365 research outputs found

    North Pacific internal tides from the Aleutian Ridge: Altimeter observations and modeling

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    Internal tides radiating into the North Pacific from the Aleutian Ridge near Amukta Pass are examined using 7 years of Topex/Poseidon altimeter data. The observations show coherent southward phase propagation at the M2 frequency over a distance of at least 1100 km into the central Pacific. Barotropic and baroclinic models are applied to study this internal tidal signal. Results from the barotropic model show that the strongest cross-slope volume and energy fluxes occur in the vicinity of Amukta Pass, helping to establish this region as an important site for baroclinic energy conversion along the eastern half of the ridge. A two-dimensional version of the Princeton Ocean Model is used to simulate internal tide generation and propagation. A comparison between the altimeter data south of the ridge and the sea-surface signature of the internal tide signal of the model shows good agreement for the phase, both close to the source and well into the far field. Comparison of the phase between model and data also provides evidence for wave refraction. This occurs due to the slow modulation of wavelength associated with the variation in the Coriolis parameter encountered as the internal tide propagates southward. The model results suggest that the net rate of conversion of barotropic to baroclinic energy is about 1.8 GW in the vicinity of Amukta Pass. This represents about 6% of the local barotropic energy flux across the ridge and perhaps 1% of global baroclinic conversion

    Considerations in the Calculation of Vertical Velocity in Three-Dimensional Circulation Models

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    The vertical velocity, w, in three-dimensional circulation models is typically computed from the three-dimensional continuity equation assuming that the depth-varying horizontal velocity field was calculated earlier in the solution sequence. Computing w in this way appears to require the solution of an over-determined system since the continuity equation is first order, yet w must satisfy two boundary conditions (one at the free surface and one at the bottom). At least three methods have been previously proposed to compute w: (i) the “traditional” method that solves the continuity equation with the bottom boundary condition and ignores the free surface boundary condition, (ii) a “vertical derivative” method that solves the vertical derivative of the continuity equation using both boundary conditions and (iii) an “adjoint” approach that minimizes a cost functional comprised of residuals in the continuity equation and in both boundary conditions. The latter solution is equivalent to the "traditional" solution plus a correction that increases linearly over the depth and is proportional to the misfit between the "traditional" solution at the surface and the surface boundary condition. In this paper we show that the "vertical derivative" method yields inaccurate and physically inconsistent results if it is discretized as has been previously proposed. However, if properly discretized the "vertical derivative" method is equivalent to the “adjoint” method if the cost function is weighted to exactly satisfy the boundary conditions. Furthermore, if the horizontal flow field satisfies the depth-integrated continuity equation locally, one of the boundary conditions is redundant and w obtained from the "traditional" method should match the free surface boundary condition. In this case, the “traditional,” “adjoint” and properly discretized “vertical derivative” approaches yield the same results for w. If the horizontal flow field is not locally mass conserving, the mass conservation error is transferred into the solution for w. This is particularly important for models that do not guarantee local mass conservation, such as some finite element models

    A Search for New Physics with the BEACON Mission

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    The primary objective of the Beyond Einstein Advanced Coherent Optical Network (BEACON) mission is a search for new physics beyond general relativity by measuring the curvature of relativistic space-time around Earth. This curvature is characterized by the Eddington parameter \gamma -- the most fundamental relativistic gravity parameter and a direct measure for the presence of new physical interactions. BEACON will achieve an accuracy of 1 x 10^{-9} in measuring the parameter \gamma, thereby going a factor of 30,000 beyond the present best result involving the Cassini spacecraft. Secondary mission objectives include: (i) a direct measurement of the "frame-dragging" and geodetic precessions in the Earth's rotational gravitomagnetic field, to 0.05% and 0.03% accuracy correspondingly, (ii) first measurement of gravity's non-linear effects on light and corresponding 2nd order spatial metric's effects to 0.01% accuracy. BEACON will lead to robust advances in tests of fundamental physics -- this mission could discover a violation or extension of general relativity and/or reveal the presence of an additional long range interaction in physics. BEACON will provide crucial information to separate modern scalar-tensor theories of gravity from general relativity, probe possible ways for gravity quantization, and test modern theories of cosmological evolution.Comment: 8 pages, 2 figures, 2 table

    Clinical, radiologic, pathologic, and molecular characteristics of long-term survivors of diffuse intrinsic pontine glioma (DIPG): a collaborative report from the International and European Society for Pediatric Oncology DIPG registries

