28 research outputs found

    Distribution and ecology of Carex secalina in the Czech Republic and Slovakia

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    Current and historical occurrence as well as coenotic affinity and ecology of Carex secalina in the Czech Republic and Slovakia are presented. The study is based on revision of herbarium specimens from 25 herbaria, literature data excerption and a field survey carried out during 2004-2010. Altogether, 168 sites were documented in the Czech Republic divided to two separate areas. Stabile occurrence trend was found in last decades, because 45 localities were documented in period 1975-1999 (27% of sites) and recent occurrence was confirmed at 42 localities (24% of sites). On the basis of our current knowledge the species was included into the IUCN threat category VU (vulnerable). In Slovakia, 19 localities of the species were recorded in total, but only 4 sites were confirmed recently (21% of sites recorded). However, only a small number of individuals was recorded there (less than 50 individuals in total) and half of this sites is acutely threatened by destruction (ploughing, secondary succession). Therefore, the C. secalina status in the Slovak Red List was changed to the IUCN category "critically endangered" (CR). Results of the study are summarised in the maps of historical and current species distribution. C. secalina usually occurred in halophytic grassland communities, especially in association Agrostio stoloniferae-Juncetum ranarii Vicherek 1962. However, it may occur in many other communities which suggest that the species had not well-defined coenotic relationships. On the basis of our knowledge, we consider C. secalina as an obligate halophyte

    Effects of typical and atypical antipsychotic drugs on gene expression profiles in the liver of schizophrenia subjects

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    <p>Abstract</p> <p>Background</p> <p>Although much progress has been made on antipsychotic drug development, precise mechanisms behind the action of typical and atypical antipsychotics are poorly understood.</p> <p>Methods</p> <p>We performed genome-wide expression profiling to study effects of typical antipsychotics and atypical antipsychotics in the postmortem liver of schizophrenia patients using microarrays (Affymetrix U133 plus2.0). We classified the subjects into typical antipsychotics (n = 24) or atypical antipsychotics (n = 26) based on their medication history, and compared gene expression profiles with unaffected controls (n = 34). We further analyzed individual antipsychotic effects on gene expression by sub-classifying the subjects into four major antipsychotic groups including haloperidol, phenothiazines, olanzapine and risperidone.</p> <p>Results</p> <p>Typical antipsychotics affected genes associated with nuclear protein, stress responses and phosphorylation, whereas atypical antipsychotics affected genes associated with golgi/endoplasmic reticulum and cytoplasm transport. Comparison between typical antipsychotics and atypical antipsychotics further identified genes associated with lipid metabolism and mitochondrial function. Analyses on individual antipsychotics revealed a set of genes (151 transcripts, FDR adjusted p < 0.05) that are differentially regulated by four antipsychotics, particularly by phenothiazines, in the liver of schizophrenia patients.</p> <p>Conclusion</p> <p>Typical antipsychotics and atypical antipsychotics affect different genes and biological function in the liver. Typical antipsychotic phenothiazines exert robust effects on gene expression in the liver that may lead to liver toxicity. The genes found in the current study may benefit antipsychotic drug development with better therapeutic and side effect profiles.</p

    Numerical Errors and Chaotic Behavior in Docking Simulations

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    This work examines the sensitivity of docking programs to tiny changes in ligand input files. The results show that nearly identical ligand input structures can produce dramatically different top-scoring docked poses. Even changing the atom order in a ligand input file can produce significantly different poses and scores. In well-behaved cases the docking variations are small and follow a normal distribution around a central pose and score, but in many cases the variations are large and reflect wildly different top scores and binding modes. The docking variations are characterized by statistical methods, and the sensitivity of high-throughput and more precise docking methods are compared. The results demonstrate that part of docking variation is due to numerical sensitivity and potentially chaotic effects in current docking algorithms and not solely due to incomplete ligand conformation and pose searching. These results have major implications for the way docking is currently used for pose prediction, ranking, and virtual screening

    Flexible Alignment of Small Molecules

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    Prevalence and Risk Factors of Problematic Internet Use among Hungarian Adult Recreational Esports Players

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    Background: Esports are highly prevalent in modern culture, particularly among young people, and are a healthy hobby for the majority of users. However, there is a possible link between video gaming (including esports) and problematic internet use (so-called internet addiction, IA), mostly involving adolescents. Methods: Here we present an online survey focusing on the prevalence and risk factors of internet addiction among adult esports players. Demographics included age, gender, family type, type of work, working years and daily internet use. Medical conditions associated with IA such as smoking, alcohol and drug intake, hypertension, diabetes, ischemic heart disease, musculoskeletal pain and history of depression were also recorded. Results: Overall, 2313 players including 176 females (7.6%) and 2137 males (92.4%) participated in our online survey. Age distribution was the following: 18&ndash;25 years 90.3% (2088/2313), 26&ndash;35 years 7.95% (184/2313), 36&ndash;45 years 0.86% (20/2313), 46&ndash;55 years 0.82% (19/2313), 56&ndash;62 years 0.04% (1/2313) and 62 years or older 0.04% (1/2313). Internet addiction was detected in 19.9% of players (461/2313) based on the Problematic Internet Use Questionnaire. In a multivariate analysis internet addiction was significantly associated with age between 18 and 25 (OR: 1.675, p = 0.002), being single (OR = 1.505, p = 0.014), internet use &gt; 6 h daily (OR = 4.338, p &lt; 0.001), having &lt; 3 children (OR: 2.037, p = 0.023) and having secondary employment (OR = 1.789, p = 0.037). Regular alcohol intake (OR = 18.357, p &lt; 0.001) and history of depression (OR= 5.361, p = 0.032) were also strongly correlated with IA. Conclusion: This is the first study from Hungary investigating the prevalence and risk factors of internet addiction among adult esports players. One out of five adult gamers suffered from IA. Our study also draws attention to increased risk within this group and risk factors such as younger age, family status and type of employment
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