Mobility Measurements Probe Conformational Changes in Membrane Proteins due to Tension

The function of membrane-embedded proteins such as ion channels depends crucially on their conformation. We demonstrate how conformational changes in asymmetric membrane proteins may be inferred from measurements of their diffusion. Such proteins cause local deformations in the membrane, which induce an extra hydrodynamic drag on the protein. Using membrane tension to control the magnitude of the deformations and hence the drag, measurements of diffusivity can be used to infer--- via an elastic model of the protein--- how conformation is changed by tension. Motivated by recent experimental results [Quemeneur et al., Proc. Natl. Acad. Sci. USA, 111 5083 (2014)] we focus on KvAP, a voltage-gated potassium channel. The conformation of KvAP is found to change considerably due to tension, with its `walls', where the protein meets the membrane, undergoing significant angular strains. The torsional stiffness is determined to be 26.8 kT at room temperature. This has implications for both the structure and function of such proteins in the environment of a tension-bearing membrane.Comment: Manuscript: 4 pages, 4 figures. Supplementary Material: 8 pages, 1 figur

Chameleon effect and the Pioneer anomaly

The possibility that the apparent anomalous acceleration of the Pioneer 10 and 11 spacecraft may be due, at least in part, to a chameleon field effect is examined. A small spacecraft, with no thin shell, can have a more pronounced anomalous acceleration than a large compact body, such as a planet, having a thin shell. The chameleon effect seems to present a natural way to explain the differences seen in deviations from pure Newtonian gravity for a spacecraft and for a planet, and appears to be compatible with the basic features of the Pioneer anomaly, including the appearance of a jerk term. However, estimates of the size of the chameleon effect indicate that its contribution to the anomalous acceleration is negligible. We conclude that any inverse-square component in the anomalous acceleration is more likely caused by an unmodelled reaction force from solar-radiation pressure, rather than a chameleon field effect.Comment: 16 pages; to appear in Phys.Rev.

Excitation of the molecular gas in the nuclear region of M82

We present high-resolution HIFI spectroscopy of the nucleus of the archetypical starburst galaxy M 82. Six ^(12)CO lines, 2 ^(13)CO lines and 4 fine-structure lines have been detected. Besides showing the effects of the overall velocity structure of the nuclear region, the line profiles also indicate the presence of multiple components with different optical depths, temperatures, and densities in the observing beam. The data have been interpreted using a grid of PDR models. It is found that the majority of the molecular gas is in low density (n = 10^(3.5) cm^(-3)) clouds, with column densities of N_H = 10^(21.5) cm^(-2) and a relatively low UV radiation field (G_0 = 10^2). The remaining gas is predominantly found in clouds with higher densities (n = 10^5 cm^(-3)) and radiation fields (G_0 = 10^(2.75)), but somewhat lower column densities (N_H = 10^(21.2) cm^(-2)). The highest J CO lines are dominated by a small (1% relative surface filling) component, with an even higher density (n = 10^6 cm^(-3)) and UV field (G_0 = 10^(3.25)). These results show the strength of multi-component modelling for interpretating the integrated properties of galaxies

Study and prototype of data system interactions for the Earth Observing System Data and Information System

A crucial part of the Earth Observing System (EOS) is its Data and Information System (EOSDIS). The success of EOS depends not only on its instruments and science studies, but also on its ability to help scientists integrate data sets of geophysical and biological measurements taken by various instruments and investigators. NASA contractors have completed Phase B studies of EOSDIS, in particular its architecture, functionality, and user interfacing. At this point in time, it may seem impossible to exercise the EOSDIS or any of its components since they do not exist; i.e., if the EOSDIS is accepted as a totally new system, distinct from any existing DIS. However, if EOSDIS is seen as evolving from existing data systems, then some limited prototyping studies can be conducted by using currently functioning systems. In support of both the EOSDIS Science Advisory Panel and the EOSDIS Project, a prototyping activity was carried out by a cross section of interdisciplinary scientists. That prototyping activity is summarized and some conclusions are drawn that can be used by NASA-Goddard to evaluate and modify the specifications soon to be released in an RFP to build EOSDIS

