Membrane attachment of Slr0006 in Synechocystis sp PCC 6803 is determined by divalent ions

Slr0006 is one of the Synechocystis sp. PCC 6803 proteins strongly induced under carbon limiting conditions. Slr0006 has no predicted transmembrane helices or signal peptide sequence, yet it was exclusively recovered in the membrane fraction of Synechocystis, when the cells were broken in isolation buffers which contain divalent cations and are generally used for photosynthesis studies. Even subsequent washing of the membranes with high salt or various detergents did not release Slr0006, indicating strong binding of the Slr0006 protein to the membranes. Further, DNAse or RNAse treatment did not disturb the tight binding of Slr0006 protein to the membranes. Nevertheless, when the cells were broken in the absence of divalent cations, Slr0006 remained completely soluble. Binding of the Slr0006 to the membrane could not be properly reconstituted if the cations were added after breaking the cells in the absence of divalent ions. This unusual phenomenon has to be considered in identification and localization of other yet uncharacterized cyanobacterial proteins

Study of O-Phosphorylation Sites in Proteins Involved in Photosynthesis-Related Processes in Synechocystis sp Strain PCC 6803: Application of the SRM Approach

O-Phosphorylation has been shown in photosynthesis related proteins in a cyanobacterium Synechocystis sp. strain PCC 6803 (thereafter Synechocystis 6803), suggesting that phosphorylation of S, T, and Y residues might be important in photosynthesis-related processes. Investigation of biological roles of these phosphorylation events requires confident knowledge of the phosphorylated sites and prospects for their individual assessment. We performed phosphoproteomic analysis of Synechocystis 6803 using TiO2 enrichment of the phosphopeptides, followed by LC-MS/MS, and discovered 367 phosphorylation sites in 190 proteins participating in various cellular functions. Furthermore, we focused on the large group of phosphoproteins that are involved in light harvesting, photosynthesis driven electron flow, photoprotection, and CO2 fixation. The SRM approach was applied to verify/improve assignments of phosphorylation sites in these proteins and to investigate possibilities for analysis of phosphopeptide isomers. The SRM assays were designed for peptides comprising 45 phosphorylation sites. The assays contain peptide iRT values and Q1/Q3 transitions comprising those discriminating between phosphopeptide isoforms. The majority of investigated phosphopeptides and phosphorylated isoforms could be individually assessed with the SRM technique. The assays could be potentially used in future quantitative studies to evaluate an extent of phosphorylation in photosynthesis related proteins in Synechocystis 6803 cells challenged with various environmental stresses

Value of useful goods and ecosystem services from Agnalavelo sacred forest and their relationships with forest conservation

