173 research outputs found
Targeting the Progression of Parkinson’s Disease
By the time a patient first presents with symptoms of Parkinson’s disease at the clinic, a significant proportion (50-70%) of the cells in the substantia nigra (SN) has already been destroyed. This degeneration progresses until, within a few years, most of the cells have died. Except for rare cases of familial PD, the initial trigger for cell loss is unknown. However, we do have some clues as to why the damage, once initiated, progresses unabated. It would represent a major advance in therapy to arrest cell loss at the stage when the patient first presents at the clinic. Current therapies for Parkinson’s disease focus on relieving the motor symptoms of the disease, these unfortunately lose their effectiveness as the neurodegeneration and symptoms progress. Many experimental approaches are currently being investigated attempting to alter the progression of the disease. These range from replacement of the lost neurons to neuroprotective therapies; each of these will be briefly discussed in this review. The main thrust of this review is to explore the interactions between dopamine, alpha synuclein and redox-active metals. There is abundant evidence suggesting that destruction of SN cells occurs as a result of a self-propagating series of reactions involving dopamine, alpha synuclein and redox-active metals. A potent reducing agent, the neurotransmitter dopamine has a central role in this scheme, acting through redox metallo-chemistry to catalyze the formation of toxic oligomers of alpha-synuclein and neurotoxic metabolites including 6-hydroxydopamine. It has been hypothesized that these feed the cycle of neurodegeneration by generating further oxidative stress. The goal of dissecting and understanding the observed pathological changes is to identify therapeutic targets to mitigate the progression of this debilitating disease
Probing Reflection from Aerosols with the Near-infrared Dayside Spectrum of WASP-80b
The presence of aerosols is intimately linked to the global energy budget and the composition of a planet's atmosphere. Their ability to reflect incoming light prevents energy from being deposited into the atmosphere, and they shape the spectra of exoplanets. We observed five near-infrared secondary eclipses of WASP-80b with the Wide Field Camera 3 (WFC3) aboard the Hubble Space Telescope to provide constraints on the presence and properties of atmospheric aerosols. We detect a broadband eclipse depth of 34 ± 10 ppm for WASP-80b. We detect a higher planetary flux than expected from thermal emission alone at 1.6σ, which hints toward the presence of reflecting aerosols on this planet's dayside, indicating a geometric albedo of Ag < 0.33 at 3σ. We paired the WFC3 data with Spitzer data and explored multiple atmospheric models with and without aerosols to interpret this spectrum. Albeit consistent with a clear dayside atmosphere, we found a slight preference for near-solar metallicities and for dayside clouds over hazes. We exclude soot haze formation rates higher than 10−10.7 g cm−2s−1 and tholin formation rates higher than 10−12.0 g cm−2s−1 at 3σ. We applied the same atmospheric models to a previously published WFC3/Spitzer transmission spectrum for this planet and found weak haze formation. A single soot haze formation rate best fits both the dayside and the transmission spectra simultaneously. However, we emphasize that no models provide satisfactory fits in terms of the chi-square of both spectra simultaneously, indicating longitudinal dissimilarity in the atmosphere's aerosol composition
The low-lying excitations of polydiacetylene
The Pariser-Parr-Pople Hamiltonian is used to calculate and identify the
nature of the low-lying vertical transition energies of polydiacetylene. The
model is solved using the density matrix renormalisation group method for a
fixed acetylenic geometry for chains of up to 102 atoms. The non-linear optical
properties of polydiacetylene are considered, which are determined by the
third-order susceptibility. The experimental 1Bu data of Giesa and Schultz are
used as the geometric model for the calculation. For short chains, the
calculated E(1Bu) agrees with the experimental value, within solvation effects
(ca. 0.3 eV). The charge gap is used to characterise bound and unbound states.
The nBu is above the charge gap and hence a continuum state; the 1Bu, 2Ag and
mAg are not and hence are bound excitons. For large chain lengths, the nBu
tends towards the charge gap as expected, strongly suggesting that the nBu is
the conduction band edge. The conduction band edge for PDA is agreed in the
literature to be ca. 3.0 eV. Accounting for the strong polarisation effects of
the medium and polaron formation gives our calculated E(nBu) ca. 3.6 eV, with
an exciton binding energy of ca. 1.0 eV. The 2Ag state is found to be above the
1Bu, which does not agree with relaxed transition experimental data. However,
this could be resolved by including explicit lattice relaxation in the Pariser-
Parr-Pople-Peierls model. Particle-hole separation data further suggest that
the 1Bu, 2Ag and mAg are bound excitons, and that the nBu is an unbound
exciton.Comment: LaTeX, 23 pages, 4 postscript tables and 8 postscript figure
Large-scale Bright Fronts in the Solar Corona: A Review of "EIT waves"
``EIT waves" are large-scale coronal bright fronts (CBFs) that were first
observed in 195 \AA\ images obtained using the Extreme-ultraviolet Imaging
Telescope (EIT) onboard the \emph{Solar and Heliospheric Observatory (SOHO)}.
