Mechanoelectric feedback in cardiomyocyte monolayers and whole hearts in response to stretch

Stretch has been shown to induce electrophysiological changes in the whole heart and cardiomyocyte monolayer models. However, the mechano-electric mechanisms responsible for these changes are still not completely understood. In this project, micropatterned cardiomyocyte monolayers were anisotropically stretched in order to investigate two hypotheses: the increase in action potential duration (APD) and decrease in conduction velocity (CV) in response to stretch and the effect of stretch-activated channel blockers on these electrophysiological changes. The results obtained showed a decrease in APD in response to stretch in all experiments. Regarding CV, a decrease during propagation in the longitudinal direction (along the long axis of the aligned cardiomyocytes) and an increase during propagation in the transverse direction (along the short axis of the aligned cardiomyocytes) were observed in response to stretch. These electrophysiological changes did not seem altered by the presence of 70 μM and 85 μM streptomycin. However, the results for the APD have to be considered with caution due to limitations of the data analysis procedur

L6DNet: Light 6 DoF Network for Robust and Precise Object Pose Estimation with Small Datasets

Estimating the 3D pose of an object is a challenging task that can be considered within augmented reality or robotic applications. In this paper, we propose a novel approach to perform 6 DoF object pose estimation from a single RGB-D image. We adopt a hybrid pipeline in two stages: data-driven and geometric respectively. The data-driven step consists of a classification CNN to estimate the object 2D location in the image from local patches, followed by a regression CNN trained to predict the 3D location of a set of keypoints in the camera coordinate system. To extract the pose information, the geometric step consists in aligning the 3D points in the camera coordinate system with the corresponding 3D points in world coordinate system by minimizing a registration error, thus computing the pose. Our experiments on the standard dataset LineMod show that our approach is more robust and accurate than state-of-the-art methods. The approach is also validated to achieve a 6 DoF positioning task by visual servoing.Comment: This work has been accepted at IEEE Robotics and Automation Letter

Responses of soil hexapod communities to increasing nitrogen in a subarctic grassland

Altres ajuts: acords transformatius de la UABThe warming of boreal ecosystems accelerates decomposition and increases nitrogen (N) availability. The impact of increased N on subarctic soil fauna communities, however, remains poorly understood. We investigated the response of soil hexapods to a N addition experiment in a subarctic grassland. We characterized the soil hexapod communities using environmental DNA metabarcoding and analyzed the levels of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), microbial carbon (Cmic), and microbial nitrogen (Nmic). N addition increased DON and Nmic, while DOC and Cmic pools remained unchanged. Furthermore, N addition caused shifts in soil hexapod community compositional diversity between control and N plots in herbivore and microbivore taxa. The levels of DON and Nmic strongly correlated with these shifts, explaining 54% and 45% of the compositional variability, respectively. This study demonstrates a clear link between N availability and shifts in soil hexapod communities, associated to changes in microbial and dissolved N pools in subarctic grasslands

Responses of soil hexapod communities to warming are mediated by microbial carbon and nitrogen in a subarctic grassland

Altres ajuts: acords transformatius de la UABWarming in subarctic ecosystems will be two-fold higher compared to lower latitudes under current climate change projections. While the effects of warming in northern ecosystems on plants and microorganisms have been extensively studied, the responses of soil fauna have received much less attention, despite their important role in regulating key soil processes. We analyzed the response of soil hexapod communities in a subarctic grassland exposed to a natural geothermal gradient in Iceland with increases of +3 and + 6 °C above ambient temperature. We characterized hexapod communities using environmental DNA (eDNA) metabarcoding. We analyzed the amounts of microbial carbon (Cmic), microbial N (Nmic), dissolved organic C (DOC) and dissolved organic N (DON) and then assessed whether these variables could help to account for the compositional dissimilarity of ground hexapod communities across temperatures. The increases in soil temperature did lead to changes in the composition of hexapod communities. The compositional differences caused by +6 °C plots were correlated with a decrease in Cmic and Nmic, soil DOC and DON. Our results highlight the response of soil hexapods to warming, and their interaction with microbial biomass ultimately correlated with changes in the availabilities of soil C and N

Diversity dynamics in New Caledonia: towards the end of the museum model?