ABSTRACTAgnalavelo forest provides necessary natural resources to people who live in its surroundings (Communities of Mahaboboka, Amboronabo and Mikoboka in southwestern Madagascar). The aim of this study is to document goods and ecosystem services provided by Agnalavelo forest to local people and to use it as a tool for the identification of priorities for forest conservation. Oral interviews were undertaken from 2010–2013 with local communities living in the vicinity of Agnalavelo forest. This study also investigated forest resource use, conducted inventories of tree species, estimated wood biovolume, as well as the economic benefits associated with conservation due to carbon storage. Finally, we recorded felled trees caused by honey collection inside the forest and determine the cause for their slaughter. An investigation with the ownership of rice fields irrigated by rivers taking sources from Agnalavelo forest was also conducted. Based on field surveys and analysis, communities living around Agnalavelo forest draw substantial benefits for their daily life from the forest. Goods and ecosystem services are classified in the three categories (provisioning, cultural and regulating services) according to the Millennium Ecosystem Assessment (MEA). Cultural services are highly valuable to local people as the forest is a dwelling place for their ancestor’s spirits. Agnalavelo forest provides Non Wood Forest Products (NWFPs) such as foods, tools, magic and medicinal plants and fresh water for local people. It is able to store 152 tons of carbon per hectare which is very important for climate regulation in this dry southwestern part of Madagascar. Endemic tree species hosting bee hives are often felled during harvesting period. Agnalavelo forest conservation is very important not only with regards to its biodiversity but also for goods and services that it provides to local population.RÉSUMÉLa forêt d’Agnalavelo, sur les communes de Mahaboboka, Amboronabo et Mikoboka, au sud-ouest de Madagascar, fournit les ressources naturelles nécessaires pour la population riveraine. L’objectif de cette étude a été de documenter les biens et les services éco-systémiques fournis par la forêt d’Agnalavelo pour les populations locales, afin d’identifier les priorités pour la conservation de cette forêt. Des enquêtes auprès des communautés vivant à proximité de la forêt Agnalavelo ont été menées, entre 2010 et 2013, sur l'utilisation des ressources forestières. Des inventaires écologiques des espèces d'arbres forestiers utilisés ont été réalisés pour déterminer le biovolume ainsi que les bénéfices économiques associés à la conservation de la forêt d’Agnalavelo par le stockage de carbone. Un inventaire des arbres abattus le long d'une piste forestière et les causes de leurs abattages ont complété l’étude, ainsi que des enquêtes auprès des propriétaires des rizières irriguées par les rivières qui prennent leurs sources dans la forêt d’Agnalavelo qui ont révélé que les communautés riveraines en tirent profit dans leur quotidien. La forêt d’Agnalavelo offre trois catégories de biens et services écosystémiques, à savoir les services d’approvisionnement, les services culturels et les services de régulation. Les services culturels sont les plus importants pour la population locale. La forêt d’Agnalavelo fournit les produits forestiers non ligneux tels que de la nourriture, des outils, des plantes considérées comme magiques, des plantes médicinales et de l'eau douce pour la population locale. La forêt d’Agnalavelo peut stocker 152 tonnes de carbone par hectare, valeur importante pour la régulation du climat dans cette région sèche de Madagascar. Des arbres appartenant à des espèces endémiques de Madagascar et abritant des ruches sont souvent abattus lors de la récolte du miel. La conservation de la forêt d’Agnalavelo est importante aussi bien pour la biodiversité qu’elle héberge que pour les biens et services des écosystèmes qu'elle fournit à la population locale

Investigating the cyclic breaking of butyl-, methyland ethyl-biodiesel from waste vegetable oil using ultraviolet-visible spectrophotometry

The main advantage of biodiesel to fossil-diesel is attributed to the ester functional group in its structure. Many researchers have affirmed that the functional group assists the diesel engine to function at its peak. However, the efficiency of the biodiesel to keep the mechanical piston-strokes in the diesel engine is experimentally presumed low especially if the engine works for a long time. In this research, it was proposed that the cyclic break down of the ester functional group of biodiesel is a major disadvantage. Butanol, ethanol and methanol biodiesel were produced in the laboratory using waste vegetable oil from restaurant. The Ultraviolet-visible spectroscopy or spectrophotometer (UV–Vis) was used to investigate the cyclic break down in the Butyl-, Methyl- and Ethyl- biodiesel. The Ultraviolet-visible spectroscopy or spectrophotometer (UV–Vis) was used to probe the various biodiesel samples with a start and stop wavelength of 500 and 900 nm respectively. The wavelength interval was 1 nm at a high scanning speed. Between 500–550 and 800–850 nm, the Ethyl- and Butyl- biodiesel had an absorbance of 2.7 and 1.6 respectively with 3 peaks each. Methyl-biodiesel had the highest absorbance of 1.7 at 600–650 nm with 1 peak. The computational extrapolation of all outcomes affirms that cyclic breaking is highest in Butylbiodiesel. The most resilient biodiesel type was the Ethyl-biodiesel. However, it was recommended that cyclic breaking may be preserved by ratio-mixing of biodiesel with fossil-diesel

