Unmanned aerial systems-based remote sensing for monitoring sorghum growth and development

Unmanned Aerial Vehicles and Systems (UAV or UAS) have become increasingly popular in recent years for agricultural research applications. UAS are capable of acquiring images with high spatial and temporal resolutions that are ideal for applications in agriculture. The objective of this study was to evaluate the performance of a UAS-based remote sensing system for quantification of crop growth parameters of sorghum (Sorghum bicolor L.) including leaf area index (LAI), fractional vegetation cover (fc) and yield. The study was conducted at the Texas A&M Research Farm near College Station, Texas, United States. A fixed-wing UAS equipped with a multispectral sensor was used to collect image data during the 2016 growing season (April±October). Flight missions were successfully carried out at 50 days after planting (DAP; 25 May), 66 DAP (10 June) and 74 DAP (18 June). These flight missions provided image data covering the middle growth period of sorghum with a spatial resolution of approximately 6.5 cm. Field measurements of LAI and fc were also collected. Four vegetation indices were calculated using the UAS images. Among those indices, the normalized difference vegetation index (NDVI) showed the highest correlation with LAI, fc and yield with R2 values of 0.91, 0.89 and 0.58 respectively. Empirical relationships between NDVI and LAI and between NDVI and fc were validated and proved to be accurate for estimating LAI and fc from UAS-derived NDVI values. NDVI determined from UAS imagery acquired during the flowering stage (74 DAP) was found to be the most highly correlated with final grain yield. The observed high correlations between UAS-derived NDVI and the crop growth parameters (fc, LAI and grain yield) suggests the applicability of UAS for withinseason data collection of agricultural crops such as sorghum

Unmanned Aerial Vehicles for High-Throughput Phenotyping and Agronomic Research

Advances in automation and data science have led agriculturists to seek real-time, high-quality, high-volume crop data to accelerate crop improvement through breeding and to optimize agronomic practices. Breeders have recently gained massive data-collection capability in genome sequencing of plants. Faster phenotypic trait data collection and analysis relative to genetic data leads to faster and better selections in crop improvement. Furthermore, faster and higher-resolution crop data collection leads to greater capability for scientists and growers to improve precision-agriculture practices on increasingly larger farms; e.g., site-specific application of water and nutrients. Unmanned aerial vehicles (UAVs) have recently gained traction as agricultural data collection systems. Using UAVs for agricultural remote sensing is an innovative technology that differs from traditional remote sensing in more ways than strictly higher-resolution images; it provides many new and unique possibilities, as well as new and unique challenges. Herein we report on processes and lessons learned from year 1-the summer 2015 and winter 2016 growing seasons-of a large multidisciplinary project evaluating UAV images across a range of breeding and agronomic research trials on a large research farm. Included are team and project planning, UAV and sensor selection and integration, and data collection and analysis workflow. The study involved many crops and both breeding plots and agronomic fields. The project's goal was to develop methods for UAVs to collect high-quality, high-volume crop data with fast turnaround time to field scientists. The project included five teams: Administration, Flight Operations, Sensors, Data Management, and Field Research. Four case studies involving multiple crops in breeding and agronomic applications add practical descriptive detail. Lessons learned include critical information on sensors, air vehicles, and configuration parameters for both. As the first and most comprehensive project of its kind to date, these lessons are particularly salient to researchers embarking on agricultural research with UAVs

Unmanned aerial systems-based remote sensing for monitoring sorghum growth and development

Unmanned Aerial Vehicles and Systems (UAV or UAS) have become increasingly popular in recent years for agricultural research applications. UAS are capable of acquiring images with high spatial and temporal resolutions that are ideal for applications in agriculture. The objective of this study was to evaluate the performance of a UAS-based remote sensing system for quantification of crop growth parameters of sorghum (Sorghum bicolor L.) including leaf area index (LAI), fractional vegetation cover (fc) and yield. The study was conducted at the Texas A&M Research Farm near College Station, Texas, United States. A fixed-wing UAS equipped with a multispectral sensor was used to collect image data during the 2016 growing season (April±October). Flight missions were successfully carried out at 50 days after planting (DAP; 25 May), 66 DAP (10 June) and 74 DAP (18 June). These flight missions provided image data covering the middle growth period of sorghum with a spatial resolution of approximately 6.5 cm. Field measurements of LAI and fc were also collected. Four vegetation indices were calculated using the UAS images. Among those indices, the normalized difference vegetation index (NDVI) showed the highest correlation with LAI, fc and yield with R2 values of 0.91, 0.89 and 0.58 respectively. Empirical relationships between NDVI and LAI and between NDVI and fc were validated and proved to be accurate for estimating LAI and fc from UAS-derived NDVI values. NDVI determined from UAS imagery acquired during the flowering stage (74 DAP) was found to be the most highly correlated with final grain yield. The observed high correlations between UAS-derived NDVI and the crop growth parameters (fc, LAI and grain yield) suggests the applicability of UAS for withinseason data collection of agricultural crops such as sorghum

Unmanned aerial systems-based remote sensing for monitoring sorghum growth and development - Fig 3

<p>(a) Relationship between normalized difference vegetation index (NDVI) and fraction cover (f_c); (b) Measured f_c vs. corresponding f_c values predicted using empirical equation in Fig 3A. The solid black diagonal line in the graph is the 1:1 line. The dashed black line is the least-squares linear regression between the measured and predicted values.</p

Unmanned aerial systems-based remote sensing for monitoring sorghum growth and development - Fig 3

<p>(a) Relationship between normalized difference vegetation index (NDVI) and fraction cover (f_c); (b) Measured f_c vs. corresponding f_c values predicted using empirical equation in Fig 3A. The solid black diagonal line in the graph is the 1:1 line. The dashed black line is the least-squares linear regression between the measured and predicted values.</p

Case_Study_4_weed_management_evaluation_Raw_Image_Data_10_of_10_GroundTruth

Part 10 of 10 of raw individual images with gps log and ground truth

Fractional vegetation cover (f_c) map of the sorghum field derived from UAS imagery acquired on 10 June 2016.

<p>Fractional vegetation cover (f_c) map of the sorghum field derived from UAS imagery acquired on 10 June 2016.</p

Regression models developed between vegetation indices and leaf area index (LAI) for the training data set.

<p>Best fit functions, determination coefficients (R²), root mean square errors (RMSE) and mean absolute performance errors (MAPE) are presented for the four vegetation indices.</p

Regression models developed between vegetation indices and fractional vegetation cover (f_c) for the training data set.

<p>Best fit functions, determination coefficients (R²), root mean square errors (RMSE) and mean absolute performance errors (MAPE) are presented for the four vegetation indices.</p

Case_Study_4_weed_management_evaluation_Raw_Image_Data_1_of_10

Part 1 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10