Sensitivity of Nonrenormalizable Trajectories to the Bare Scale

Working in scalar field theory, we consider RG trajectories which correspond to nonrenormalizable theories, in the Wilsonian sense. An interesting question to ask of such trajectories is, given some fixed starting point in parameter space, how the effective action at the effective scale, Lambda, changes as the bare scale (and hence the duration of the flow down to Lambda) is changed. When the effective action satisfies Polchinski's version of the Exact Renormalization Group equation, we prove, directly from the path integral, that the dependence of the effective action on the bare scale, keeping the interaction part of the bare action fixed, is given by an equation of the same form as the Polchinski equation but with a kernel of the opposite sign. We then investigate whether similar equations exist for various generalizations of the Polchinski equation. Using nonperturbative, diagrammatic arguments we find that an action can always be constructed which satisfies the Polchinski-like equation under variation of the bare scale. For the family of flow equations in which the field is renormalized, but the blocking functional is the simplest allowed, this action is essentially identified with the effective action at Lambda = 0. This does not seem to hold for more elaborate generalizations.Comment: v1: 23 pages, 5 figures, v2: intro extended, refs added, published in jphy

Echoes of multiple outbursts of Sagittarius A* revealed by Chandra

The relatively rapid spatial and temporal variability of the X-ray radiation from some molecular clouds near the Galactic center shows that this emission component is due to the reflection of X-rays generated by a source that was luminous in the past, most likely the central supermassive black hole, Sagittarius A*. Studying the evolution of the molecular cloud reflection features is therefore a key element to reconstruct Sgr A*'s past activity. The aim of the present work is to study this emission on small angular scales in order to characterize the source outburst on short time scales. We use Chandra high-resolution data collected from 1999 to 2011 to study the most rapid variations detected so far, those of clouds between 5' and 20' from Sgr A* towards positive longitudes. Our systematic spectral-imaging analysis of the reflection emission, notably of the Fe Kalpha line at 6.4 keV and its associated 4-8 keV continuum, allows us to characterize the variations down to 15" angular scale and 1-year time scale. We reveal for the first time abrupt variations of few years only and in particular a short peaked emission, with a factor of 10 increase followed by a comparable decrease, that propagates along the dense filaments of the Bridge cloud. This 2-year peaked feature contrasts with the slower 10-year linear variations we reveal in all the other molecular structures of the region. Based on column density constraints, we argue that these two different behaviors are unlikely to be due to the same illuminating event. The variations are likely due to a highly variable active phase of Sgr A* sometime within the past few hundred years, characterized by at least two luminous outbursts of a few-year time scale and during which the Sgr A* luminosity went up to at least 10^39 erg/s.Comment: 17 pages, 16 figures, Accepted for publication in Astronomy & Astrophysic

Electroconvection in a Suspended Fluid Film: A Linear Stability Analysis

A suspended fluid film with two free surfaces convects when a sufficiently large voltage is applied across it. We present a linear stability analysis for this system. The forces driving convection are due to the interaction of the applied electric field with space charge which develops near the free surfaces. Our analysis is similar to that for the two-dimensional B\'enard problem, but with important differences due to coupling between the charge distribution and the field. We find the neutral stability boundary of a dimensionless control parameter ${\cal R}$ as a function of the dimensionless wave number ${\kappa}$. ${\cal R}$, which is proportional to the square of the applied voltage, is analogous to the Rayleigh number. The critical values ${{\cal R}_c}$ and ${\kappa_c}$ are found from the minimum of the stability boundary, and its curvature at the minimum gives the correlation length ${\xi_0}$. The characteristic time scale ${\tau_0}$, which depends on a second dimensionless parameter ${\cal P}$, analogous to the Prandtl number, is determined from the linear growth rate near onset. ${\xi_0}$ and ${\tau_0}$ are coefficients in the Ginzburg-Landau amplitude equation which describes the flow pattern near onset in this system. We compare our results to recent experiments.Comment: 36 pages, 7 included eps figures, submitted to Phys Rev E. For more info, see http://mobydick.physics.utoronto.ca