The gut microbiota and the liver. Pathophysiological and clinical implications

peer-reviewedThe term microbiota is used to describe the complete population of microorganisms that populate a certain location, such as the gut, and is preferred to the term flora as the former incorporates not just bacteria but also archaea, viruses, and other microorganisms, such as protozoa. Though the potential role of the microbiota (through such concepts as ‘‘the putrefactive principle associated with faeces’’ and ‘‘intestinal toxins’’) in the pathogenesis of systemic disorders has been recognized since antiquity, a firm scientific basis for a role for the gut microbiome in liver disease did not emerge until the middle of the last century with the recognition of the relationship between hepatic coma and the absorption of nitrogenous substances from the intestine [1]. This was followed by the description of abundant coliforms in the small intestine of cirrhotics [2] and the role of bacteria was clinched by trials demonstrating that antibiotics led to clinical improvement in hepatic encephalopathy (HE) [3]. Subsequently, these same gut-derived bacteria were implicated in another complication of chronic liver disease and portal hypertension, spontaneous bacterial peritonitis. Most recently, more credence has been given to a suggestion that has lingered in the background for decades, namely, that the gut microbiota might play a role in the pathogenesis or progression of certain liver diseases, including alcoholic liver disease [4], non-alcoholic fatty liver disease (NAFLD) and non-alcoholic steato-hepatitis (NASH) [5], total parenteral nutrition (TPN)/intestinal failure-related liver disease (IFALD) [6], and primary sclerosing cholangitis (PSC) [7], either through the direct effects of bacteria or their products, via inflammatory mediators such as tumor necrosis factor a (TNF), whose release had been triggered by constituents of the microbiota, or, as in the case of primary sclerosing cholangitis (PSC), through cross-reactivity between microbial antigens and human tissue components (e.g., atypical anti-nuclear cytoplasmic antibodies (p-ANCA), in PSC, recognize both tubulin beta isoform 5 in human neutrophils, and the bacterial cell division protein FtsZ) [8]. Indeed, inflammatory mediators have also been implicated in the development and maintenance of the hyperdynamic circulation that is a feature of portal hypertension [9], in impairing liver function and contributing to haemostatic failure [10]. It is in these contexts that modulation of the microbiota has emerged as a potential therapeutic strategy in the management of liver diseas

Astrochemistry and Astrophotonics for an Antarctic Observatory

Due to its location and climate, Antarctica offers unique conditions for long-period observations across a broad wavelength regime, where important diagnostic lines for molecules and ions can be found, that are essential to understand the chemical properties of the interstellar medium. In addition to the natural benefits of the site, new technologies, resulting from astrophotonics, may allow miniaturised instruments, that are easier to winterise and advanced filters to further reduce the background in the infrared.Comment: 4 pages, to be published in EAS Publications Series, Vol. 40, Proc. of 3rd ARENA conferenc

Solitons in polarized double layer quantum Hall systems

A new manifestation of interlayer coherence in strongly polarized double layer quantum Hall systems with total filling factor $\nu=1$ in the presence of a small or zero tunneling is theoretically predicted. It is shown that moving (for small tunneling) and spatially localized (for zero tunneling) stable pseudospin solitons develop which could be interpreted as mobile or static charge-density excitations. The possibility of their experimental observation is also discussed.Comment: Phys. Rev. B (accepted

Localizability of Tachyonic Particles and Neutrinoless Double Beta Decay

The quantum field theory of superluminal (tachyonic) particles is plagued with a number of problems, which include the Lorentz non-invariance of the vacuum state, the ambiguous separation of the field operator into creation and annihilation operators under Lorentz transformations, and the necessity of a complex reinterpretation principle for quantum processes. Another unsolved question concerns the treatment of subluminal components of a tachyonic wave packets in the field-theoretical formalism, and the calculation of the time-ordered propagator. After a brief discussion on related problems, we conclude that rather painful choices have to be made in order to incorporate tachyonic spin-1/2 particles into field theory. We argue that the field theory needs to be formulated such as to allow for localizable tachyonic particles, even if that means that a slight unitarity violation is introduced into the S matrix, and we write down field operators with unrestricted momenta. We find that once these choices have been made, the propagator for the neutrino field can be given in a compact form, and the left-handedness of the neutrino as well as the right-handedness of the antineutrino follow naturally. Consequences for neutrinoless double beta decay and superluminal propagation of neutrinos are briefly discussed.Comment: 12 pages, 5 figure

