Winter residency and site association in the critically endangered North East Atlantic spurdog (Squalus acanthias)

Identification and incorporation of residential behaviour into elasmobranch management plans has the potential to substantially increase their effectiveness by identifying sites where Marine Protected Areas (MPAs) might be used to help conserve species with high migratory potential. There is evidence that spurdog (Squalus acanthias) displays site association in some parts of its global distribution, but this has currently not been shown within the North East Atlantic where it is critically endangered. Here we investigate the movements of electronically tagged spurdog within Loch Etive, a sea loch on the west coast of Scotland. Archival data storage tags (DSTs), that recorded depth and temperature, revealed that mature female spurdog over wintered within the loch, restricting their movements to the upper basin, and remaining either in the loch or the local vicinity for the rest of the year. This finding was supported by evidence for limited movements from conventional mark/recapture data and acoustically tagged individual spurdog. Some of the movements between the loch basins appear to be associated with breeding and parturition events. This high level of site association suggests that spatial protection of the loch would aid the conservation of different age and sex classes of spurdog

Report of the ICES\NAFO Joint Working Group on Deep-water Ecology (WGDEC), 11–15 March 2013, Floedevigen, Norway.

On 11 February 2013, the joint ICES/NAFO WGDEC, chaired by Francis Neat (UK) and attended by ten members met at the Institute for Marine Research in Floedevi-gen, Norway to consider the terms of reference (ToR) listed in Section 2. WGDEC was requested to update all records of deep-water vulnerable marine eco-systems (VMEs) in the North Atlantic. New data from a range of sources including multibeam echosounder surveys, fisheries surveys, habitat modelling and seabed imagery surveys was provided. For several areas across the North Atlantic, WGDEC makes recommendations for areas to be closed to bottom fisheries for the purposes of conservation of VMEs

Fe(III) (oxyhydr)oxide reduction by the thermophilic iron-reducing bacterium Desulfovulcanus ferrireducens

Some thermophilic bacteria from deep-sea hydrothermal vents grow by dissimilatory iron reduction, but our understanding of their biogenic mineral transformations is nascent. Mineral transformations catalyzed by the thermophilic iron-reducing bacterium Desulfovulcanus ferrireducens during growth at 55°C were examined using synthetic nanophase ferrihydrite, akaganeite, and lepidocrocite separately as terminal electron acceptors. Spectral analyses using visible-near infrared (VNIR), Fourier-transform infrared attenuated total reflectance (FTIR-ATR), and Mössbauer spectroscopies were complemented with x-ray diffraction (XRD) and transmission electron microscopy (TEM) using selected area electron diffraction (SAED) and energy dispersive X-ray (EDX) analyses. The most extensive biogenic mineral transformation occurred with ferrihydrite, which produced a magnetic, visibly dark mineral with spectral features matching cation-deficient magnetite. Desulfovulcanus ferrireducens also grew on akaganeite and lepidocrocite and produced non-magnetic, visibly dark minerals that were poorly soluble in the oxalate solution. Bioreduced mineral products from akaganeite and lepidocrocite reduction were almost entirely absorbed in the VNIR spectroscopy in contrast to both parent minerals and the abiotic controls. However, FTIR-ATR and Mössbauer spectra and XRD analyses of both biogenic minerals were almost identical to the parent and control minerals. The TEM of these biogenic minerals showed the presence of poorly crystalline iron nanospheres (50–200 nm in diameter) of unknown mineralogy that were likely coating the larger parent minerals and were absent from the controls. The study demonstrated that thermophilic bacteria transform different types of Fe(III) (oxyhydr)oxide minerals for growth with varying mineral products. These mineral products are likely formed through dissolution-reprecipitation reactions but are not easily predictable through chemical equilibrium reactions alone

Connectivity in the Deep: Phylogeography of the Velvet Belly Lanternshark

PublishedThe velvet belly lanternshark, Etmopterus spinax, is a deep-sea bioluminescent squaloid shark, found predominantly in the northeast Atlantic and Mediterranean Sea. It has been exposed to relatively high levels of mortality associated with by-catch in some regions. Its late maturity and low fecundity potentially renders it vulnerable to over-exploitation, although little remains known about processes of connectivity between key habitats/regions. This study utilised DNA sequencing of partial regions of the mitochondrial control region and nuclear ribosomal internal transcribed spacer 2 to investigate population structure and phylogeography of this species across the northeast Atlantic and Mediterranean Basin. Despite the inclusion of samples from the range edges or remote locations, no evidence of significant population structure was detected. An important exception was identified using the control region sequence, with much greater (and statistically significant) levels of genetic differentiation between the Mediterranean and Atlantic. This suggests that the Strait of Gibraltar may represent an important bathymetric barrier, separating regions with very low levels of female dispersal. Bayesian estimation of divergence time also places the separation between the Mediterranean and Atlantic lineages within the last 100,000 years, presumably connected with perturbations during the last Glacial Period. These results demonstrate population subdivision at a much smaller geographic distance than has generally been identified in previous work on deep-sea sharks. This highlights a very significant role for shallow bathymetry in promoting genetic differentiation in deepwater taxa. It acts as an important exception to a general paradigm of marine species being connected by high levels of gene-flow, representing single stocks over large scales. It may also have significant implications for the fisheries management of this species.We would like to thank Trude Thangstad, Merete Kvalsund (Institute of Marine Research, Norway), Cecilia Pinto, Eleonora de Sabata and the scientists and crew of the RV Celtic Explorer for assistance in the collection of samples. Funding for this project was provided by the University of Salford and the University of Bristol. We are grateful to all those who helped with sample collection, including the MEDITS survey programme, the Department of Fisheries and Marine Research (DFMR) of Cyprus, the Annual Demersal and Deep Water Fish Monitoring Surveys financed by the Azores Government and the CONDOR project (supported by a grant from Iceland, Liechtenstein, Norway through the EEA Financial Mechanism (PT0040/2008)

