12 research outputs found

    Driver Fusions and Their Implications in the Development and Treatment of Human Cancers.

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    Gene fusions represent an important class of somatic alterations in cancer. We systematically investigated fusions in 9,624 tumors across 33 cancer types using multiple fusion calling tools. We identified a total of 25,664 fusions, with a 63% validation rate. Integration of gene expression, copy number, and fusion annotation data revealed that fusions involving oncogenes tend to exhibit increased expression, whereas fusions involving tumor suppressors have the opposite effect. For fusions involving kinases, we found 1,275 with an intact kinase domain, the proportion of which varied significantly across cancer types. Our study suggests that fusions drive the development of 16.5% of cancer cases and function as the sole driver in more than 1% of them. Finally, we identified druggable fusions involving genes such as TMPRSS2, RET, FGFR3, ALK, and ESR1 in 6.0% of cases, and we predicted immunogenic peptides, suggesting that fusions may provide leads for targeted drug and immune therapy

    Study on changes in ultrastructure of Banana cv. Grand Naine during ripening

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    The periodical changes occurred at tissue level in fruit pulp and peel of banana cv. Grand Naine belongs to AAA genome was studied during storage period. In banana, structural modification in cell walls became apparent at advanced stages of ripening and showed predominantly dissolution of the middle lamella and gradual degradation of starch granules during ripening in fruit pulp and peel. In this study, four physiological stages of ripening of banana fruit peel and pulp were examined periodically under scanning electron microscope, elucidated degradation of starch granules at the time of ripening
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