Caractérisation phénotypique et génétique du riz africain (Oryza glaberrima Steud) phenotypic and genetic characterization of african rice (oryza glaberrima steud)

The agronomic interest of African rice and the morphological similarities with other species, arouse the necessity to characterize African rice for recovery and conservation. The present study aims primarily to characterize phenotypically and genetically African rice for better exploitation in aid of rice producers and consumers. Indeed, the phenotypic characteristics of the rice accessions examined have been determined in two agronomics systems (upland and irrigated) carried out about 235 accessions of African rice; and afterwards, genetic characterization using a specific marker has been carried. At the end of the analyzes, with regard to the phenotypic characters, 22 O.sativa or interspecific accessions differing morphologically on several descriptors were identified. Genetically, out of 19 profiles revealed on a 935-bp band, 14 confirmed the phenotypic results. This study shows that 221 out of 235 accessions are O. glaberrima rice. These results show that the accessions of different species analyzed were confused during the collection. They also seems to validate the possibility of hybridization between the two rice species in peasant environment. The accessions characterized strengthen the conservation effort of African rice. This collection can be used for future studies, particularly with perspective to selection and running African rice with the possibility to establish a genetic model to facilitate the transfer of useful genes from O.glaberrima to O.sativa, while controlling the reproductive barrier. Thus, it will be easy to better exploit the genetic diversity of the African species of cultivated rice

Euclidean Approach to the Entropy for a Scalar Field in Rindler-like Space-Times

The off-shell entropy for a massless scalar field in a D-dimensional Rindler-like space-time is investigated within the conical Euclidean approach in the manifold C_\be\times\M^N, C_\be being the 2-dimensional cone, making use of the zeta-function regularisation. Due to the presence of conical singularities, it is shown that the relation between the zeta-function and the heat kernel is non trivial and, as first pointed out by Cheeger, requires a separation between small and large eigenvalues of the Laplace operator. As a consequence, in the massless case, the (naive) non existence of the Mellin transform is by-passed by the Cheeger's analytical continuation of the zeta-function on manifold with conical singularities. Furthermore, the continuous spectrum leads to the introduction of smeared traces. In general, it is pointed out that the presence of the divergences may depend on the smearing function and they arise in removing the smearing cutoff. With a simple choice of the smearing function, horizon divergences in the thermodynamical quantities are recovered and these are similar to the divergences found by means of off-shell methods like the brick wall model, the optical conformal transformation techniques or the canonical path integral method.Comment: 17 pages, LaTex. A sign error corrected and few comments adde

Larvicidal activity of Ramalina usnea lichen against Aedes aegypti

AbstractThe larvicidal activity of the methanol extract, fractions and compounds 2-hydroxy-4-methoxy-6-propyl-methyl benzoate and (+)-usnic acid identified from the lichen Ramalina usnea (L.) R. Howe, Ramalinaceae, was tested against the third instar larvae of the Aedes aegypti mosquito. The methanol extract and three fractions showed activity, killing 100% and 96.6% of the larvae at a concentration of 150μg/ml at 24h. The isolated compounds, 2-hydroxy-4-methoxy-6-propyl-methyl benzoate and the (+)-usnic acid showed larvicidal activity, presenting LC50 values of 4.85 and 4.48μg/ml, respectively. This is the first study of its kind reporting the larvicidal activity against the A. aegypti mosquito with compound (1)

β-Lactam antibiotics and vancomycin inhibit the growth of planktonic and biofilm Candida spp.: An additional benefit of antibiotic-lock therapy?

AbstractThe aim of this study was to evaluate the effects of cefepime, meropenem, piperacillin/tazobactam (TZP) and vancomycin on strains of Candida albicans and Candida tropicalis in planktonic and biofilm forms. Twenty azole-derivative-resistant strains of C. albicans (n=10) and C. tropicalis (n=10) were tested. The susceptibility of planktonic Candida spp. to the antibacterial agents was investigated by broth microdilution. The XTT reduction assay was performed to evaluate the viability of growing and mature biofilms following exposure to these drugs. Minimum inhibitory concentrations (MICs) ranged from 0.5mg/mL to 2mg/mL for cefepime, TZP and vancomycin and from 0.5mg/mL to 1mg/mL for meropenem and the drugs also caused statistically significant reductions in biofilm cellular activity both in growing and mature biofilm. Since all of the tested drugs are commonly used in patients with hospital-acquired infections and in those with catheter-related infections under antibiotic-lock therapy, it may be possible to obtain an additional benefit from antibiotic-lock therapy with these drugs, namely the control of Candida biofilm formation

