40 research outputs found
An Integrated EMBA for an Integrated World
Internal and external stakeholders to the academic community have expressed concern about the MBA and have urged systemic transformation in curriculum content and course delivery. Corporations want business leaders who can provide creative solutions for problems that cut across business functions. Organizations want business graduates who have been taught how to think about business not as a series of functional smokestacks but as an integrated whole
General and specific patterns of cortical gene expression as spatial correlates of complex cognitive functioning
Gene expression varies across the brain. This spatial patterning denotes specialised support for particular brain functions. However, the way that a given gene's expression fluctuates across the brain may be governed by general rules. Quantifying patterns of spatial covariation across genes would offer insights into the molecular characteristics of brain areas supporting, for example, complex cognitive functions. Here, we use principal component analysis to separate general and unique gene regulatory associations with cortical substrates of cognition. We find that the region-to-region variation in cortical expression profiles of 8235 genes covaries across two major principal components: gene ontology analysis suggests these dimensions are characterised by downregulation and upregulation of cell-signalling/modification and transcription factors. We validate these patterns out-of-sample and across different data processing choices. Brain regions more strongly implicated in general cognitive functioning (g; 3 cohorts, total meta-analytic N = 39,519) tend to be more balanced between downregulation and upregulation of both major components (indicated by regional component scores). We then identify a further 29 genes as candidate cortical spatial correlates of g, beyond the patterning of the two major components (|β| range = 0.18 to 0.53). Many of these genes have been previously associated with clinical neurodegenerative and psychiatric disorders, or with other health-related phenotypes. The results provide insights into the cortical organisation of gene expression and its association with individual differences in cognitive functioning
General and specific patterns of cortical gene expression as spatial correlates of complex cognitive functioning
Gene expression varies across the brain. This spatial patterning denotes specialised support for particular brain functions. However, the way that a given gene's expression fluctuates across the brain may be governed by general rules. Quantifying patterns of spatial covariation across genes would offer insights into the molecular characteristics of brain areas supporting, for example, complex cognitive functions. Here, we use principal component analysis to separate general and unique gene regulatory associations with cortical substrates of cognition. We find that the region-to-region variation in cortical expression profiles of 8235 genes covaries across two major principal components: gene ontology analysis suggests these dimensions are characterised by downregulation and upregulation of cell-signalling/modification and transcription factors. We validate these patterns out-of-sample and across different data processing choices. Brain regions more strongly implicated in general cognitive functioning (g; 3 cohorts, total meta-analytic N = 39,519) tend to be more balanced between downregulation and upregulation of both major components (indicated by regional component scores). We then identify a further 29 genes as candidate cortical spatial correlates of g, beyond the patterning of the two major components (|β| range = 0.18 to 0.53). Many of these genes have been previously associated with clinical neurodegenerative and psychiatric disorders, or with other health-related phenotypes. The results provide insights into the cortical organisation of gene expression and its association with individual differences in cognitive functioning
General and specific patterns of cortical gene expression as spatial correlates of complex cognitive functioning
We thank the participants of the three cohorts (UKB, Generation Scotland (STRADL) and LBC1936) for their participation and the research teams for their work in collecting, processing and giving access to these data for analysis. We are also thankful to the brain donors to the Allen Human Brain Atlas, BrainSpan Atlas and Human Brain Transcriptome Project, and to the people who collected and processed the data and made it openly available For the purpose of open access, the author has applied a CC-BY public copyright licence to any Author Accepted Manuscript version arising from this submission.Peer reviewe
Construction of a large scale integrated map of macrophage pathogen recognition and effector systems
