Soil abandonment as a trigger for changes in Zn fractionation in afforested former vineyard acidic soils

Zinc is an essential element for plant nutrition, but it may cause toxicity depending on its bioavailability and potential transformation in soil. In vineyard soils, high concentrations of Zn are usually found, mainly due to agricultural practices. However, a great abandonment of vineyards has recently occurred, leading to changes in the total and bioavailable Zn concentrations, as well as Zn fractionation. We analyzed Zn concentrations (total, ZnT, and bioavailable, ZnED) and fractionation in the soil of three paired sites (PM, PT, and AR) up to depths of 50 cm in active and adjacent abandoned vineyards that were already transformed into forests. The ZnT averaged at 210 mg kg−1 among all studied vineyards. The results showed changes in the vertical pattern ZnT concentrations after vineyard abandonment at the PM and PT sites, while at the AR site, no great variation occurred. The ZnED (mean values = 7 mg kg−1) decreased after abandonment at PM and AR in the uppermost surface layers, while it increased in the top 10 cm at the PT site, reaching up to 60 mg kg−1. Regarding Zn fractionation in active vineyards, the residual fraction (ZnR) was the most abundant, followed by Zn bound to crystalline Fe and Al oxy-hydroxides (ZnC) and Zn bound to soil organic matter (ZnOM). After abandonment, the ZnR slightly increased and the ZnC slightly decreased at the PM and AR sites at all depths, while the ZnOM showed a noticeable variation in the uppermost 10 cm of the PT site. These results suggest that the soil organic matter that is provided during afforestation may play an important role in Zn fractionation and mobilization, depending on its humification degree and chemical stability. Zn mobilization could result in a positive nutrient supply for plants, but caution must be taken, since an excess of Zn could cause toxicity in long-term abandoned vineyards.Xunta de Galicia | Ref. ED431C2021/46-GRCAgencia Estatal de Investigación | Ref. JC2020-044426-IUniversidade de Vig

Changes in Cu accumulation and fractionation along soil depth in acid soils of vineyards and abandoned vineyards (now forests)

Financiado para publicación en acceso aberto: Universidade de Vigo/CISUGThis study investigated changes in copper accumulation and fractionation based on the depth of soils obtained from active and abandoned vineyards. Soil samples were collected at different depths in three areas with active and abandoned vineyards, and the concentrations of total copper and copper fractions were measured in these soil samples. Results revealed that in active vineyards, total copper accumulation was the highest in the first layer of soil (depth = 0–2 cm), with concentrations (193–892 mg kg−1) considerably higher than those in the deepest soil layer (depth = 40–50 cm; concentration = 63–71 mg kg−1). This accumulation was significantly correlated with the total carbon concentration in the soil. However, the total copper concentration in abandoned vineyards (84–374 mg kg−1) was the highest in the subsurface layers (depth = 10–15 cm) and was not significantly correlated with the total carbon content. Moreover, the percentage of available copper was lower in abandoned vineyards than in active vineyards. In terms of copper fractionation, the main fraction in active vineyard soil was copper bound to organic matter, whereas the main fraction in abandoned vineyard soil was residual copper. Therefore, vineyard abandonment and its transformation into forest changed the distribution and fractionation of copper based on soil depth, thus decreasing the amount of available copper and improving the soil quality, which could enable new ecosystems.Xunta de Galicia | Ref. ED431F 2018/06Ministerio de Economía | Ref. RYC-2016–20411Xunta de Galicia | Ref. ED481D-2021/01

Distribuição do mercúrio total em função da dimensão dos agregados num podzol de floresta temperada