Drought stress-induced upregulation of components involved in ferredoxin-dependent cyclic electron transfer

Linear photosynthetic electron transfer, consisting of both Photosystem (PS) II and PSI, converts light energy into the chemical forms ATP and NADPH, whereas PSI cyclic electron transfer (CET) is exclusively involved in ATP synthesis. In the chloroplasts of higher plants, there are two partially redundant CET routes. The ferredoxin (FD) or ferredoxin-plastoquinone reductase (FQR)-dependent route cycles electrons from PSI to plastoquinone via ferredoxin (FD), while in the NDH-dependent route, NADPH donates electrons to the NDH-complex for reduction of the plastoquinone pool. In the present study, we show that drought stress induces transcriptional and translational upregulation of the PCR5 and PGRL1 genes, which are the only characterized components of the FQR-dependent CET thus far. In contrast, the expression of the NDH-H gene, a representative of the NDH-complex, did not differ between the drought-stressed and the control plants. The overall expression level of the ferredoxin-NADP(+)-oxidoreductase (FNR) genes increased upon drought stress, with a concomitant release of FNR from the thylakoid membrane. Moreover, drought stress accelerated the rate of P700(+) re-reduction, which may indicate induction of CET. Responses of the PSAE, FD and PSAD gene families upon drought stress are also described. (C) 2010 Elsevier GmbH. All rights reserved

Integrating research evidence and physical activity policy making-REPOPA project

Evidence shows that regular physical activity is enhanced by supporting environment. Studies are needed to integrate research evidence into health enhancing, cross-sector physical activity (HEPA) policy making. This article presents the rationale, study design, measurement procedures and the initial results of the first phase of six European countries in a five-year research project (2011–2016), REsearch into POlicy to enhance Physical Activity (REPOPA). REPOPA is programmatic research; it consists of linked studies; the first phase studied the use of evidence in 21 policies in implementation to learn more in depth from the policy making process and carried out 86 qualitative stakeholder interviews. The second, ongoing phase builds on the central findings of the first phase in each country; it consists of two sets of interventions: game simulations to study cross-sector collaboration and organizational change processes in the use of evidence and locally tailored interventions to increase knowledge integration. The results of the first two study phases will be tested and validated among policy makers and other stakeholders in the third phase using a Delphi process. Initial results from the first project phase showed the lack of explicit evidence use in HEPA policy making. Facilitators and barriers of the evidence use were the availability of institutional resources and support but also networking between researchers and policy makers. REPOPA will increase understanding use of research evidence in different contexts; develop guidance and tools and establish sustainable structures such as networks and platforms between academics and policy makers across relevant sectors

Public awareness of cancer in Britain: a population-based survey of adults

*_Objective:_* To assess public awareness of cancer warning signs, anticipated delay, and perceived barriers to seeking medical advice in the British population. 
Methods: We carried out a population-based survey using face-to-face, computer-assisted interviews to administer the Cancer Awareness Measure (CAM), a newly-developed, validated measure of cancer awareness. The sample included 2216 adults (970 male and 1246 female) recruited as part of the Office for National Statistics Opinions Survey using stratified probability sampling.

*_Results:_* Awareness of cancer warning signs was low when open-ended (recall) questions were used and higher with closed (recognition) questions; but on either measure, awareness was lower in those who were male, younger, and from lower socioeconomic status (SES) groups or ethnic minorities. The most commonly endorsed barriers to help-seeking were difficulty making an appointment, worry about wasting the doctor’s time and worry about what would be found. Emotional barriers were more prominent in lower SES groups and practical barriers (e.g. too busy) more prominent in higher SES groups. Anticipated delay was lower in ethnic minority and lower SES groups. In multivariate analysis, higher symptom awareness was associated with lower anticipated delay, and more barriers with greater anticipated delay.

*_Conclusions:_* A combination of public education about symptoms and empowerment to seek medical advice, as well as support at primary care level, could enhance early presentation and improve cancer outcomes