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    Purpose Diffuse intrinsic pontine glioma (DIPG) is a brainstem malignancy with a median survival of < 1 year. The International and European Society for Pediatric Oncology DIPG Registries collaborated to compare clinical, radiologic, and histomolecular characteristics between short-term survivors (STSs) and long-term survivors (LTSs). Materials and Methods Data abstracted from registry databases included patients from North America, Australia, Germany, Austria, Switzerland, the Netherlands, Italy, France, the United Kingdom, and Croatia. Results Among 1,130 pediatric and young adults with radiographically confirmed DIPG, 122 (11%) were excluded. Of the 1,008 remaining patients, 101 (10%) were LTSs (survival ≄ 2 years). Median survival time was 11 months (interquartile range, 7.5 to 16 months), and 1-, 2-, 3-, 4-, and 5-year survival rates were 42.3% (95% CI, 38.1% to 44.1%), 9.6% (95% CI, 7.8% to 11.3%), 4.3% (95% CI, 3.2% to 5.8%), 3.2% (95% CI, 2.4% to 4.6%), and 2.2% (95% CI, 1.4% to 3.4%), respectively. LTSs, compared with STSs, more commonly presented at age < 3 or > 10 years (11% v 3% and 33% v 23%, respectively; P < .001) and with longer symptom duration ( P < .001). STSs, compared with LTSs, more commonly presented with cranial nerve palsy (83% v 73%, respectively; P = .008), ring enhancement (38% v 23%, respectively; P = .007), necrosis (42% v 26%, respectively; P = .009), and extrapontine extension (92% v 86%, respectively; P = .04). LTSs more commonly received systemic therapy at diagnosis (88% v 75% for STSs; P = .005). Biopsies and autopsies were performed in 299 patients (30%) and 77 patients (10%), respectively; 181 tumors (48%) were molecularly characterized. LTSs were more likely to harbor a HIST1H3B mutation (odds ratio, 1.28; 95% CI, 1.1 to 1.5; P = .002). Conclusion We report clinical, radiologic, and molecular factors that correlate with survival in children and young adults with DIPG, which are important for risk stratification in future clinical trials

    Smyd3 regulates cancer cell phenotypes and catalyzes histone H4 lysine 5 methylation

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    Smyd3 is a lysine methyltransferase implicated in chromatin and cancer regulation. Here we show that Smyd3 catalyzes histone H4 methylation at lysine 5 (H4K5me). This novel histone methylation mark is detected in diverse cell types and its formation is attenuated by depletion of Smyd3 protein. Further, Smyd3-driven cancer cell phenotypes require its enzymatic activity. Thus, Smyd3, via H4K5 methylation, provides a potential new link between chromatin dynamics and neoplastic disease

    The Milky Way's circular velocity curve between 4 and 14 kpc from APOGEE data

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    We measure the Milky Way's rotation curve over the Galactocentric range 4 kpc <~ R <~ 14 kpc from the first year of data from the Apache Point Observatory Galactic Evolution Experiment (APOGEE). We model the line-of-sight velocities of 3,365 stars in fourteen fields with b = 0 deg between 30 deg < l < 210 deg out to distances of 10 kpc using an axisymmetric kinematical model that includes a correction for the asymmetric drift of the warm tracer population (\sigma_R ~ 35 km/s). We determine the local value of the circular velocity to be V_c(R_0) = 218 +/- 6 km/s and find that the rotation curve is approximately flat with a local derivative between -3.0 km/s/kpc and 0.4 km/s/kpc. We also measure the Sun's position and velocity in the Galactocentric rest frame, finding the distance to the Galactic center to be 8 kpc < R_0 < 9 kpc, radial velocity V_{R,sun} = -10 +/- 1 km/s, and rotational velocity V_{\phi,sun} = 242^{+10}_{-3} km/s, in good agreement with local measurements of the Sun's radial velocity and with the observed proper motion of Sgr A*. We investigate various systematic uncertainties and find that these are limited to offsets at the percent level, ~2 km/s in V_c. Marginalizing over all the systematics that we consider, we find that V_c(R_0) 99% confidence. We find an offset between the Sun's rotational velocity and the local circular velocity of 26 +/- 3 km/s, which is larger than the locally-measured solar motion of 12 km/s. This larger offset reconciles our value for V_c with recent claims that V_c >~ 240 km/s. Combining our results with other data, we find that the Milky Way's dark-halo mass within the virial radius is ~8x10^{11} M_sun.Comment: submitted to Ap
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