This study determined the distribution of total Hg (HgT) among aggregate size fractions in the A, E, Bh and Bs horizons of a representative temperate forest podzol. The aggregate distribution was dominated by the coarse sand size fraction (average of 55%) followed by fine sand (29%), fine silt (10%), coarse silt (4%) and clay (2%). In general, HgT mean values increased as the aggregate size become smaller: clay (170 ng g-1) > fine silt (130 ng g-1) > coarse silt (80 ng g-1) > fine sand (32 ng g-1) > coarse sand (14 ng g-1). Total Hg enrichment in clay-sized aggregates ranged from 2 to 11 times higher than the values shown by the bulk soil ( 50% of HgT in Bh and Bs horizons. The potential ecological risk index (PERIHg) increased as the aggregate size decreased, with the highest values in the illuvial horizons (45-903) and lowest in the E horizon (3-363). Heterogeneous distribution of Hg in the soil aggregate size fractions must be considered for Hg determination for purposes such as critical loads, background values or environmental risk indices. In addition, Hg accumulation in finer aggregates could be of concern due to its potential mobility in forest soils, either transferred by leaching to groundwater and freshwaters or mobilized by runoff in surface horizons.En este trabajo se analiza la distribución de Hg total (HgT) en fracciones de tamaño agregado en los horizontes A, E, Bh y Bs de un podzol forestal representativo. La distribución de agregados fue dominada por la fracción de tamaño arena gruesa (promedio del 55%), seguida arena fina (29%), limo fino (10%), limo grueso (4%) y arcilla (2%). En general, los valores medios de HgT incrementaron a medida que el tamaño de los agregados disminuía: arcilla (170 ng g-1) > limo fino (130 ng g-1) > limo grueso (80 ng g-1) > arena fina (32 ng g-1) > arena gruesa (14 ng g-1). El enriquecimiento de HgT en los agregados de tamaño arcilla varía entre 2 y 11 veces más que los niveles en la fracción tierra fina (< 2 mm). La acumulación de HgT en los agregados de menor tamaño estaba estrechamente asociada al C orgánico total, al C extraído con pirofosfato Na, a los complejos metal (Al, Fe)-humus y a los oxihidróxidos de Fe y Al. De hecho, estos parámetros variaron significativamente (p < 0,05) con el tamaño de agregado y sus valores más elevados se encontraron en las fracciones más finas. Esto sugiere el papel de estos compuestos del suelo en el incremento de la superficie específica por unidad de masa y de cargas negativas en los agregados más pequeños, favoreciendo la retención de Hg. Los valores del factor de acumulación de Hg (HgAF) fueron de hasta 10,8 en los agregados de tamaño arcilla, siendo cercanos a 1 en las fracciones de tamaño arena. Respecto de los factores de enriquecimiento de Hg (HgEF), estos fueron < 4 (categoría “contaminación moderada”) en la mayoría de los horizontes y tamaños de agregado. El índice de masa por tamaño de agregado (GSFHg) reveló que las fracciones más finas tenían una mayor carga de Hg que el correspondiente a sus masas, siendo destacable la contribución del limo fino que constituía más del 50% del HgT en los horizontes Bh y Bs. El índice de riesgo ecológico potencial (PERIHg) aumentó conforme disminuía el tamaño de agregado, con los valores más altos en los horizontes iluviales (45-903) y los más bajos en el horizonte E (3-363). La distribución heterogénea del Hg entre fracciones de tamaño agregado debe ser tenida en cuenta para la determinación de Hg para fines como cargas críticas, valores de fondo geoquímico o índices de riesgos medioambientales. Además, la acumulación de Hg en los agregados más finos podría ser preocupante debido a su potencial movilidad en suelos forestales, tanto mediante su transferencia por lixiviado a aguas freáticas y superficiales como su movilización por escorrentía en los horizontes superficiales.Neste estudo determinou-se a distribuição do Hg total (HgT) pelos agregado de diferentes frações nos horizontes A, E, Bh e Bs de um podzol representativo de floresta temperada. A distribuição dos agregados foi dominada pela fração areia grossa (média de 55%) seguida de areia fina (29%), limo fino (10%), limo grosseiro (4%) e argila (2%). Em geral, os valores médios da HgT aumentaram à medida que a dimensão do agregado diminuiu: argila (170 ng g-1) > limo fino (130 ng g-1) > limo grosseiro (80 ng g-1) > areia fina (32 ng g-1) > areia grosseira (14 ng g-1). O enriquecimento total de Hg em agregados da dimensão argila variou, sendo de 2 a 11 vezes maior do que os valores na fração terra fina (< 2 mm). A acumulação de HgT em agregados de menor dimensão estava intimamente relacionada com o C orgânico total, C extraído com pirofosfato de Na, aos complexos organo-metálicos (Al, Fe) e aos oxihidróxidos de Fe e Al. De facto, esses parâmetros variaram significativamente (p < 0,05) com o tamanho do agregado e os valores mais altos ocorreram nas frações mais finas. Isto sugere o papel destes compostos do solo no aumento da superfície específica e das cargas negativas nos agregados de menor dimensão, favorecendo a retenção do Hg. Os valores do fator de acumulação de Hg (HgAF) atingiram o valor de 10,8 nos agregados da dimensão argila, sendo próximos da unidade nas frações areia. Os fatores de enriquecimento do Hg (HgEF) apresentam valores < 4 (categoria "poluição moderada") na maioria dos horizontes e dimensão de agregados. O índice de massa por dimensão de agregado (GSFHg) revelou que as frações mais finas apresentam maior carga de Hg do que as suas frações de massa, sendo notável a contribuição do limo fino ao qual correspondiam valores > 50% de HgT nos horizontes Bh e Bs. O índice de risco ecológico potencial (PERIHg) aumentou com a diminuição do tamanho do agregado, com os valores mais altos nos horizontes iluviais (45-903) e mais baixos no horizonte E (3-363). A distribuição heterogénea de Hg nos agregados de várias dimensões deve ser considerada para determinação do Hg no solo com objetivos tais como cargas críticas, valores de fundo ou índices de risco ambiental. Além disso, a acumulação de Hg em agregados mais finos pode ser motivo de preocupação devido à sua potencial mobilidade em solos florestais, quer pela sua transferência por lixiviação para as águas subterrâneas e superficiais, quer por mobilização por escoamento superficial desorganizado em horizontes superficiais.This work was supported by the Consellería de Cultura, Educación e Ordenación Universitaria (Xunta de Galicia) with a Reference Competitive Groups grant (ED431C2017/62) to BV1 Research Group. Xunta de Galicia is acknowledged by the pre-doctoral fellowship of A. G. A. (ED481A-2016/220)S

