A Comprehensive Survey of Brane Tilings

An infinite class of $4d$ $\mathcal{N}=1$ gauge theories can be engineered on the worldvolume of D3-branes probing toric Calabi-Yau 3-folds. This kind of setup has multiple applications, ranging from the gauge/gravity correspondence to local model building in string phenomenology. Brane tilings fully encode the gauge theories on the D3-branes and have substantially simplified their connection to the probed geometries. The purpose of this paper is to push the boundaries of computation and to produce as comprehensive a database of brane tilings as possible. We develop efficient implementations of brane tiling tools particularly suited for this search. We present the first complete classification of toric Calabi-Yau 3-folds with toric diagrams up to area 8 and the corresponding brane tilings. This classification is of interest to both physicists and mathematicians alike.Comment: 39 pages. Link to Mathematica modules provide

Targeted free energy perturbation

A generalization of the free energy perturbation identity is derived, and a computational strategy based on this result is presented. A simple example illustrates the efficiency gains that can be achieved with this method.Comment: 8 pages + 1 color figur

Combinatorial Alexander Duality -- a Short and Elementary Proof

Let X be a simplicial complex with the ground set V. Define its Alexander dual as a simplicial complex X* = {A \subset V: V \setminus A \notin X}. The combinatorial Alexander duality states that the i-th reduced homology group of X is isomorphic to the (|V|-i-3)-th reduced cohomology group of X* (over a given commutative ring R). We give a self-contained proof.Comment: 7 pages, 2 figure; v3: the sign function was simplifie

Gauge invariant reduction to the light-front

The problem of constructing gauge invariant currents in terms of light-cone bound-state wave functions is solved by utilising the gauging of equations method. In particular, it is shown how to construct perturbative expansions of the electromagnetic current in the light-cone formalism, such that current conservation is satisfied at each order of the perturbation theory.Comment: 12 pages, revtex

Using cascading Bloom filters to improve the memory usage for de Brujin graphs

De Brujin graphs are widely used in bioinformatics for processing next-generation sequencing data. Due to a very large size of NGS datasets, it is essential to represent de Bruijn graphs compactly, and several approaches to this problem have been proposed recently. In this work, we show how to reduce the memory required by the algorithm of [3] that represents de Brujin graphs using Bloom filters. Our method requires 30% to 40% less memory with respect to the method of [3], with insignificant impact to construction time. At the same time, our experiments showed a better query time compared to [3]. This is, to our knowledge, the best practical representation for de Bruijn graphs.Comment: 12 pages, submitte

d-wave pairing symmetry in cuprate superconductors

Phase-sensitive tests of pairing symmetry have provided strong evidence for predominantly d-wave pairing symmetry in both hole- and electron-doped high-Tc cuprate superconductors. Temperature dependent measurements in YBCO indicate that the d-wave pairing dominates, with little if any imaginary component, at all temperatures from 0.5K through Tc. In this article we review some of this evidence and discuss the implications of the universal d-wave pairing symmetry in the cuprates.Comment: 4 pages, M2S 2000 conference proceeding

Constraints on Supersymmetric Flavour Models from b->s gamma

We consider the effects of departures from minimal flavour violations (MFV) in the context of CMSSM-like theories. Second and third generation off-diagonal elements in the Yukawa, sfermion, and trilinear mass matrices are taken to be non-zero at the GUT scale. These are run down together with MSSM parameters to the electroweak scale. We apply constraints from fermion masses and CKM matrix elements to limit the range of the new free parameters of the model. We determine the effect of the departure from MFV on the branching ratio of b->s gamma. We find that only when the expansion parameter in the down-squark sector is relatively large there is a noticeable effect, which tends to relax the lower limit from b->s gamma on the universal gaugino mass. We also find that the expansion parameter associated with the slepton sector needs to be smaller than the corresponding parameter in the down-squark sector in order to be compliant with the bound imposed by the branching ratio of tau-> mu gamma.Comment: Comments: 43 pages, 14 figures. Version accepted for publication: typos corrected, rewritten for better understanding and references adde

Decoherence from a Chaotic Environment: An Upside Down "Oscillator" as a Model

Chaotic evolutions exhibit exponential sensitivity to initial conditions. This suggests that even very small perturbations resulting from weak coupling of a quantum chaotic environment to the position of a system whose state is a non-local superposition will lead to rapid decoherence. However, it is also known that quantum counterparts of classically chaotic systems lose exponential sensitivity to initial conditions, so this expectation of enhanced decoherence is by no means obvious. We analyze decoherence due to a "toy" quantum environment that is analytically solvable, yet displays the crucial phenomenon of exponential sensitivity to perturbations. We show that such an environment, with a single degree of freedom, can be far more effective at destroying quantum coherence than a heat bath with infinitely many degrees of freedom. This also means that the standard "quantum Brownian motion" model for a decohering environment may not be as universally applicable as it once was conjectured to be.Comment: RevTeX, 29 pages, 5 EPS figures. Substantially rewritten analysis, improved figures, additional references, and errors fixed. Final version (to appear in PRA

Indium-111-labeled polyclonal human immunoglobulin: identifying focal infection in patients positive for human immunodeficiency virus

Contains fulltext : 4753.pdf (publisher's version ) (Open Access

Determining the global minimum of Higgs potentials via Groebner bases - applied to the NMSSM

Determining the global minimum of Higgs potentials with several Higgs fields like the next-to-minimal supersymmetric extension of the Standard Model (NMSSM) is a non-trivial task already at the tree level. The global minimum of a Higgs potential can be found from the set of all its stationary points defined by a multivariate polynomial system of equations. We introduce here the algebraic Groebner basis approach to solve this system of equations. We apply the method to the NMSSM with CP conserving as well as CP violating parameters. The results reveal an interesting stationary-point structure of the potential. Requiring the global minimum to give the electroweak symmetry breaking observed in Nature excludes large parts of the parameter space.Comment: 10 pages, 2 figure