<p>Abstract</p> <p>Background</p> <p>The high diversity of New Caledonia has traditionally been seen as a result of its Gondwanan origin, old age and long isolation under stable climatic conditions (the museum model). Under this scenario, we would expect species diversification to follow a constant rate model. Alternatively, if New Caledonia was completely submerged after its breakup from Gondwana, as geological evidence indicates, we would expect species diversification to show a characteristic slowdown over time according to a diversity-dependent model where species accumulation decreases as space is filled.</p> <p>Results</p> <p>We reanalyze available datasets for New Caledonia and reconstruct the phylogenies using standardized methodologies; we use two ultrametrization alternatives; and we take into account phylogenetic uncertainty as well as incomplete taxon sampling when conducting diversification rate constancy tests. Our results indicate that for 8 of the 9 available phylogenies, there is significant evidence for a diversification slowdown. For the youngest group under investigation, the apparent lack of evidence of a significant slowdown could be because we are still observing the early phase of a logistic growth (i.e. the clade may be too young to exhibit a change in diversification rates).</p> <p>Conclusions</p> <p>Our results are consistent with a diversity-dependent model of diversification in New Caledonia. In opposition to the museum model, our results provide additional evidence that original New Caledonian biodiversity was wiped out during the episode of submersion, providing an open and empty space facilitating evolutionary radiations.</p

PHYLOPYR: The genetic information of Pyrenean plants accessible to society

Póster presentado en el IV Simposio Anual de la Sociedad Española de Botánica, Universidad de León, 17-18 de noviembre de 202

Effectively incorporating selected multimedia content into medical publications

Until fairly recently, medical publications have been handicapped by being restricted to non-electronic formats, effectively preventing the dissemination of complex audiovisual and three-dimensional data. However, authors and readers could significantly profit from advances in electronic publishing that permit the inclusion of multimedia content directly into an article. For the first time, the de facto gold standard for scientific publishing, the portable document format (PDF), is used here as a platform to embed a video and an audio sequence of patient data into a publication. Fully interactive three-dimensional models of a face and a schematic representation of a human brain are also part of this publication. We discuss the potential of this approach and its impact on the communication of scientific medical data, particularly with regard to electronic and open access publications. Finally, we emphasise how medical teaching can benefit from this new tool and comment on the future of medical publishing

Decay of similarity across tropical forest communities : integrating spatial distance with soil nutrients

Altres ajuts: Acord transformatiu CRUE-CSICUnderstanding the mechanisms that drive the change of biotic assemblages over space and time is the main quest of community ecology. Assessing the relative importance of dispersal and environmental species selection in a range of organismic sizes and motilities has been a fruitful strategy. A consensus for whether spatial and environmental distances operate similarly across spatial scales and taxa, however, has yet to emerge. We used censuses of four major groups of organisms (soil bacteria, fungi, ground insects, and trees) at two observation scales (1-m sampling point vs. 2,500-m plots) in a topographically standardized sampling design replicated in two tropical rainforests with contrasting relationships between spatial distance and nutrient availability. We modeled the decay of assemblage similarity for each taxon set and site to assess the relative contributions of spatial distance and nutrient availability distance. Then, we evaluated the potentially structuring effect of tree composition over all other taxa. The similarity of nutrient content in the litter and topsoil had a stronger and more consistent selective effect than did dispersal limitation, particularly for bacteria, fungi, and trees at the plot level. Ground insects, the only group assessed with the capacity of active dispersal, had the highest species turnover and the flattest nonsignificant distance−decay relationship, suggesting that neither dispersal limitation nor nutrient availability were fundamental drivers of their community assembly at this scale of analysis. Only the fungal communities at one of our study sites were clearly coordinated with tree composition. The spatial distance at the smallest scale was more important than nutrient selection for the bacteria, fungi, and insects. The lower initial similarity and the moderate variation in composition identified by these distance-decay models, however, suggested that the effects of stochastic sampling were important at this smaller spatial scale. Our results highlight the importance of nutrients as one of the main environmental drivers of rainforest communities irrespective of organismic or propagule size and how the overriding effect of the analytical scale influences the interpretation, leading to the perception of greater importance of dispersal limitation and ecological drift over selection associated with environmental niches at decreasing observation scales

Bringing traits back in the equation : A roadmap to understand species redistribution

Acknowledgments This research is a product of the BIOSHIFTS working group funded by the synthesis center (CESAB) of the French Foundation for Research on Biodiversity (FRB; www.fondationbiodiversite.fr) and the project FRAGSHIFTS funded by the Ministry of Ecological Transition (MTE), French Office for Biodiversity (OFB), and the French Foundation for Research on Biodiversity (FRB). We thank Holly Embke and two reviewers (including Tom Luhring) for their time and constructive comments that have improved the initial submission.Peer reviewe