Combination of mechanism-based and data-based models for the prediction of quality in fresh fish

[Resumen] El desperdicio alimentario supone un gran problema de sostenibilidad. El pescado, en concreto, es un producto especialmente perecedero, degradándose con mucha rapidez cuando la temperatura de almacenamiento no se controla adecuadamente. Los modelos matemáticos son herramientas útiles para predecir la evolución de la calidad del pescado durante el transporte y almacenamiento. Conocer la dinámica de la degradación con antelación también nos permitirá definir estrategias para reducir el desperdicio alimentario y aumentar el valor añadido del pescado. En este trabajo se presenta una nueva metodología para la descripción de la evolución de calidad de filetes de merluza (Merluccius merluccius) envasada en atmósferas modificadas durante el transporte y almacenamiento. Dicha metodología consta de dos partes: un modelo basado en los mecanismos del proceso que describe la evolución de dos de los indicadores de calidad más utilizados (contenido bacteriano y bases volátiles), y un modelo de aprendizaje automático que permite correlacionar dichos indicadores con un indicador sensorial, el QIM (del inglés, Quality Index Method). Para la evolución de las bases volátiles se propone un nuevo modelo basado en la ley de potencias. Además, en este trabajo, los parámetros desconocidos del modelo se estiman utilizando datos experimentales. En el caso de los modelos de aprendizaje automático, se comparan técnicas de redes neuronales y árboles de decisión utilizando diferentes indicadores del error. El modelo combinado supone un avance en la predicción de calidad, ya que permite predecir el QIM a partir, exclusivamente, de datos de temperatura y obtener resultados satisfactorios.[Abstract] Food waste is a significant sustainability problem. Fish, in particular, is a very perishable product. In fact, spoilage increases rapidly when the storage temperature is not adequately controlled. Mathematical models are useful tools to predict fish quality evolution during transport and storage. This knowledge will help to develop strategies to reduce food waste and to increase the product value. In this work, we propose a new methodology to predict the evolution of quality, during transport and storage, of hake fillets packed in modified atmospheres. It consists of two parts: a model based on the process mechanisms to describe the evolution of two highly used quality indicators (bacterial content and volatile bases), and a machine learning model to correlate such indicators with one of the most employed sensory indexes: the Quality Index Method (QIM). Moreover, we propose a Power Law model to describe volatile bases evolution. We estimate the unknown parameters using experimental data. In the machine learning part, we compare random forest models and neural networks using several statistical techniques. Overall, this methodology is an improvement in fish quality prediction because it makes QIM prediction using just temperature data with promising results.Ministerio de Agricultura, Pesca y Alimentación; 202178002Ministerio de Ciencia e Innovación; PRTRC17.I