Commonly called ``EIT waves", CBFs typically appear as diffuse fronts that
propagate pseudo-radially across the solar disk at velocities of 100--700 km
s with front widths of 50-100 Mm. As their speed is greater than the
quiet coronal sound speed (200 km s) and comparable to the
local Alfv\'{e}n speed (1000 km s), they were initially
interpreted as fast-mode magnetoacoustic waves ().
Their propagation is now known to be modified by regions where the magnetosonic
sound speed varies, such as active regions and coronal holes, but there is also
evidence for stationary CBFs at coronal hole boundaries. The latter has led to
the suggestion that they may be a manifestation of a processes such as Joule
heating or magnetic reconnection, rather than a wave-related phenomena. While
the general morphological and kinematic properties of CBFs and their
association with coronal mass ejections have now been well described, there are
many questions regarding their excitation and propagation. In particular, the
theoretical interpretation of these enigmatic events as magnetohydrodynamic
waves or due to changes in magnetic topology remains the topic of much debate.Comment: 34 pages, 19 figure
On the Nature and Genesis of EUV Waves: A Synthesis of Observations from SOHO, STEREO, SDO, and Hinode
A major, albeit serendipitous, discovery of the SOlar and Heliospheric
Observatory mission was the observation by the Extreme Ultraviolet Telescope
(EIT) of large-scale Extreme Ultraviolet (EUV) intensity fronts propagating
over a significant fraction of the Sun's surface. These so-called EIT or EUV
waves are associated with eruptive phenomena and have been studied intensely.
However, their wave nature has been challenged by non-wave (or pseudo-wave)
interpretations and the subject remains under debate. A string of recent solar
missions has provided a wealth of detailed EUV observations of these waves
bringing us closer to resolving their nature. With this review, we gather the
current state-of-art knowledge in the field and synthesize it into a picture of
an EUV wave driven by the lateral expansion of the CME. This picture can
account for both wave and pseudo-wave interpretations of the observations, thus
resolving the controversy over the nature of EUV waves to a large degree but
not completely. We close with a discussion of several remaining open questions
in the field of EUV waves research.Comment: Solar Physics, Special Issue "The Sun in 360",2012, accepted for
publicatio
A Framework for Verifying Data-Centric Protocols
International audienceData centric languages, such as recursive rule based languages, have been proposed to program distributed applications over networks. They simplify greatly the code, while still admitting efficient distributed execution. We show that they also provide a promising approach to the verification of distributed protocols, thanks to their data centric orientation, which allows us to explicitly handle global structures such as the topology of the network. We consider a framework using an original formalization in the Coq proof assistant of a distributed computation model based on message passing with either synchronous or asynchronous behavior. The declarative rules of the Netlog language for specifying distributed protocols and the virtual machines for evaluating these rules are encoded in Coq as well. We consider as a case study tree protocols, and show how this framework enables us to formally verify them in both the asynchronous and synchronous setting
Whole-genome sequencing of Schistosoma mansoni reveals extensive diversity with limited selection despite mass drug administration
Control and elimination of the parasitic disease schistosomiasis relies on mass administration of praziquantel. Whilst these programmes reduce infection prevalence and intensity, their impact on parasite transmission and evolution is poorly understood. Here we examine the genomic impact of repeated mass drug administration on Schistosoma mansoni populations with documented reduced praziquantel efficacy. We sequenced whole-genomes of 198 S. mansoni larvae from 34 Ugandan children from regions with contrasting praziquantel exposure. Parasites infecting children from Lake Victoria, a transmission hotspot, form a diverse panmictic population. A single round of treatment did not reduce this diversity with no apparent population contraction caused by long-term praziquantel use. We find evidence of positive selection acting on members of gene families previously implicated in praziquantel action, but detect no high frequency functionally impactful variants. As efforts to eliminate schistosomiasis intensify, our study provides a foundation for genomic surveillance of this major human parasite
Coronal Dimmings and the Early Phase of a CME Observed with STEREO and Hinode/EIS
We investigate the early phase of the 13 February 2009 coronal mass ejection
(CME). Observations with the twin STEREO spacecraft in quadrature allow us to
compare for the first time in one and the same event the temporal evolution of
coronal EUV dimmings, observed simultaneously on-disk and above the limb. We
find that these dimmings are synchronized and appear during the impulsive
acceleration phase of the CME, with the highest EUV intensity drop occurring a
few minutes after the maximum CME acceleration. During the propagation phase
two confined, bipolar dimming regions, appearing near the footpoints of a
pre-flare sigmoid structure, show an apparent migration away from the site of
the CME-associated flare. Additionally, they rotate around the 'center' of the
flare site, i.e., the configuration of the dimmings exhibits the same
'sheared-to-potential' evolution as the postflare loops. We conclude that the
motion pattern of the twin dimmings reflects not only the eruption of the flux
rope, but also the ensuing stretching of the overlying arcade. Finally, we find
that: (1) the global-scale dimmings, expanding from the source region of the
eruption, propagate with a speed similar to that of the leaving CME front; (2)
the mass loss occurs mainly during the period of strongest CME acceleration.
