Complete restoration of multiple dystrophin isoforms in genetically corrected Duchenne muscular dystrophy patient–derived cardiomyocytes

Duchenne muscular dystrophy (DMD)–associated cardiac diseases are emerging as a major cause of morbidity and mortality in DMD patients, and many therapies for treatment of skeletal muscle failed to improve cardiac function. The reprogramming of patients' somatic cells into pluripotent stem cells, combined with technologies for correcting the genetic defect, possesses great potential for the development of new treatments for genetic diseases. In this study, we obtained human cardiomyocytes from DMD patient–derived, induced pluripotent stem cells genetically corrected with a human artificial chromosome carrying the whole dystrophin genomic sequence. Stimulation by cytokines was combined with cell culturing on hydrogel with physiological stiffness, allowing an adhesion-dependent maturation and a proper dystrophin expression. The obtained cardiomyocytes showed remarkable sarcomeric organization of cardiac troponin T and α-actinin, expressed cardiac-specific markers, and displayed electrically induced calcium transients lasting less than 1 second. We demonstrated that the human artificial chromosome carrying the whole dystrophin genomic sequence is stably maintained throughout the cardiac differentiation process and that multiple promoters of the dystrophin gene are properly activated, driving expression of different isoforms. These dystrophic cardiomyocytes can be a valuable source for in vitro modeling of DMD-associated cardiac disease. Furthermore, the derivation of genetically corrected, patient-specific cardiomyocytes represents a step toward the development of innovative cell and gene therapy approaches for DMD

Dynamics of epigenetic regulation at the single-cell level

Chromatin regulators play a major role in establishing and maintaining gene expression states. Yet how they control gene expression in single cells, quantitatively and over time, remains unclear. We used time-lapse microscopy to analyze the dynamic effects of four silencers associated with diverse modifications: DNA methylation, histone deacetylation, and histone methylation. For all regulators, silencing and reactivation occurred in all-or-none events, enabling the regulators to modulate the fraction of cells silenced rather than the amount of gene expression. These dynamics could be described by a three-state model involving stochastic transitions between active, reversibly silent, and irreversibly silent states. Through their individual transition rates, these regulators operate over different time scales and generate distinct types of epigenetic memory. Our results provide a framework for understanding and engineering mammalian chromatin regulation and epigenetic memory

Regulation of functional KCNQ1OT1 lncRNA by β-catenin.

Long noncoding RNAs (lncRNAs) have been implicated in many biological processes through epigenetic mechanisms. We previously reported that KCNQ1OT1, an imprinted antisense lncRNA in the human KCNQ1 locus on chromosome 11p15.5, is involved in cis-limited silencing within an imprinted KCNQ1 cluster. Furthermore, aberration of KCNQ1OT1 transcription was observed with a high frequency in colorectal cancers. However, the molecular mechanism of the transcriptional regulation and the functional role of KCNQ1OT1 in colorectal cancer remain unclear. Here, we show that the KCNQ1OT1 transcriptional level was significantly increased in human colorectal cancer cells in which β-catenin was excessively accumulated in the nucleus. Additionally, overexpression of β-catenin resulted in an increase in KCNQ1OT1 lncRNA-coated territory. On the other hand, knockdown of β-catenin resulted in significant decrease of KCNQ1OT1 lncRNA-coated territory and an increase in the mRNA expression of the SLC22A18 and PHLDA2 genes that are regulated by KCNQ1OT1. We showed that β-catenin can promote KCNQ1OT1 transcription through direct binding to the KCNQ1OT1 promoter. Our evidence indicates that β-catenin signaling may contribute to development of colorectal cancer by functioning as a novel lncRNA regulatory factor via direct targeting of KCNQ1OT1

The defect in the AT-like hamster cell mutants is complemented by mouse chromosome 9 but not by any of the human chromosomes