Bias-voltage induced phase-transition in bilayer quantum Hall ferromagnets

We consider bilayer quantum Hall systems at total filling factor $\nu=1$ in presence of a bias voltage $\Delta_v$ which leads to different filling factors in each layer. We use auxiliary field functional integral approach to study mean-field solutions and collective excitations around them. We find that at large layer separation, the collective excitations soften at a finite wave vector leading to the collapse of quasiparticle gap. Our calculations predict that as the bias voltage is increased, bilayer systems undergo a phase transition from a compressible state to a $\nu=1$ phase-coherent state {\it with charge imbalance}. We present simple analytical expressions for bias-dependent renormalized charge imbalance and pseudospin stiffness which are sensitive to the softening of collective modes.Comment: 12 pages, 5 figures. Minor changes, one reference adde

Holocene black carbon in Antarctica paralleled Southern Hemisphere climate

Black carbon (BC) and other biomass-burning (BB) aerosols are critical components of climate forcing but quantification, predictive climate modeling, and policy decisions have been hampered by limited understanding of the climate drivers of BB and by the lack of long-term records. Prior modeling studies suggested that increased Northern Hemisphere anthropogenic BC emissions increased recent temperatures and regional precipitation, including a northward shift in the Inter-Tropical Convergence Zone (ITCZ). Two Antarctic ice cores were analyzed for BC and the longest record shows that the highest BC deposition during the Holocene occurred ~8-6k years before present in a period of relatively high austral burning season and low growing season insolation. Atmospheric transport modeling suggests South America (SA) as the dominant source of modern Antarctic BC and, consistent with the ice-core record, climate model experiments using mid-Holocene and preindustrial insolation simulate comparable increases in carbon loss due to fires in SA during the mid-Holocene. SA climate proxies document a northward shifted ITCZ and weakened SA Summer Monsoon (SASM) during this period, with associated impacts on hydroclimate and burning. A second Antarctic ice core spanning the last 2.5k years documents similar linkages between hydroclimate and BC, with the lowest deposition during the Little Ice Age characterized by a southerly shifted ITCZ and strengthened SASM. These new results indicate that insolation-driven changes in SA hydroclimate and BB, likely linked to the position of the ITCZ, modulated Antarctic BC deposition during most of the Holocene and suggests connections and feedbacks between future BC emissions and hydroclimate. Plain Language Summary Future anthropogenic-driven climate change may impact wildfires, yet predicting future changes is hampered by few long-term records of natural wildfires, particularly for the Southern Hemisphere. We document large variations in black carbon deposition during the past 14,000 years from an Antarctic ice core. Black carbon is a tracer for wildfires and a significant climate forcing agent. We show that black carbon in Antarctica closely followed Southern Hemisphere hydroclimate and strength of the South American Summer Monsoon. With future predictions showing significant low-latitude changes in precipitation under increased emissions, the climate-fire linkages presented here suggest future changes South American biomass burning