Squalus acanthias, spiny dogfish

While there are reported subpopulations of Squalus acanthias (Linnaeus, 1758) elsewhere in the world, the North Pacific subpopulation is now considered a separate species, Squalus suckleyi (Girard, 1854) (see Ebert et al. 2010). Further taxonomic studies on this genus are required, including in relation to Mediterranean and Black Sea subpopulations. In Europe, three subpopulations are inferred to occur.Fil: Finucci, B.. National Institute of Water and Atmospheric Research; Nueva ZelandaFil: Cheok, J.. University Fraser Simon; CanadáFil: Chiaramonte, Gustavo Enrique. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia". Estación Hidrobiológica de Puerto Quequén (sede Quequén); ArgentinaFil: Cotton, C. F.. Florida State University; Estados UnidosFil: Dulvy, N. K.. University Fraser Simon; CanadáFil: Kulka, D. W.. No especifíca; ArgentinaFil: Neat, F. C.. No especifíca; ArgentinaFil: Pacoureau, N.. University Fraser Simon; CanadáFil: Rigby, C. L.. James Cook University; AustraliaFil: Tanaka, S.. No especifíca; ArgentinaFil: Walker, T. I.. University of Melbourne; Australi

A future for seafood point-of-origin testing using DNA and stable isotope signatures

Demand for seafood products is increasing worldwide, contributing to ever more complex supply chains and posing challenges to trace their origin and guarantee legal, well-managed, sustainable sources from confirmed locations. While DNA-based methods have proven to be reliable in verifying seafood authenticity at the species level, the verification of geographic origin remains inherently more complex. Both genetic and stable isotope analyses have been employed for determining point-of-origin with varying degrees of success, highlighting that their application can be effective when the right tool is selected for a given application. Developing an a priori prediction of their discrimination power for different applications can help avoid the financial cost of developing inappropriate reference datasets. Here, we reviewed the application of both techniques to seafood point-of-origin for 63 commercial finfish species certified by the Marine Stewardship Council, and showed that, even for those species where baseline data exist, real applications are scarce. To fill these gaps, we synthesised current knowledge on biological and biogeochemical mechanisms that underpin spatial variations in genetic and isotopic signatures. We describe which species’ biological and distribution traits are most helpful in predicting effectiveness of each tool. Building on this, we applied a mechanistic approach to predicting the potential for successful validation of origin to three case study fisheries, using combined genetic and isotopic methodologies to distinguish individuals from certified versus non-certified regions. Beyond ecolabelling applications, the framework we describe could be reproduced by governments and industries to select the most cost-effective techniques

A future for seafood point-of-origin testing using DNA and stable isotope signatures

Demand for seafood products is increasing worldwide, contributing to ever more complex supply chains and posing challenges to trace their origin and guarantee legal, well-managed, sustainable sources from confirmed locations. While DNA-based methods have proven to be reliable in verifying seafood authenticity at the species level, the verification of geographic origin remains inherently more complex. Both genetic and stable isotope analyses have been employed for determining point-of-origin with varying degrees of success, highlighting that their application can be effective when the right tool is selected for a given application. Developing an a priori prediction of their discrimination power for different applications can help avoid the financial cost of developing inappropriate reference datasets. Here, we reviewed the application of both techniques to seafood point-of-origin for 63 commercial finfish species certified by the Marine Stewardship Council, and showed that, even for those species where baseline data exist, real applications are scarce. To fill these gaps, we synthesised current knowledge on biological and biogeochemical mechanisms that underpin spatial variations in genetic and isotopic signatures. We describe which species’ biological and distribution traits are most helpful in predicting effectiveness of each tool. Building on this, we applied a mechanistic approach to predicting the potential for successful validation of origin to three case study fisheries, using combined genetic and isotopic methodologies to distinguish individuals from certified versus non-certified regions. Beyond ecolabelling applications, the framework we describe could be reproduced by governments and industries to select the most cost-effective techniques. Graphic abstract: [Figure not available: see fulltext.

Population structure and connectivity in the genus Molva in the Northeast Atlantic

Peer reviewedIn fisheries, operational management units and biological data often do not coincide. In many cases, this is not even known due to the lack of information about a species’ population structure or behaviour. This study focuses on two such species, the common ling Molva molva and the blue ling M. dypterygia, two Northeast Atlantic gadoids with overlapping geographical distribution, but different depth habitats. Heavily exploited throughout their ranges, with declining catches, little is known about their population structure. Genotyping-by-sequencing at thousands of genetic markers indicated that both species are separated into two major groups, one represented by samples from the coasts of western Scotland, Greenland, and the Bay of Biscay and the other off the coast of Norway. This signal is stronger for the deeper dwelling blue ling, even though adult dispersal was also identified for this species. Despite small sample sizes, fine-scale patterns of genetic structure were identified along Norway for common ling. Signatures of adaptation in blue ling consisted in signs of selections in genes involved in vision, growth, and adaptation to cold temperatures.European Unio