X-ray-sensitive Chinese hamster V79 cells mutants, V-C4, V-E5 and V-G8, show an abnormal response to X-ray-induced DNA damage. Like ataxia telangiectasia (AT) cells, they display increased cell killing, chromosomal instability and a diminished inhibition of DNA synthesis following ionizing radiation. To localize the defective hamster gene (XRCC8) on the human genome, human chromosomes were introduced into the AT-like hamster mutants, by microcell mediated chromosome transfer. Although, none of the human chromosomes corrected the defect in these mutants, the defect was corrected by a single mouse chromosome, derived from the A9 microcell donor cell line. In four independent X-ray-resistant microcell hybrid clones of V-E5, the presence of the mouse chromosome was determined by fluorescent in situ hybridization, using a mouse cot-1 probe. By PCR analysis with primers specific for different mouse chromosomes and Southern blot analysis with the mouse Ldlr probe, the mouse chromosome 9, was identified in all four X-ray-resistant hybrid clones. Segregation of the mouse chromosome 9 from these hamster-mouse microcell hybrids led to the loss of the regained X-ray-resistance, confirming that mouse chromosome 9 is responsible for complementation of the defect in V-E5 cells. The assignment of the mouse homolog of the ATM gene to mouse chromosome 9, and the presence of this mouse chromosome only in the radioresistant hamster cell hybrids suggest that the hamster AT-like mutants are homologous to AT, although they are not complemented by human chromosome 11

Effect of a peptide in cosmetic formulations for hair volume control

Objective The capacity of hair to absorb water causes changes in its physical and cosmetic properties under different environmental conditions. Hence, the control of hair volume in variable relative humidity settings is an important topic in cosmetics. The behaviour of two types of hair, Caucasian and Asian, was studied regarding their volume change in different relative humidity conditions. The ability of a peptide as a hair volume treatment was evaluated in two climate control formulations. Methods Tresses of the two types of hair were tested in two relative humidity (RH) conditions: (A) variable relative humidity (2 hours 40% RH, followed by 2 hours 90% RH and 2 hours of 40% RH), and (B) continuous high relative humidity (90% RH for 6 hours). Changes in the hair tress volume were assessed throughout time. Hair treated with two climate control formulations, with and without a peptide (KP peptide), were tested under the two relative humidity conditions. Results Caucasian hair had a higher change in volume compared to the Asian hair in variable and high relative humidity conditions. The hair volume increase when subject to high air humidity, and it was lower with the incorporation of a peptide into climate control formulations. Conclusion Caucasian hair showed higher volume than Asian hair when submitted to both relative humidity conditions. The incorporation of the peptide into the climate control formulations, a base (mostly composed of water 94%) and an ethanolic, was found to reduce the volume of Caucasian hair tresses. The presence of the peptide improved the hair volume change more than 60% in high relative humidity conditions.We thank the Industry and Processes Laboratory (LIP) from Centre of Biological Engineering (CEB) for allowing the use of the climate chamber Binder KBF 115. This work was supported by the Portuguese Foundation for Science and Technology (FCT) under the scope of the strategic funding of UID/BIO/04469/2013 unit and COMPETE 2020 (POCI01-0145-FEDER-006684) and under the Project RECI/BBB-EBI/ 0179/2012 (FCOMP-01-0124-FEDER-027462). This study was also supported by BioTecNorte operation (NORTE-01-0145-FEDER000004) funded by the European Regional Development Fund under the scope of Norte2020 – Programa Operacional Regional do Norte. C elia F. Cruz and Artur Ribeiro thank FCT for SFRH/BD/ 100927/2014 and SFRH/BPD/98388/2013 grants, respectively.info:eu-repo/semantics/publishedVersio

Syndiotactic- and Heterotactic-Specific Radical Polymerizations of N-n-Propyl-α-fluoroacrylamide and Phase-Transition Behaviors of Aqueous Solutions of Poly(N-n-propyl-α-fluoroacrylamide)

Radical polymerization of N-n-propyl-α-fluoroacrylamide (NNPFAAm) was investigated in several solvents at low temperatures in the presence or absence of Lewis bases, Lewis acids, alkyl alcohols, silyl alcohols, or fluorinated alcohols. Different effects of solvents and additives on stereospecificity were observed in the radical polymerizations of NNPFAAm and its hydrocarbon analogs such as N-isopropylacrylamide (NIPAAm) and N-n-propylacrylamide (NNPAAm); for instance, syndiotactic (and heterotactic) specificities were induced in radical polymerization of NNPFAAm in polar solvents (and in toluene in the presence of alkyl and silyl alcohols), whereas isotactic (and syndiotactic) specificities were induced in radical polymerizations of the hydrocarbon analogs under the corresponding conditions. In contrast, heterotactic specificity induced by fluorinated alcohols was further enhanced in radical polymerization of NNPFAAm. The effects of stereoregularity on the phase-transition behaviors of aqueous solutions of poly(NNPFAAm) were also investigated. Different tendencies in stereoregularity were observed in aqueous solutions of poly(NNPFAAm)s from those in solutions of the hydrocarbon analogs such as poly(NIPAAm) and poly(NNPAAm). The polymerization behavior of NNPFAAm and the phase-transition behavior of aqueous poly(NNPFAAm) are discussed based on possible fluorine–fluorine repulsion between the monomer and propagating chain-end, and neighboring monomeric units

