Genetic by environment interaction on fresh root yield, dry matter content and total carotene concentration of yellow-fleshed cassava genotypes in five major cassava growing agroecological zones in Nigeria

Eighteen yellow-fleshed cassava genotypes and two released white-fleshed clones (check) were evaluated in five locations representing the major cassava growing agroecological zones of Nigeria to access their performance for fresh root yield, dry matter content, total carotene content and genotypes by environment interaction effects. The aim of the study was to identify stable cassava genotypes that combine high root yield, and high dry matter with high beta carotene content in storage root. The study was conducted in two cropping seasons (2008/2009 and 2009/2010) at Ikenne (humid forest), Ibadan (forest-savanna transition), Ubiaja (sub-humid forest), Mokwa (sub-humid southern-Guinea savanna) and Zaria (moist northern-Guinea savanna). At all locations, the trials were conducted in a randomised complete block design (RCBD) with four replications. The combined analysis of variance showed that fresh root yield (t ha-1), dry matter content (%) and total carotene content (μg g-1 fresh weight) was significantly affected (P < 0.001) by Genotype (G), Environment E, and G × E interaction. For fresh root yield, the best genotype was IITA TMS I050024 followed by IITA TMS I050998 and IITA TMS I050286. For dry matter content of the storage roots, the genotype IITA TMS 1051570 had the highest score followed by IITA TMS 1051740 and IITA IMS I050998. For total carotene content, the best genotypes across the 10 environments in decreasing order of carotene content were IITA TMS I051601, IITA TMS I050311, IITA TMS I050998 and IITA TMS I050099. When combining fresh root yield and dry matter content (dry yield), the genotypes IITA TMS I050998 and IITA TMS I051740 ranked highest. The Environment effect accounted for most of the variation of the total sum of squares (SS) for fresh root yield (55.0%), dry matter content (42.3%) and dry yield (57.9%). The genotype accounted for most of the SS for total carotene content (67.9%)

Emergent quantum Euler equation and Bose-Einstein condensates

In this paper, proceeding from the recently developed way of deriving the quantum-mechanical equations from the classical ones, the complete system of hydrodynamical equations, including the quantum Euler equation, is derived for a perfect fluid and an imperfect fluid with pairwise interaction between the particles. For the Bose-Einstein condensate of the latter one the Bogolyubov spectrum of elementary excitations is easily reproduced in the acoustic approximation.Comment: 10 page

Production of the first transgenic cassava in Africa via direct shoot organogenesis from friable embryogenic calli and germination of maturing somatic embryos

The impact of cassava transformation technologies for agricultural development in Africa will depend largely on how successfully these capabilities are transferred and adapted to the African environmentand local needs. Here we report on the first successful establishment of cassava regeneration and transformation capacity in Africa via organogenesis, somatic embryogenesis and friable embryogeniccallus (FEC). As a prerequisite for genetic engineering, we evaluated six African cassava genotypes for the ability of a) induction of FEC b) hygromycin sensitivity and c) T-DNA integration potential bydifferent Agrobacterium strains. FEC was induced in genotypes TMS 60444, TME 1 and TMS 91/02327. Potential tissues for FEC formation were induced in TMS 91/02324, TME 12 and TME 13. Pure andproliferating FEC was obtained and maintained only in TMS 60444. FEC growth and shoot organogenesis were completely suppressed when hygromycin was used at a concentration of 20 mg/l in all tissue types and genotypes. With somatic cotyledons, statistically significant differences (p0.05) were observed between Agrobacterium strains and genotypes with respect to T-DNA transfer efficiency.Using somatic cotyledons, TME 8 was found to be the most amenable to transformation with maximum blue spots per GUS-positive explants, and Agrobacterium GV3101 proved to be superior to EHA105,LBA4404, and AGl-1 for T-DNA transfer based on transient assays with a reporter gene (GUS). With FEC, Agrobacterium LBA4404 was superior to other strains. This study also identified EHA105 as a newvir helper strain to recover transgenic cassava plants. PCR and Southern hybridization of genomic DNA of the hygromycin-resistant cassava plants to a hpt probe confirmed the integration of hpt withintegration events varying between 1 and 2 insertions. The benefit of combining the FEC and shoot organogenesis systems for recovering transgenic cassava plants is described. The contributions ofthis report to enhancing the development and deployment of genetic engineering of cassava for agricultural biotechnology development in Africa are discussed

Theory of Multidimensional Solitons

We review a number of topics germane to higher-dimensional solitons in Bose-Einstein condensates. For dark solitons, we discuss dark band and planar solitons; ring dark solitons and spherical shell solitons; solitary waves in restricted geometries; vortex rings and rarefaction pulses; and multi-component Bose-Einstein condensates. For bright solitons, we discuss instability, stability, and metastability; bright soliton engineering, including pulsed atom lasers; solitons in a thermal bath; soliton-soliton interactions; and bright ring solitons and quantum vortices. A thorough reference list is included.Comment: review paper, to appear as Chapter 5a in "Emergent Nonlinear Phenomena in Bose-Einstein Condensates: Theory and Experiment," edited by P. G. Kevrekidis, D. J. Frantzeskakis, and R. Carretero-Gonzalez (Springer-Verlag

Bridging Time Scales in Cellular Decision Making with a Stochastic Bistable Switch