Variation of Hg concentration and accumulation in the soil of maritime pine plantations along a coast-inland transect in SW Europe

Financiado para publicación en acceso aberto: Universidade de Vigo/CISUGClimatic conditions have been shown as a major driver of the fate of Hg in forest ecosystems at a global scale, but less is known about climatic effects at shorter scales. This study assesses whether the concentration and pools of Hg in soils collected from seventeen Pinus pinaster stands describing a coastal-inland transect in SW Europe vary along a regional climatic gradient. In each stand, samples of the organic subhorizons (OL, OF + OH) and the mineral soil (up to 40 cm) were collected and some general physico-chemical properties and total Hg (THg) were analyzed. Total Hg was significantly higher in the OF + OH than in the OL subhorizons (98 and 38 μg kg−1, respectively), favored by a greater organic matter humification in the former. In the mineral soil, mean THg values decreased with depth, ranging from 96 μg kg−1 in the 0–5 cm layers to 54 μg kg−1 in the deepest layers (30–40 cm), respectively. The average Hg pool (PHg) was 0.30 mg m−2 in the organic horizons (92% accumulated in the OF + OH subhorizons), and 27.4 mg m−2 in the mineral soil. Changes in climatic factors, mainly precipitation, along the coast-inland transect resulted in a remarkable variation of THg in the OL subhorizons, consistent with their role as the first receiver of atmospheric Hg inputs. The high precipitation rate and the occurrence of fogs in coastal areas characterized by the oceanic influence would explain the higher THg found in the uppermost soil layers of pine stands located close to the coastline. The regional climate is key to the fate of mercury in forest ecosystems by influencing the plant growth and subsequent atmospheric Hg uptake, the atmospheric Hg transference to the soil surface (wet and dry deposition and litterfall) and the dynamics that determine net Hg accumulation in the forest floor.Ministerio de Educación y Formación Profesional | Ref. FPU17/05484Ministerio de Ciencia e Innovación | Ref. PID 2021-125114OB-I00Consellería de Cultura, Educación e Universidade (Xunta de Galicia) | Ref. ED431C2021/46- GRCUniversidad de Vigo/CISU

Needle age and precipitation as drivers of Hg accumulation and deposition in coniferous forests from a southwestern European Atlantic region

Financiado para publicación en acceso aberto: Universidade de Vigo/CISUGVegetation and climate are critical in the biogeochemical cycle of Hg in forest ecosystems. The study assesses the influence of needle age and precipitation on the accumulation of Hg in needle biomass and its deposition by litterfall in thirty-one pine plantations spread throughout two biogeographical regions in SW Europe. Welldeveloped branches of Pinus pinaster were sampled and pine needles were classified according to 4 age classes (y0, y1, y2, y3). The concentration of total Hg (THg) was analyzed in the samples and Hg content in needle biomass and its deposition by litterfall were estimated. The concentration of total Hg (THg) increased with needle age ranging from 9.1 to 32.7 μg Hg kg−1 in the youngest and oldest needles, respectively. The rate of Hg uptake (HgR) three years after needle sprouting was 10.2 ± 2.3 μg Hg kg−1 yr−1, but it decreased with needle age probably due to a diminution in photosynthetic activity as needles get older. The average total Hg stored in needle biomass (HgWt) ranged from 5.6 to 87.8 mg Hg ha−1, with intermediate needle age classes (y1 and y2) accounting for 70% of the total Hg stored in the whole needle biomass. The average deposition flux of Hg through needle litterfall (HgLt) was 1.5 μg Hg m−2 yr−1, with the y2 and y3 needles contributing most to the total Hg flux. The spatial variation of THg, HgWt and HgLt decreased from coastal pine stands, characterized by an oceanic climate, to inland pine stands, a feature closely related to the dominant precipitation regime in the study area. Climatic conditions and needle age are the main factors affecting Hg accumulation in tree foliage, and should be considered for an accurate assessment of forest Hg pools at a regional scale and their potential consequences in the functioning of terrestrial ecosystems.Ministerio de Educación y Formación Profesional | Ref. FPU17/05484Xunta de Galicia | Ref. ED431C 2021/46-GRCXunta de Galicia | Ref. ED431F2018/06-EXCELENCIAXunta de Galicia | Ref. ED431C2018/0