Re-engineering an alphoid-HAC-based vector to enable high-throughput analyses of gene function

Human artificial chromosome (HAC)-based vectors represent an alternative technology for gene delivery and expression with a potential to overcome the problems caused by the use of viral-based vectors. The recently developed alphoid(tetO)-HAC has an advantage over other HAC vectors because it can be easily eliminated from cells by inactivation of the HAC kinetochore via binding of tTS chromatin modifiers to its centromeric tetO sequences. This provides unique control for phenotypes induced by genes loaded into the alphoid(tetO)-HAC. However, inactivation of the HAC kinetochore requires transfection of cells by a retrovirus vector, a step that is potentially mutagenic. Here, we describe an approach to re-engineering the alphoid(tetO)-HAC that allows verification of phenotypic changes attributed to expression of genes from the HAC without a transfection step. In the new HAC vector, a tTS-EYFP cassette is inserted into a gene-loading site along with a gene of interest. Expression of the tTS generates a self-regulating fluctuating heterochromatin on the alphoid(tetO)-HAC that induces fast silencing of the genes on the HAC without significant effects on HAC segregation. This silencing of the HAC-encoded genes can be readily recovered by adding doxycycline. The newly modified alphoid(tetO)-HAC-based system has multiple applications in gene function studies

De-tert-butylation of poly(N-tert-butyl-N-n-propylacrylamide) : Stereochemical analysis at the triad level

The stereochemical analysis of polymers derived from N,N-disubstituted acrylamides is usually difficult. The diad tacticity can be determined from the 1H NMR signals of the main-chain methylene groups. However, the splitting because of the configurational sequences is poor, even in 13C NMR, which does not allow determination of the tacticity at the triad level. In contrast, the stereochemical analysis of polymers derived from N-monosubstituted acrylamides is easily conducted and the triad tacticity can be determined from the 13C signals of the main-chain methine groups. Thus, stereochemical analysis of N,N-disubstituted polymers should be able to be conducted if the polymers are transformed into N-monosubstituted polymers with retention of the configurational sequence. Poly(N-tert-butyl-N-n-propylacrylamide) [poly(TBNPAAm)] was radically prepared, and de-tert-butylation was conducted by treatment with Sc(OTf)3 in a mixed solvent of CH3CN and 1,4-dioxane at 50, 80, and 110 °C. 1H NMR analysis of the resulting polymers indicated quantitative conversion after 72 h, regardless of the temperature. 13C NMR analysis of the transformed polymers confirmed that the configurational sequences were retained during the reaction. Thus, the triad stereochemical analysis of N,N-disubstituted polymers was successfully conducted by de-tert-butylation as a polymer reaction, followed by 13C NMR analysis of the transformed polymers

Syndiotactic- and heterotactic-specific radical polymerization of N-n-propylmethacrylamide complexed with alkali metal ions

We investigated the radical polymerization of N-n-propylmethacrylamide (NNPMAAm) in the presence of alkali metal bis(trifluoromethanesulfonyl)imides (MNTf2), in particular LiNTf2. The addition of MNTf2 led to a significant improvement in the yield and molecular weight of the resulting poly(NNPMAAm)s. Furthermore, the solvent employed influenced stereospecificity in the presence of LiNTf2. The stoichiometry of the NNPMAAm–Li+ complex appeared to be critical to determining the stereospecificity in the NNPMAAm polymerization. The 1:1-complexed monomer in protic polar solvents provided syndiotactic-rich polymers, whereas the 2:1-complexed monomer in aprotic solvents gave heterotactic-rich polymers. Stereochemical analyses revealed that m-addition by an r-ended radical was the key step in the induction of heterotactic specificity in the aprotic solvents. Spectroscopic analyses suggested that the Li+ cation played a dual role in the polymerization process, with Li+ stabilizing the propagating radical species and also activating the incoming monomer. Kinetic studies with the aid of electron spin resonance spectroscopy revealed that the addition of LiNTf2 caused a significant increase in the kp value and a decrease in the kt value. The stereoregularity of poly(NNPMAAm)s was found to influence the phase transition behavior of their aqueous solutions. In a series of syndiotactic-rich polymers, the phase-transition temperature decreased gradually with increase in rr triad content. Furthermore, heterotactic-rich poly(NNPMAAm) exhibited high hysteresis, which increased in magnitude with increasing mr triad content