Cellular transformations which involve a significant phenotypical change of the cell's state use bistable biochemical switches as underlying decision systems. In this work, we aim at linking cellular decisions taking place on a time scale of years to decades with the biochemical dynamics in signal transduction and gene regulation, occuring on a time scale of minutes to hours. We show that a stochastic bistable switch forms a viable biochemical mechanism to implement decision processes on long time scales. As a case study, the mechanism is applied to model the initiation of follicle growth in mammalian ovaries, where the physiological time scale of follicle pool depletion is on the order of the organism's lifespan. We construct a simple mathematical model for this process based on experimental evidence for the involved genetic mechanisms. Despite the underlying stochasticity, the proposed mechanism turns out to yield reliable behavior in large populations of cells subject to the considered decision process. Our model explains how the physiological time constant may emerge from the intrinsic stochasticity of the underlying gene regulatory network. Apart from ovarian follicles, the proposed mechanism may also be of relevance for other physiological systems where cells take binary decisions over a long time scale.Comment: 14 pages, 4 figure

A thermally-driven seawater desalination system: Proof of concept and vision for future sustainability

Since the 1970s, commercial-scale thermally-driven seawater desalination plants have been powered by low-grade energy sources, drawn either with low-pressure bled-steam from steam turbines or the solar renewable energy harvested that are supplied at relatively low temperatures. Despite the increasing trend of seawater reverse osmosis plants, the role of thermal desalination methods (such as multi-stage flashing and multi-effect distillation) in GCC countries is still relevant in the Arabian Gulf, arising from higher salinity, the frequent algae blooms of seawater and their ability to utilize low temperature heat sources. Given the urgent need for lowering both the capital and operating costs of all processes within the desalination industry and better ther- modynamic adaptation of low-grade heat input from renewable sources, the present paper ad- dresses the abovementioned issues by investigating the direct contact spray evaporation and condensation (DCSEC) method. A DCSEC system comprises only hollow chambers (devoid of membranes or tubes, minimal use of chemical and maintenance) where vapor generation (flashing) utilizes the enthalpy difference between the sprayed feed seawater and the saturated vapor enthalpy of the vessels. Concomitantly, vapor is condensed with spray droplets of cooler water (potable) in adjacent condenser vessels, employing a simple design concept. We present detailed design and real seawater experiments data of a DCSEC system for the first time. The water production cost is calculated as $0.52/m3, which is one of the lowest figures reported compared to commercial processes presented by Global Water Intelligence

An investigation of factors associated with the health and well-being of HIV-infected or HIV-affected older people in rural South Africa

BackgroundDespite the severe impact of HIV in sub-Saharan Africa, the health of older people aged 50+ is often overlooked owing to the dearth of data on the direct and indirect effects of HIV on older people's health status and well-being. The aim of this study was to examine correlates of health and well-being of HIV-infected older people relative to HIV-affected people in rural South Africa, defined as participants with an HIV-infected or death of an adult child due to HIV-related cause. MethodsData were collected within the Africa Centre surveillance area using instruments adapted from the World Health Organization (WHO) Study on global AGEing and adult health (SAGE). A stratified random sample of 422 people aged 50+ participated. We compared the health correlates of HIV-infected to HIV-affected participants using ordered logistic regressions. Health status was measured using three instruments: disability index, quality of life and composite health score. ResultsMedian age of the sample was 60 years (range 50-94). Women HIV-infected (aOR 0.15, 95% confidence interval (CI) 0.08-0.29) and HIV-affected (aOR 0.20, 95% CI 0.08-0.50), were significantly less likely than men to be in good functional ability. Women's adjusted odds of being in good overall health state were similarly lower than men's; while income and household wealth status were stronger correlates of quality of life. HIV-infected participants reported better functional ability, quality of life and overall health state than HIV-affected participants. Discussion and Conclusions The enhanced healthcare received as part of anti-retroviral treatment as well as the considerable resources devoted to HIV care appear to benefit the overall well-being of HIV-infected older people; whereas similar resources have not been devoted to the general health needs of HIV uninfected older people. Given increasing numbers of older people, policy and programme interventions are urgently needed to holistically meet the health and well-being needs of older people beyond the HIV-related care system. <br/

The use of thermographic imaging to evaluate therapeutic response in human tumour xenograft models

YesNon-invasive methods to monitor tumour growth are an important goal in cancer drug development. Thermographic imaging systems offer potential in this area, since a change in temperature is known to be induced due to changes within the tumour microenvironment. This study demonstrates that this imaging modality can be applied to a broad range of tumour xenografts and also, for the first time, the methodology’s suitability to assess anti-cancer agent efficacy. Mice bearing subcutaneously implanted H460 lung cancer xenografts were treated with a novel vascular disrupting agent, ICT-2552, and the cytotoxin doxorubicin. The effects on tumour temperature were assessed using thermographic imaging over the first 6 hours post-administration and subsequently a further 7 days. For ICT-2552 a significant initial temperature drop was observed, whilst for both agents a significant temperature drop was seen compared to controls over the longer time period. Thus thermographic imaging can detect functional differences (manifesting as temperature reductions) in the tumour response to these anti-cancer agents compared to controls. Importantly, these effects can be detected in the first few hours following treatment and therefore the tumour is observable non-invasively. As discussed, this technique will have considerable 3Rs benefits in terms of reduction and refinement of animal use.University of Bradfor