Peace: Pulsar Evaluation Algorithm For Candidate Extraction – A Software Package For Post-Analysis Processing Of Pulsar Survey Candidates

Modern radio pulsar surveys produce a large volume of prospective candidates, the majority of which are polluted by human-created radio frequency interference or other forms of noise. Typically, large numbers of candidates need to be visually inspected in order to determine if they are real pulsars. This process can be labour intensive. In this paper, we introduce an algorithm called Pulsar Evaluation Algorithm for Candidate Extraction

A large-scale R-matrix calculation for electron-impact excitation of the Ne2+^{2+} O-like ion

The five J$\Pi$ levels within a $np^2$ or $np^4$ ground state complex provide an excellent testing ground for the comparison of theoretical line ratios with astrophysically observed values, in addition to providing valuable electron temperature and density diagnostics. The low temperature nature of the line ratios ensure that the theoretically derived values are sensitive to the underlying atomic structure and electron-impact excitation rates. Previous R-matrix calculations for the Ne$^{2+}$ O-like ion exhibit large spurious structure in the cross sections at higher electron energies, which may affect Maxwellian averaged rates even at low temperatures. Furthermore, there is an absence of comprehensive excitation data between the excited states that may provide newer diagnostics to compliment the more established lines discussed in this paper. To resolve these issues, we present both a small scale 56-level Breit-Pauli (BP) calculation and a large-scale 554 levels R-matrix Intermediate Coupling Frame Transformation (ICFT) calculation that extends the scope and validity of earlier JAJOM calculations both in terms of the atomic structure and scattering cross sections. Our results provide a comprehensive electron-impact excitation data set for all transitions to higher $n$ shells. The fundamental atomic data for this O-like ion is subsequently used within a collisional radiative framework to provide the line ratios across a range of electron temperatures and densities of interest in astrophysical observations.Comment: 17 pages, 8 figure

Characterization and sequence analysis of the lsg (LOS synthesis genes) locus from Haemophilus influenzae type b

Analysis of the lsg (LOS synthesis genes) cluster in Escherichia coli strain K12 and mutations in the lsg locus in Haemophilus influenzae type b indicated the presence of 3 regions responsible for sequential modifications of E. coli lipopolysaccharide (LPS). Sequencing of the lsg region yielded 7,435 bp that encompassed 7 complete and 1 partial open reading frames (ORFs 1-8). The predicted product of ORF1 had homology to the consensus sequence of cytochrome b proteins (21% identity, 51% similarity) and to other transmembrane proteins. The products of ORF5 and ORF6 share overall 23% identity and 49% similarity with each other. The ORF6 protein had high homology with the product of ORF275 of the E. coli rfb gene cluster (40% identity, 58% similarity), whose function is not known. Multiple sequence alignment of the ORF5 and ORF6 proteins with the RfbB, RfbJ and RfbX proteins revealed conserved motifs over the N-terminal half region of all these proteins. The products of ORF7 and ORF8 are homologous with Azotobacter vinelandii MolA protein (30% identity, 51% similarity) and MolB protein (26% identity, 48% similarity), respectively. The promoter regions of ORF1, 7 and 8 were determined by primer extension analysis and found to be similar to bacterial σ70-dependent promoters. ORF7 and ORF8 are transcribed into diverse orientation. At least 5 of the encoded proteins have been identified using coupled E. coli transcription/translation system and labeling with [35S]-methionine. We conclude that the genetic organization of the lsg biosynthesis pathway involves multiple operons that lead to the assembly of an H. influenzae LOS structure.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/67077/2/10.1177_096805199400100305.pd