Two hours after the eruption Hinode/EIS observations show no substantial plasma
outflow, originating from the 'open' field twin dimming regions.Comment: accepted for publication in Solar Physic
Photochemically produced SO2 in the atmosphere of WASP-39b
S.-M.T. is supported by the European Research Council advanced grant EXOCONDENSE (no. 740963; principal investigator: R. T. Pierrehumbert). E.K.H.L. is supported by the SNSF Ambizione Fellowship grant (no. 193448). X.Z. is supported by NASA Exoplanet Research grant 80NSSC22K0236. O.V. acknowledges funding from the ANR project ‘EXACT’ (ANR-21-CE49-0008-01), from the Centre National d’Études Spatiales (CNES) and from the CNRS/INSU Programme National de Planétologie (PNP). L.D. acknowledges support from the European Union H2020-MSCA-ITN-2109 under grant no. 860470 (CHAMELEON) and the KU Leuven IDN/19/028 grant Escher. This work benefited from the 2022 Exoplanet Summer Program at the Other Worlds Laboratory (OWL) at the University of California, Santa Cruz, a programme financed by the Heising-Simons Foundation. T.D. is an LSSTC Catalyst Fellow. J.K. is an Imperial College Research Fellow. B.V.R. is a 51 Pegasi b Fellow. L.W. is an NHFP Sagan Fellow. A.D.F. is an NSF Graduate Research Fellow.Photochemistry is a fundamental process of planetary atmospheres that regulates the atmospheric composition and stability1. However, no unambiguous photochemical products have been detected in exoplanet atmospheres so far. Recent observations from the JWST Transiting Exoplanet Community Early Release Science Program2,3 found a spectral absorption feature at 4.05 μm arising from sulfur dioxide (SO2) in the atmosphere of WASP-39b. WASP-39b is a 1.27-Jupiter-radii, Saturn-mass (0.28 MJ) gas giant exoplanet orbiting a Sun-like star with an equilibrium temperature of around 1,100 K (ref. 4). The most plausible way of generating SO2 in such an atmosphere is through photochemical processes5,6. Here we show that the SO2 distribution computed by a suite of photochemical models robustly explains the 4.05-μm spectral feature identified by JWST transmission observations7 with NIRSpec PRISM (2.7σ)8 and G395H (4.5σ)9. SO2 is produced by successive oxidation of sulfur radicals freed when hydrogen sulfide (H2S) is destroyed. The sensitivity of the SO2 feature to the enrichment of the atmosphere by heavy elements (metallicity) suggests that it can be used as a tracer of atmospheric properties, with WASP-39b exhibiting an inferred metallicity of about 10× solar. We further point out that SO2 also shows observable features at ultraviolet and thermal infrared wavelengths not available from the existing observations.Publisher PDFPeer reviewe
An Observational Overview of Solar Flares
We present an overview of solar flares and associated phenomena, drawing upon
a wide range of observational data primarily from the RHESSI era. Following an
introductory discussion and overview of the status of observational
capabilities, the article is split into topical sections which deal with
different areas of flare phenomena (footpoints and ribbons, coronal sources,
relationship to coronal mass ejections) and their interconnections. We also
discuss flare soft X-ray spectroscopy and the energetics of the process. The
emphasis is to describe the observations from multiple points of view, while
bearing in mind the models that link them to each other and to theory. The
present theoretical and observational understanding of solar flares is far from
complete, so we conclude with a brief discussion of models, and a list of
missing but important observations.Comment: This is an article for a monograph on the physics of solar flares,
inspired by RHESSI observations. The individual articles are to appear in
Space Science Reviews (2011
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