Mandible size and shape in extant Ursidae (Carnivora, Mammalia): A tool for taxonomy and ecogeography

The family Ursidae is currently one of the taxonomic groups with the lowest number of species among Carnivora. Extant bear species exhibit broad ecological adaptations both at inter- and intraspecific level, and taxonomic issues within this family remain unresolved (i.e., the number of recognizable subspecies). Here, we investigate a sample of bear mandibles using two-dimensional geometric morphometrics to better characterize bear taxonomy and evolution with a focus on one of the most widespread species: the brown bear (Ursus arctos). Our analyses confirm that both size and shape data are useful continuous characters that discriminate with very high percentage of accuracy extant bears. We also identify two very distinct mandibular morphologies in the subspecies Ursus actos isabellinus and Ursus arctos marsicanus. These taxa exhibit a high degree of morphological differentiation possibly as a result of a long process of isolation. Ecogeographical variation occurs among bear mandibles with climate impacting the diversification of the whole family

Ecomorphology of radii in Canidae: Application to fragmentary fossils from Plio-Pleistocene hominin assemblages

Fragmentary long bone material from fossil Carnivora is rarely considered to support palaeoenvironmental reconstructions. Here, we use morphometry of the radius in extant carnivorans of the dog family (Canidae) to reconstruct the palaeobiology of extinct canids from Olduvai Gorge, Tanzania (Bed I and II) and Koobi Fora, Kenya. We use radius morphometrics to predict adaptation to prey size and introduce a new method for quantifying canid habitat adaptations based on the geographic distributions of the extant species sampled. Linear Discriminant Function Analyses (DFA) and cluster neighbour-joining algorithms are employed to investigate radial morphometrics as described by 29 linear measurements. Results of our analyses suggest that a phylogenetic signal is present in radial morphometrics, even if it does not allow us to accurately discriminate among genera. A binary prey size categorisation of “small-medium” versus “large” prey can be more accurately predicted than a habitat categorisation scheme (Open, Mixed, Closed). The East African fossil specimens examined show morphometric affinities with the golden jackal (Canis aureus) and coyote (Canis latrans) and are likely attributable to the genus Canis. Fragmentary fossil specimens from Olduvai Gorge are predicted as habitat generalists (Open for Bed I and Mixed for Bed II) adapted for hunting small-medium prey, whereas the specimen from Koobi Fora was predicted as inhabiting mixed habitats and adapted for killing large prey. This study supports the inclusion of fossil Canidae in palaeoecological analyses attempting to clarify the palaeoenvironment of early hominin fossil sites

Locomotory Adaptations in 3D Humerus Geometry of Xenarthra: Testing for Convergence

Three-dimensional (3D) models of fossil bones are increasingly available, thus opening a novel frontier in the study of organismal size and shape evolution. We provide an example of how photogrammetry can be combined with Geometric Morphometrics (GMM) techniques to study patterns of morphological convergence in the mammalian group of Xenarthra. Xenarthrans are currently represented by armadillos, sloths, and anteaters. However, this clade shows an incredibly diverse array of species and ecomorphotypes in the fossil record, including gigantic ground sloths and glyptodonts. Since the humerus is a weight-bearing bone in quadrupedal mammals and its morphology correlates with locomotor behavior, it provides an ideal bone to gain insight into adaptations of fossil species. A 3D sample of humerii belonging to extant and fossil Xenarthra allowed us to identify a significant phylogenetic signal and a strong allometric component in the humerus shape. Although no rate shift in the evolution of the humerus shape was recorded for any clade, fossorial and arboreal species humerii did evolve at significantly slower and faster paces, respectively, than the rest of the Xenarthran species. Significant evidence for morphological convergence found among the fossorial species and between the two tree sloth genera explains these patterns. These results suggest that the highly specialized morphologies of digging taxa and tree sloths represent major deviations from the plesiomorphic Xenarthran body plan, evolved several times during the history of the group

Secure4 : a secured research compute cluster

"Research Compute Support Services"--Slide 1

Ecogeographical Variation in Skull Shape of South-American Canids: Abiotic or Biotic Processes?

Species morphological changes can be mutually influenced by environmental or biotic factors, such as competition. South American canids represent a quite recent radiation of taxa that evolved forms very disparate in phenotype, ecology and behaviour. Today, in the central part of South America there is one dominant large species (the maned wolf, Chrysocyon brachyurus) that directly influence sympatric smaller taxa via interspecific killing. Further south, three species of similar sized foxes (Lycalopex spp.) share the same habitats. Such unique combination of taxa and geographic distribution makes South American dogs an ideal group to test for the simultaneous impact of climate and competition on phenotypic variation. Using geometric morphometrics, we quantified skull size and shape of 431 specimens belonging to the eight extant South American canid species: Atelocynus microtis, Cerdocyon thous, Ch. brachyurus, Lycalopex culpaeus, L. griseus, L. gymnocercus, L. vetulus and Speothos venaticus. South American canids are significantly different in both skull size and shape. The hypercarnivorous bush dog is mostly distinct in shape from all the other taxa while a degree of overlap in shape—but not size—occurs between species of the genus Lycalopex. Both climate and competition impacts interspecific morphological variation. We identified climatic adaptations as the main driving force of diversification for the South American canids. Competition has a lower degree of impact on their skull morphology although it might have played a role in the past, when canid community was richer in morphotypes