Gravitational wave astronomy with the SKA

On a time scale of years to decades, gravitational wave (GW) astronomy will become a reality. Low frequency (nanoHz) GWs are detectable through long-term timing observations of the most stable pulsars. Radio observatories worldwide are currently carrying out observing programmes to detect GWs, with data sets being shared through the International Pulsar Timing Array project. One of the most likely sources of low frequency GWs are supermassive black hole binaries (SMBHBs), detectable as a background due to a large number of binaries, or as continuous or burst emission from individual sources. No GW signal has yet been detected, but stringent constraints are already being placed on galaxy evolution models. The SKA will bring this research to fruition. In this chapter, we describe how timing observations using SKA1 will contribute to detecting GWs, or can confirm a detection if a first signal already has been identified when SKA1 commences observations. We describe how SKA observations will identify the source(s) of a GW signal, search for anisotropies in the background, improve models of galaxy evolution, test theories of gravity, and characterise the early inspiral phase of a SMBHB system. We describe the impact of the large number of millisecond pulsars to be discovered by the SKA; and the observing cadence, observation durations, and instrumentation required to reach the necessary sensitivity. We describe the noise processes that will influence the achievable precision with the SKA. We assume a long-term timing programme using the SKA1-MID array and consider the implications of modifications to the current design. We describe the possible benefits from observations using SKA1-LOW. Finally, we describe GW detection prospects with SKA1 and SKA2, and end with a description of the expectations of GW astronomy.Comment: 19 pages, 3 figures, to be published in: "Advancing Astrophysics with the Square Kilometre Array", Proceedings of Science, PoS(AASKA14)03

The Baryonic Halos of Elliptical Galaxies: Radial Distribution of Globular Clusters and Diffuse Hot Gas

For a sample of 9 well-studied giant ellipticals we compare the projected radial distribution of their red and blue globular cluster (GC) subpopulations with their host galaxy stellar and X-ray surface brightness profiles. We support previous findings that the surface density distribution of red (metal-rich) GCs follows that of the host galaxy starlight. We find good agreement between the outer slope of the blue GC surface density and that of the galaxy X-ray emission. This coincidence of projected radial profiles is likely due to the fact that both blue GCs and X-ray emitting hot gas share the same gravitational potential in equilibrium. When deprojected the X-ray emitting hot gas has a radial density dependence that is the square root of that for the GC density. We further show that the energy per unit mass for blue GCs is roughly half that of the hot gas.Comment: 11 pages, 5 figures, accepted for publication in MNRA

The shape of a moving fluxon in stacked Josephson junctions

We study numerically and analytically the shape of a single fluxon moving in a double stacked Josephson junctions (SJJ's) for various junction parameters. We show that the fluxon in a double SJJ's consists of two components, which are characterized by different Swihart velocities and Josephson penetration depths. The weight coefficients of the two components depend on the parameters of the junctions and the velocity of the fluxon. It is shown that the fluxon in SJJ's may have an unusual shape with an inverted magnetic field in the second junction when the velocity of the fluxon is approaching the lower Swihart velocity. Finally, we study the influence of fluxon shape on flux-flow current-voltage characteristics and analyze the spectrum of Cherenkov radiation for fluxon velocity above the lower Swihart velocity. Analytic expression for the wavelength of Cherenkov radiation is derived.Comment: 12 pages, 12 figure

Rotation of the pre-stellar core L1689B

The search for the onset of star formation in pre-stellar cores has focussed on the identification of an infall signature in the molecular line profiles of tracer species. The classic infall signature is a double peaked line profile with an asymmetry in the strength of the peaks such that the blue peak is stronger. L1689B is a pre-stellar core and infall candidate but new JCMT HCO+ line profile data, presented here, confirms that both blue and red asymmetric line profiles are present in this source. Moreover, a dividing line can be drawn between the locations where each type of profile is found. It is argued that it is unlikely that the line profiles can be interpreted with simple models of infall or outflow and that rotation of the inner regions is the most likely explanation. A rotational model is developed in detail with a new 3D molecular line transport code and it is found that the best type of model is one in which the rotational velocity profile is in between solid body and Keplerian. It is firstly shown that red and blue asymmetric line profiles can be generated with a rotation model entirely in the absence of any infall motion. The model is then quantitively compared with the JCMT data and an iteration over a range of parameters is performed to minmize the difference between the data and model. The results indicate that rotation can dominate the line profile shape even before the onset of infall.Comment: Accepted by MNRAS, 7 pages, 4 figure