Reaction Diffusion Models in One Dimension with Disorder

We study a large class of 1D reaction diffusion models with quenched disorder using a real space renormalization group method (RSRG) which yields exact results at large time. Particles (e.g. of several species) undergo diffusion with random local bias (Sinai model) and react upon meeting. We obtain the large time decay of the density of each specie, their associated universal amplitudes, and the spatial distribution of particles. We also derive the spectrum of exponents which characterize the convergence towards the asymptotic states. For reactions with several asymptotic states, we analyze the dynamical phase diagram and obtain the critical exponents at the transitions. We also study persistence properties for single particles and for patterns. We compute the decay exponents for the probability of no crossing of a given point by, respectively, the single particle trajectories ($\theta$) or the thermally averaged packets ($\bar{\theta}$). The generalized persistence exponents associated to n crossings are also obtained. Specifying to the process $A+A \to \emptyset$ or A with probabilities $(r,1-r)$, we compute exactly the exponents $\delta(r)$ and $\psi(r)$ characterizing the survival up to time t of a domain without any merging or with mergings respectively, and $\delta_A(r)$ and $\psi_A(r)$ characterizing the survival up to time t of a particle A without any coalescence or with coalescences respectively. $\bar{\theta}, \psi, \delta$ obey hypergeometric equations and are numerically surprisingly close to pure system exponents (though associated to a completely different diffusion length). Additional disorder in the reaction rates, as well as some open questions, are also discussed.Comment: 54 pages, Late

Absorbing-state phase transitions in fixed-energy sandpiles

We study sandpile models as closed systems, with conserved energy density $\zeta$ playing the role of an external parameter. The critical energy density, $\zeta_c$, marks a nonequilibrium phase transition between active and absorbing states. Several fixed-energy sandpiles are studied in extensive simulations of stationary and transient properties, as well as the dynamics of roughening in an interface-height representation. Our primary goal is to identify the universality classes of such models, in hopes of assessing the validity of two recently proposed approaches to sandpiles: a phenomenological continuum Langevin description with absorbing states, and a mapping to driven interface dynamics in random media. Our results strongly suggest that there are at least three distinct universality classes for sandpiles.Comment: 41 pages, 23 figure

Molecular characterization of irinotecan (SN-38) resistant human breast cancer cell lines

Background: Studies in taxane and/or anthracycline refractory metastatic breast cancer (mBC) patients have shown approximately 30% response rates to irinotecan. Hence, a significant number of patients will experience irinotecan-induced side effects without obtaining any benefit. The aim of this study was to lay the groundwork for development of predictive biomarkers for irinotecan treatment in BC. Methods: We established BC cell lines with acquired or de novo resistance to SN-38, by exposing the human BC cell lines MCF-7 and MDA-MB-231 to either stepwise increasing concentrations over 6months or an initial high dose of SN-38 (the active metabolite of irinotecan), respectively. The resistant cell lines were analyzed for cross-resistance to other anti-cancer drugs, global gene expression, growth rates, TOP1 and TOP2A gene copy numbers and protein expression, and inhibition of the breast cancer resistance protein (ABCG2/BCRP) drug efflux pump. Results: We found that the resistant cell lines showed 7-100 fold increased resistance to SN-38 but remained sensitive to docetaxel and the non-camptothecin Top1 inhibitor LMP400. The resistant cell lines were characterized by Top1 down-regulation, changed isoelectric points of Top1 and reduced growth rates. The gene and protein expression of ABCG2/BCRP was up-regulated in the resistant sub-lines and functional assays revealed BCRP as a key mediator of SN-38 resistance. Conclusions: Based on our preclinical results, we suggest analyzing the predictive value of the BCRP in breast cancer patients scheduled for irinotecan treatment. Moreover, LMP400 should be tested in a clinical setting in breast cancer patients with resistance to irinotecan