Elbow Joint Geometry in Bears (Ursidae, Carnivora): a Tool to Infer Paleobiology and Functional Adaptations of Quaternary Fossils

Bears are currently represented by eight species among Carnivora. Being all particularly large and generally plantigrade limits to certain extent their functional morphology so that inferences about their past diversification are difficult to achieve. We analyzed variation in bears’ elbow joint size and shape to reconstruct paleobiology of Quaternary fossil species. By using 2D geometric morphometrics, we were able to discriminate with high degree of accuracy species, locomotor and habitat adaptations among extant bears. The giant panda and the spectacled bear are well characterized by an enlarged medial epicondyle, while large members of the genus Ursus can be distinguished by their relatively longer and wider trochlea. Elbow joint size varies consistently among ecological categories of extant bears and is generally selected by discriminant function models providing a high degree of classification accuracy (> 80%). American genera Arctotherium and Arctodus are predicted as non-climbing species potentially adapted to open and mixed environments in agreement with their potentially opportunistic feeding behavior. They retain a wide medial epicondyle probably in relation to a high degree of forelimb dexterity. Cave bears are equally predicted as non-climbers adapted to open habitats while the middle Pleistocene Ursus deningeri and fossil Ursus arctos are generally classified as scansorial species with a preference towards mixed habitats. Our study is the first to demonstrate that fragmentary distal epiphyses also can be useful for interpreting functional morphology and ecological adaptations within the family Ursidae

Geometric morphometric analyses of sexual dimorphism and allometry in two sympatric snakes: Natrix helvetica (Natricidae) and Vipera berus (Viperidae)

The non-venomous grass snake (Natrix helvetica) and the venomous adder (Vipera berus) are two native species that are often found in sympatry in Great Britain and Europe. They occupy partially overlapping ecological niches and prey on small vertebrates, but use different feeding strategies. Here, we investigated the morphologies of grass snakes and adders from Dorset (UK) using twodimensional geometric morphometrics to assess the degree of sexual dimorphism in size and shape together with the relative impact of allometry and general body dimensions on head shape. Both species showed significant sexual dimorphism in head size, but not in head shape. We found a clear allometric pattern in N. helvetica, whereas allometry in V. berus was generally less pronounced. Body dimensions were strongly correlated with head shape in the grass snake, but not in the adder. The fact that V. berus is venomous appears to explain the lack of allometric patterns and the lack of an association between body dimensions and head shape. The high degree of size dimorphism identified in both species could originate from the advantages of reduced intraspecific competition that are conveyed by a partial differentiation in feeding morphology

Gastrostomies endoscopiques percutanées chez l'enfant

RESUME Une gastrostomie est un montage chirurgical d'ouverture d'un orifice cutané donnant un accès direct à l'estomac pour permettre l'alimentation et la décompression gastrique. La gastrostomie est indiquée au cours de certaines maladies chroniques de patients ayant un tube digestif fonctionnel. La gastrostomie percutanée par endoscopie (Percutaneous Endoscopie Gastrostomy PEG) a été décrite en 1977 par Michael W. Gauderer. La méthode est sûre et rapide. Peuvent en bénéficier les patients très affaiblis par leur maladie, pour lesquels une longue anesthésie est à éviter. La réalisation d'une PEG nécessite la collaboration d'un chirurgien, d'un gastro- entérologue et d'un anesthésiste, tous trois spécialisés en pédiatrie. La partie théorique de cette thèse est consacrée à l'historique des gastrostomies et aux diverses techniques de nutrition entérale. La partie pratique de la PEG est étudiée avec ses variantes, ses indications, contre-indications et complications. Cette partie pratique est basée sur 12 ans d'expérience du Service de Chirurgie Pédiatrique du CHUV. Il s'agit d'une étude rétrospective de dossiers, associée à un questionnaire adressé aux patients en mars 2000. 55 PEG ont été posées selon la technique de Gauderer entre 1989 et 2000. Les indications sont les maladies oncologiques (13), neurologiques (13), la mucoviscidose (12), les maladies métaboliques (6) et d'autres indications variées (11). Le bénéfice nutritionnel est étudié pour chaque type d'indications par l'évolution du gain pondéral après la PEG. Les problèmes rencontrés sont principalement des complications mineures de type inflammation de l'orifice. Nous avons observé 2 complications majeures, en ce que leurs conséquences auraient pu être graves. Le respect strict des contre-indications est nécessaire : 3 cas ont été récusés pour raison de sécurité. Le reflux gastro-oesophagien reste une affection concomitante, principalement chez les patients dont la maladie de base est d'origine neurologique. La qualité de vie de l'enfant et de sa famille est investiguée par des questions précises combinées à des plages de commentaires. Nous avons ainsi évalué le degré de satisfaction des enfants et de leur entourage. En conclusion la gastrostomie endoscopique percutanée est une opération simple, rapide et sûre, susceptible d'apporter un gain pondéral. Son utilisation pourrait être plus répandue. Elle apporte aussi une meilleure qualité de vie aux enfants qui en bénéficient, avec une amélioration de leurs performances et une diminution des conflits associés à des repas laborieux