Can the Pioneer anomaly be of gravitational origin? A phenomenological answer

In order to satisfy the equivalence principle, any non-conventional mechanism proposed to gravitationally explain the Pioneer anomaly, in the form in which it is presently known from the so-far analyzed Pioneer 10/11 data, cannot leave out of consideration its impact on the motion of the planets of the Solar System as well, especially those orbiting in the regions in which the anomalous behavior of the Pioneer probes manifested itself. In this paper we, first, discuss the residuals of the right ascension \alpha and declination \delta of Uranus, Neptune and Pluto obtained by processing various data sets with different, well established dynamical theories (JPL DE, IAA EPM, VSOP). Second, we use the latest determinations of the perihelion secular advances of some planets in order to put on the test two gravitational mechanisms recently proposed to accommodate the Pioneer anomaly based on two models of modified gravity. Finally, we adopt the ranging data to Voyager 2 when it encountered Uranus and Neptune to perform a further, independent test of the hypothesis that a Pioneer-like acceleration can also affect the motion of the outer planets of the Solar System. The obtained answers are negative.Comment: Latex2e, 26 pages, 6 tables, 2 figure, 47 references. It is the merging of gr-qc/0608127, gr-qc/0608068, gr-qc/0608101 and gr-qc/0611081. Final version to appear in Foundations of Physic

The Pioneer Anomaly in the Light of New Data

The radio-metric tracking data received from the Pioneer 10 and 11 spacecraft from the distances between 20-70 astronomical units from the Sun has consistently indicated the presence of a small, anomalous, blue-shifted Doppler frequency drift that limited the accuracy of the orbit reconstruction for these vehicles. This drift was interpreted as a sunward acceleration of a_P = (8.74+/-1.33)x10^{-10} m/s^2 for each particular spacecraft. This signal has become known as the Pioneer anomaly; the nature of this anomaly is still being investigated. Recently new Pioneer 10 and 11 radio-metric Doppler and flight telemetry data became available. The newly available Doppler data set is much larger when compared to the data used in previous investigations and is the primary source for new investigation of the anomaly. In addition, the flight telemetry files, original project documentation, and newly developed software tools are now used to reconstruct the engineering history of spacecraft. With the help of this information, a thermal model of the Pioneers was developed to study possible contribution of thermal recoil force acting on the spacecraft. The goal of the ongoing efforts is to evaluate the effect of on-board systems on the spacecrafts' trajectories and possibly identify the nature of this anomaly. Techniques developed for the investigation of the Pioneer anomaly are applicable to the New Horizons mission. Analysis shows that anisotropic thermal radiation from on-board sources will accelerate this spacecraft by ~41 x 10^{-10} m/s^2. We discuss the lessons learned from the study of the Pioneer anomaly for the New Horizons spacecraft.Comment: 19 pages, 5 figure

Carbon clusters near the crossover to fullerene stability

The thermodynamic stability of structural isomers of $\mathrm{C}_{24}$, $\mathrm{C}_{26}$, $\mathrm{C}_{28}$ and $\mathrm{C}_{32}$, including fullerenes, is studied using density functional and quantum Monte Carlo methods. The energetic ordering of the different isomers depends sensitively on the treatment of electron correlation. Fixed-node diffusion quantum Monte Carlo calculations predict that a $\mathrm{C}_{24}$ isomer is the smallest stable graphitic fragment and that the smallest stable fullerenes are the $\mathrm{C}_{26}$ and $\mathrm{C}_{28}$ clusters with $\mathrm{C}_{2v}$ and $\mathrm{T}_{d}$ symmetry, respectively. These results support proposals that a $\mathrm{C}_{28}$ solid could be synthesized by cluster deposition.Comment: 4 pages, includes 4 figures. For additional graphics, online paper and related information see http://www.tcm.phy.cam.ac.uk/~prck

Bioactivity of umbelliprenin, the major component found in the seeds of Angelica sylvestris

Se ha evaluado la actividad antibacteriana y antioxidante de la umbelliprenina (1), una cumarina de sesquiterpenil, aislada como el componente principal presente en extractos de n-hexano y diclorometano de semillas de Angelica sylvestris (Apiaceae). También se ha evaluado la toxicidad general de 1 mediante el bioensayo de letalidad de gambas en salmuera (BSL).Umbelliprenin (1), a sesquiterpenyl coumarin, isolated as the major component present in the n-hexane and dichloromethane extracts of the seeds of Angelica sylvestris (Apiaceae), has been assessed for antibacterial and antioxidant activities. General toxicity of 1 has also been evaluated by the brine shrimp lethality (BSL) bioassay