Distribution of the Ponto-Caspian Amphipods in Turkish Fresh Waters: An Overview

To date, 13 amphipod species [Dikerogammarus haemobaphes(Eichwald, 1841); D. istanbulensis Özbek & Özkan, 2011; D. gruberi Mateus & Mateus, 1990; Echinogammarus ischnusStebbing, 1899; Pontogammarus robustoides (Sars, 1894); P. maeoticus(Sowinsky, 1894); P. aestuarius(Derzhavin, 1924); Obesogammarus turcarum Stock, 1974; Amathillina cristata Sars, 1894; Chelicorophium curvispinum Sars, 1895; C. maeoticum(Sowinsky, 1898); C. robustum Sars, 1895 and Orchestia cavimana Heller, 1865] were reported from Turkey as the representatives of Ponto-Caspian amphipod fauna. Previous records and current distributional patterns of Ponto-Caspian amphipod crustaceans in Turkish inland waters were investigated. Three new localities were revealed as one of the southernmost points in distributional area of Pontogammarus robustoides (Sars, 1894)

Detection of human cytomegalovirus and Epstein-Barr virus in symptomatic and asymptomatic apical periodontitis lesions by real-time PCR

Objectives: Recent studies have investigated the occurrence of human cytomegalovirus and Epstein-Barr Virus in samples from apical periodontitis lesions and a role in the pathogenesis of this disease has been suggested. Because genotype distribution and seroprevalence of EBV and HCMV differ among populations, it is important to determine the presence of these viruses in endodontic periapical lesions of different populations. The aims of this study were to determine the presence of HCMV and EBV DNAs in samples from Turkish patients with symptomatic and asymptomatic apical periodontitis lesions using real-time polymerase chain reaction method and to evaluate their presence in both symptomatic and asymptomatic apical periodontitis lesions. Study Design: Periapical samples were collected from 12 asymptomatic and 16 symptomatic periapical lesions in conjunction with apicectomy. HCMV and EBV DNAs were identified in the samples by real-time PCR. The chi- squared test with Yates's correction or the Fisher's exact test was used to analyse the significance of differences. Results: HCMV DNA was detected in 10 of the 16 (62.5%) symptomatic and in five of the 12 (41.7 %) asymptomatic periapical study lesions. The EBV DNA was identified in seven of the 16 (43.7 %) symptomatic and three of the 12 (25 %) asymptomatic periapical lesions. The difference in occurrence of HCMV and EBV DNA between symptomatic and asymptomatic periapical lesions was not statistically significant. (All comparisons have p > 0.05). Conclusions: Our findings suggest that HCMV and EBV is a frequent inhabitant of both symptomatic and asymptomatic apical periodontitis lesions of endodontic origin in Turkish population

Analysis of Enterococcus faecalis in samples from Turkish patients with primary endodontic infections and failed endodontic treatment by real-time PCR SYBR green method

OBJECTIVE: The aims of this study were to investigate the presence of Enterococcus faecalis in primary endodontic infections and failed endodontic treatments using real-time PCR and to determine the statistical importance of the presence of E. faecalis in a Turkish population with endodontic infections. MATERIAL AND METHODS: E. faecalis was investigated from 79 microbial samples collected from patients who were treated at the Endodontic Clinic of the Dental School of Atatürk University (Erzurum, Turkey). Microbial samples were taken from 43 patients (Group 1) with failed endodontic treatments and 36 patients (Group 2) with chronic apical periodontitis (primary endodontic infections). DNA was extracted from the samples by using a QIAamp® DNA mini-kit and analyzed with real-time PCR SYBR Green. RESULTS: E. faecalis was detected in 41 out of 79 patients, suggesting that it exists in not less than 61% of all endodontic infections when the proportion test (z= -1.645

Minimal residual disease (MRD) detection with translocations and T-cell receptor and immunoglobulin gene rearrangements in adult acute lymphoblastic leukemia patients: a pilot study

Objective: Monitoring minimal residual disease has become increasingly important in clinical practice of ALL management. Break-point fusion regions of leukaemia related chromosomal aberrations and rearranged immunoglobulin (Ig) and T cell-receptor (TCR) genes are used as leukaemia specific markers in genetic studies of MRD.Material and Methods: A total of 31 consecutive patients with newly diagnosed ALL were screened for eligibility criteria. Of those 26 were included in the study. One patient with partial response following induction therapy and four patients who were lost to follow-up after induction were excluded from the study; thus 21 patients were evaluated for MRD by using polymerase chain reaction (PCR), heteroduplex analysis, sequencing and quantitative real time PCR techniques. Results: Chromosomal aberrations were detected in 5 (24%) of the patients and were used for MRD monitoring. Three patients had t(9;22) translocation, the other 2 had t(4;11) and t(1;19). MRD-based risk stratification of the16 patients analysed for Ig/TCR rearrangements revealed 3 low-risk, 11 intermediate-risk and 2 high-risk patients.Conclusion: MRD monitoring is progressively getting to be a more important predictive factor in adult ALL patients. As reported by others confirmed by our limited data there is a good correlation between MRD status and clinical outcome in patients receiving chemotherapy. The pilot-study presented here is the first that systematically and consecutively performs a molecular MRD monitoring of ALL patients in Turkey

A Novel Bacterial 6-Phytase Improves Growth Performance, Tibia Mineralization and Precaecal Digestibility of Phosphorus in Broilers: Data from Four Independent Performance Trials

A series of four broiler performance studies were conducted in different facilities to investigate the efficacy of a novel bacterial 6-phytase added at 500 FTU/kg diet on growth performance, bone mineralization and precaecal digestibility of phosphorus (pcdP) in broilers fed diets deficient in available P (avP) and calcium (Ca). The experimental design was the same for all studies, with each having three treatments: positive control (PC) diet formulated to meet or exceed the requirements of birds, negative control (NC) diet similarly reduced by 0.15% points in avP and Ca compared to the PC diet, and the NC diet supplemented with phytase (PHY) at 500 FTU/kg diet from 1 to 35 days of age. Body weight (BW) and feed intake were measured at 21 and 35 days of age, and average daily gain (ADG), average daily feed intake (ADFI), feed conversion ratio (FCR), BW gain-corrected-FCR (cFCR), mortality and European performance efficiency factor (EPEF) were calculated. Tibia dry matter, tibia ash content and pcd of P were measured at 21 days of age in all experiments. The analysis of the data from the four experiments showed that compared with birds fed the adequate-nutrient diet, birds fed the NC diet resulted in a decrease (p < 0.05) in BW, ADG, ADFI and EPEF by 6.4, 6.3, 5.9 and 7.1%, respectively, and an increase in (p = 0.02) cFCR by 2.0%. The tibia dry matter and tibia ash content of these birds were also reduced (p < 0.001) by 3.8 and 4.0% points, respectively. PHY diets improved (p < 0.05) BW, ADG, ADFI, EPEF and cFCR by 8.0, 8.3, 7.3, 10.6 and 2.8%, respectively. Phytase addition at 500 FTU/kg diet also increased (p < 0.001) the tibia dry matter and tibia ash content by 3.5 and 4.2% points, respectively. The pcd of P was improved (p < 0.001) by 11.1 and 11.3% points, in comparison with NC and PC diets, respectively, when phytase was added. These performance parameters and tibia mineralization obtained with a diet supplemented with phytase were comparable to or better than the PC diet. The results demonstrated that avP and Ca could be lowered similarly by 0.15% points in broilers diets by using the new bacterial 6-phytase at 500 FTU/kg diet.info:eu-repo/semantics/publishedVersio