An annular gap acceleration model for γ\gamma-ray emission of pulsars

If the binding energy of the pulsar's surface is not so high (the case of a neutron star), both the negative and positive charges will flow out freely from the surface of the star. The annular free flow model for $\gamma$-ray emission of pulsars is suggested in this paper. It is emphasized that: (1). Two kinds of acceleration regions (annular and core) need to be taken into account. The annular acceleration region is defined by the magnetic field lines that cross the null charge surface within the light cylinder. (2). If the potential drop in the annular region of a pulsar is high enough (normally the cases of young pulsars), charges in both the annular and the core regions could be accelerated and produce primary gamma-rays. Secondary pairs are generated in both regions and stream outwards to power the broadband radiations. (3). The potential drop in the annular region grows more rapidly than that in the core region. The annular acceleration process is a key point to produce wide emission beams as observed. (4). The advantages of both the polar cap and outer gap models are retained in this model. The geometric properties of the $\gamma$-ray emission from the annular flow is analogous to that presented in a previous work by Qiao et al., which match the observations well. (5). Since charges with different signs leave the pulsar through the annular and the core regions, respectively, the current closure problem can be partially solved.Comment: 11 pages 2 figures, accepted by Chinese Journal of Astronomy and Astrophysic

A transient component in the pulse profile of PSR J0738-4042

One of the tenets of the radio pulsar observational picture is that the integrated pulse profiles are constant with time. This assumption underpins much of the fantastic science made possible via pulsar timing. Over the past few years, however, this assumption has come under question with a number of pulsars showing pulse shape changes on a range of timescales. Here, we show the dramatic appearance of a bright component in the pulse profile of PSR J0738-4042 (B0736-40). The component arises on the leading edge of the profile. It was not present in 2004 but strongly present in 2006 and all observations thereafter. A subsequent search through the literature shows the additional component varies in flux density over timescales of decades. We show that the polarization properties of the transient component are consistent with the picture of competing orthogonal polarization modes. Faced with the general problem of identifying and characterising average profile changes, we outline and apply a statistical technique based on a Hidden Markov Model. The value of this technique is established through simulations, and is shown to work successfully in the case of low signal-to-noise profiles.Comment: Accepted for publication in MNRA

The soft X-ray absorption lines of the Seyfert 1 galaxy MCG--6-30-15

The absorption lines in the soft X-ray spectrum of MCG--6-30-15 are studied using the Reflection Grating Spectrometer data from the 2001 XMM-Newton 320 ks observation. A line search of the full time-averaged spectrum reveals 51 absorption lines and one emission line. The equivalent widths of the lines are measured and the majority of the lines identified. We find lines produced by a broad range of charge states for several elements, including almost all the charge states oxygen and iron, suggesting a broad range of ionization parameters is present in the warm absorber. The equivalent widths of the lines are broadly consistent with the best fitting warm absorber models from Turner et al (2003). The equivalent widths of the absorption lines allow confidence limits on the column density of the species to be determined. For OVII a column density of 10^18.36-10^18.86 cm^-2 is found. This column density of OVII, when combined with the inferred FeI absorption, is sufficient to explain the drop in flux at 0.7 keV as being due to absorption from the warm absorber. Fitting OI K-edge absorption to the spectrum reveals a column of 10^17.51-10^17.67 cm^-2 of OI, suggesting an Fe:O ratio of ~1:2, consistent with the neutral iron being in the form of iron oxide dust. Variability is seen in a few absorption lines, but the majority of the absorption features, including the prominent absorption edges, stay constant throughout the observation despite variability in the continuum flux.Comment: Accepted for publication in MNRAS, 11 pages, 7 figure