<p>Abstract</p> <p>Background</p> <p>In an effort to better understand the molecular networks that underpin macrophage activation we have been assembling a map of relevant pathways. Manual curation of the published literature was carried out in order to define the components of these pathways and the interactions between them. This information has been assembled into a large integrated directional network and represented graphically using the modified Edinburgh Pathway Notation (mEPN) scheme.</p> <p>Results</p> <p>The diagram includes detailed views of the toll-like receptor (TLR) pathways, other pathogen recognition systems, NF-kappa-B, apoptosis, interferon signalling, MAP-kinase cascades, MHC antigen presentation and proteasome assembly, as well as selected views of the transcriptional networks they regulate. The integrated pathway includes a total of 496 unique proteins, the complexes formed between them and the processes in which they are involved. This produces a network of 2,170 nodes connected by 2,553 edges.</p> <p>Conclusions</p> <p>The pathway diagram is a navigable visual aid for displaying a consensus view of the pathway information available for these systems. It is also a valuable resource for computational modelling and aid in the interpretation of functional genomics data. We envisage that this work will be of value to those interested in macrophage biology and also contribute to the ongoing Systems Biology community effort to develop a standard notation scheme for the graphical representation of biological pathways.</p
SBML Level 3: an extensible format for the exchange and reuse of biological models
Systems biology has experienced dramatic growth in the number, size, and complexity of computational models. To reproduce simulation results and reuse models, researchers must exchange unambiguous model descriptions. We review the latest edition of the Systems Biology Markup Language (SBML), a format designed for this purpose. A community of modelers and software authors developed SBML Level 3 over the past decade. Its modular form consists of a core suited to representing reaction-based models and packages that extend the core with features suited to other model types including constraint-based models, reaction-diffusion models, logical network models, and rule-based models. The format leverages two decades of SBML and a rich software ecosystem that transformed how systems biologists build and interact with models. More recently, the rise of multiscale models of whole cells and organs, and new data sources such as single-cell measurements and live imaging, has precipitated new ways of integrating data with models. We provide our perspectives on the challenges presented by these developments and how SBML Level 3 provides the foundation needed to support this evolution
Guidelines for management of ischaemic stroke and transient ischaemic attack 2008
This article represents the update of the European Stroke Initiative Recommendations for Stroke Management. These guidelines cover both ischaemic stroke and transient ischaemic attacks, which are now considered to be a single entity. The article covers referral and emergency management, Stroke Unit service, diagnostics, primary and secondary prevention, general stroke treatment, specific treatment including acute management, management of complications, and rehabilitation
Demand management: The evaluation of price and due date negotiation strategies using simulation
The research considers the problem of demand management in a firm where the firm\u27s historical delivery service level reputation influences the number of quotation requests from its potential customers. Customers have a maximum and the firm has a minimum net price to due date tradeoff curve for each job. The demand management function bargains with the customer over price and promised due date. Bargaining finishes either with an agreed price and delivery date or with the customer refusing the firm\u27s bid and placing the order elsewhere. The firm\u27s objective is to maximize its long-term net revenue. The firm\u27s demand management negotiation strategy guides this bidding process. The research demonstrates the use of simulation to test different demand management bidding and negotiation strategies for different market and firm scenarios. The demonstration uses 16 scenarios to test the different demand management negotiation strategies with a model of a classical job shop in a classical market. The investigation examines finite scheduling-based due date estimation methods, as well as the more traditional parameter-based methods. This demonstration shows that it is possible to test different bidding policies, using a simulation model of a firm and its customers, and to obtain usable results
Comparing the outcomes of the different teaching modes: All-in-person, hybrid, and online, for different student demographic groups in a business school
The concept of hybrid mode education is spreading. Little research compares hybrid teaching modes to online and all in person (AIP) teaching modes. Nearly all this research assumes that there is no difference in the students entering AIP, hybrid, or online sections of a course. This study used data from four years of all the courses in the Coles College of Business at Kennesaw State University. The data set, which included individual student and course section outcomes, included full student demographics and the student’s university GPA at the start of the course. The results showed that for all demographics, students in hybrid course sections earned higher final course grades than those in online sections, which in turn, earned better final grades than those in AIP sections