent research and management activities relating to ocean noise in a variety of taxonomic groups, locations, and approaches. However, as no six projects could ever cover all taxa, sites and noise sources, a brief bibliometric analysis places these case studies into the broader historical and topical context of the peer-reviewed ocean noise literature as a whole. The case studies highlighted emerging knowledge of impacts, including the ways that non-injurious effects can still accumulate at the population level, and detailed approaches to guide ocean noise management. They build a compelling case that a number of anthropogenic noise types can affect a variety of marine taxa. Meanwhile, the bibliometric analyses revealed an increasing diversity of ocean noise topics covered and journal outlets since the 1940s. This could be seen in terms of both the expansion of the literature from more physical interests to ecological impacts of noise, management and policy, and consideration of a widening range of taxa. However, if our scientific knowledge base is ever to get ahead of the curve of rapid industrialization of the ocean, we are going to have to identify naïve populations and relatively pristine seas, and construct mechanistic models, so that we can predict impacts before they occur, and guide effective mitigation for the most vulnerable populations