Mercury in a birch forest in SW Europe: Deposition flux by litterfall and pools in aboveground tree biomass and soils

Financiado para publicación en acceso aberto: Universidade de Vigo/CISUGAtmospheric mercury (Hg) is largely assimilated by vegetation and subsequently transferred to the soil by litterfall, which highlights the role of forests as one of the largest global Hg sinks within terrestrial ecosystems. We assessed the pool of Hg in the aboveground biomass (leaves, wood, bark, branches and twigs), the Hg deposition flux through litterfall over two years (by sorting fallen biomass in leaves, twigs, reproductive structures and miscellaneous) and its accumulation in the soil profile in a deciduous forest dominated by Betula alba from SW Europe. The total Hg pool in the aboveground birch biomass was in the range 532–683 mg ha−1, showing the following distribution by plant tissues: well-developed leaves (171 mg ha−1) > twigs (160 mg ha−1) > bark (159 mg ha−1) > bole wood (145 mg ha−1) > fine branches (25 mg ha−1) > thick branches (24 mg ha−1) > newly sprouted leaves (20 mg ha−1). The total Hg deposition fluxes through litterfall were 15.4 and 11.7 μg m−2 yr−1 for the two years studied, with the greatest contribution coming from birch leaves (73 %). In the soil profile, the pool of Hg in the mineral soil (37.0 mg m−2) was an order of magnitude higher than in the organic horizons (1.0 mg m−2), mostly conditioned by parameters such as soil bulk density and thickness, total C andNcontents and the presence of certain Al compounds.Ministerio de Educación y Formación Profesional | Ref. FPU17/05484Xunta de Galicia | Ref. ED431C2021/46-GRCXunta de Galicia | Ref. ED431F2018/06- EXCELENCI

Correção de um solo de mina com subprodutos: efeito sobre a biomassa microbiana determinada através da utilização de ácidos gordos dos fosfolípidos

In the present work, the effect of two by-products (pine bark and crushed mussel shell) on microbial biomass and community structure was studied in a soil from a mine tailing located in a copper mine. In a laboratory experiment, different doses (0, 12, 24, 48, 96 and 192 Mg ha-1) of pine bark, crushed mussel shell or mixtures of both by-products were added to the soil. The amended soil samples were incubated for one year at 60% of water holding capacity, and then 33 phospholipid fatty acids (PLFAs) were extracted from these samples and quantified. The PLFAs concentrations were used for different microbial biomass estimations: total biomass, bacterial biomass, fungal biomass, gram-positive (G+) biomass and gram-negative (G-) biomass. The addition of crushed mussel had no significant effects on the total soil microbial biomass, either bacterial of fungal biomass. However, the addition of pine bark increased the total microbial biomass in the soil (up to 40%), mainly due to increases in the fungal biomass (it increased 1600%). No synergistic effects were observed when the soil was amended with both, pine bark and crushed mussel shell. The main community structure changes were due to the addition of pine bark to the soil, and were also due to modifications in fungal communities. Our results suggest that the microbial biomass was mainly limited in the mine soil by low organic matter concentrations, and therefore, practices increasing the amount of soil organic matter should be priorities for soil reclamation.En el presente trabajo se estudió el efecto de dos subproductos (corteza de pino y concha de mejillón triturada) sobre la biomasa y estructura microbiana de un suelo procedente de una escombrera localizada en una mina de cobre. En un experimento realizado en laboratorio fueron añadidas al suelo diferentes dosis (0, 12, 24, 48, 96 and 192 Mg ha-1) de corteza de pino, concha de mejillón triturada y mezclas de ambos subproductos. Las muestras de suelo enmendado fueron incubadas durante un año al 60% de la capacidad de campo, y posteriormente 33 ácidos grasos de los fosfolípidos (PLFAs) fueron extraídos de estas muestras y cuantificados. La concentración de PLFAs fue utilizada para realizar distintas estimaciones de la biomasa microbiana: biomasa total, biomasa bacteriana, biomasa fúngica, biomasa de bacterias gram + y biomasa de bacterias gram -. La adición de concha de mejillón triturada no tuvo efectos significativos sobre la biomasa total ni sobre la biomasa bacteriana o fúngica. Sin embargo, la adición de corteza de pino al suelo incrementó la biomasa total del suelo (hasta un 40%), debido mayormente al incremento de la biomasa fúngica (se incrementó un 1600%). Tampoco se observaron efectos sinérgicos cuando el suelo fue enmendado con una mezcla de corteza de pino y concha de mejillón triturada. Los mayores cambios en la estructura de las comunidades microbianas fueron debidos a la adición de corteza de pino al suelo, y fueron además debidas a cambios en las comunidades fúngicas. Nuestros resultados sugieren que la biomasa microbiana del suelo de mina está mayormente limitada por la concentración de materia orgánica y, por tanto, deben ser priorizadas prácticas de manejo que contribuyan a incrementarla para la rehabilitación de este tipo de suelos.Neste trabalho foi estudado o efeito de dois subprodutos (casca de pinheiro e concha de mexilhão triturada) na biomassa e estrutura microbiana de um solo procedente de uma escombreira localizada numa mina de cobre. Numa experiência de laboratório, doses diferentes (0, 12, 24, 48, 96 e 192 Mg ha-1) de casca de pinheiro, concha de mexilhão triturada e misturas de ambos os subprodutos foram adicionados ao solo. Amostras de solo corrigido com os resíduos foram incubadas durante um ano a 60% da sua capacidade de retenção de água, e subsequentemente, 33 ácidos gordos dos fosfolípidos (PLFAs) foram extraídos a partir destas amostras e quantificados. A concentração de PLFAs foi usada para estimar vários tipos de biomassa microbiana: biomassa total, biomassa bacteriana, biomassa fúngica, biomassa de bactérias gram positivas e biomassa de bactérias gram negativas. A adição de concha de mexilhão triturada não teve nenhum efeito significativo na biomassa total ou na biomassa bacteriana ou fúngica. Porém, a adição de casca de pinheiro aumentou a biomassa microbiana do solo (até 40%), principalmente devido ao aumento da biomassa fúngica (a qual aumentou de 1600%). Não foi observado nenhum efeito de sinergismo quando o solo foi corrigido com uma mistura de casca de pinheiro e concha de mexilhão triturada. As maiores alterações na estrutura das comunidades microbianas foram produzidas pela adição de casca de pinheiro ao solo, as quais resultaram em alterações nas comunidades fúngicas. Os resultados sugerem que a biomassa microbiana do solo de mina é, maioritariamente limitada pela concentração de matéria orgânica. Assim, práticas que contribuam para o seu aumento devem ser prioritárias para a reabilitação deste tipo de solos.S

Clonal chromosomal mosaicism and loss of chromosome Y in elderly men increase vulnerability for SARS-CoV-2

The pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2, COVID-19) had an estimated overall case fatality ratio of 1.38% (pre-vaccination), being 53% higher in males and increasing exponentially with age. Among 9578 individuals diagnosed with COVID-19 in the SCOURGE study, we found 133 cases (1.42%) with detectable clonal mosaicism for chromosome alterations (mCA) and 226 males (5.08%) with acquired loss of chromosome Y (LOY). Individuals with clonal mosaic events (mCA and/or LOY) showed a 54% increase in the risk of COVID-19 lethality. LOY is associated with transcriptomic biomarkers of immune dysfunction, pro-coagulation activity and cardiovascular risk. Interferon-induced genes involved in the initial immune response to SARS-CoV-2 are also down-regulated in LOY. Thus, mCA and LOY underlie at least part of the sex-biased severity and mortality of COVID-19 in aging patients. Given its potential therapeutic and prognostic relevance, evaluation of clonal mosaicism should be implemented as biomarker of COVID-19 severity in elderly people. Among 9578 individuals diagnosed with COVID-19 in the SCOURGE study, individuals with clonal mosaic events (clonal mosaicism for chromosome alterations and/or loss of chromosome Y) showed an increased risk of COVID-19 lethality