Neutral networks of genotypes: Evolution behind the curtain

Our understanding of the evolutionary process has gone a long way since the publication, 150 years ago, of "On the origin of species" by Charles R. Darwin. The XXth Century witnessed great efforts to embrace replication, mutation, and selection within the framework of a formal theory, able eventually to predict the dynamics and fate of evolving populations. However, a large body of empirical evidence collected over the last decades strongly suggests that some of the assumptions of those classical models necessitate a deep revision. The viability of organisms is not dependent on a unique and optimal genotype. The discovery of huge sets of genotypes (or neutral networks) yielding the same phenotype --in the last term the same organism--, reveals that, most likely, very different functional solutions can be found, accessed and fixed in a population through a low-cost exploration of the space of genomes. The 'evolution behind the curtain' may be the answer to some of the current puzzles that evolutionary theory faces, like the fast speciation process that is observed in the fossil record after very long stasis periods.Comment: 7 pages, 7 color figures, uses a modification of pnastwo.cls called pnastwo-modified.cls (included

Stochastic multiplicative processes with reset events

We study a stochastic multiplicative process with reset events. It is shown that the model develops a stationary power-law probability distribution for the relevant variable, whose exponent depends on the model parameters. Two qualitatively different regimes are observed, corresponding to intermittent and regular behaviour. In the boundary between them, the mean value of the relevant variable is time-independent, and the exponent of the stationary distribution equals -2. The addition of diffusion to the system modifies in a non-trivial way the profile of the stationary distribution. Numerical and analytical results are presented.Comment: 8 pages, 3 figures. To appear in Phys. Rev.

Demography-based adaptive network model reproduces the spatial organization of human linguistic groups

The distribution of human linguistic groups presents a number of interesting and non-trivial patterns. The distributions of the number of speakers per language and the area each group covers follow log-normal distributions, while population and area fulfill an allometric relationship. The topology of networks of spatial contacts between different linguistic groups has been recently characterized, showing atypical properties of the degree distribution and clustering, among others. Human demography, spatial conflicts, and the construction of networks of contacts between linguistic groups are mutually dependent processes. Here we introduce an adaptive network model that takes all of them into account and successfully reproduces, using only four model parameters, not only those features of linguistic groups already described in the literature, but also correlations between demographic and topological properties uncovered in this work. Besides their relevance when modeling and understanding processes related to human biogeography, our adaptive network model admits a number of generalizations that broaden its scope and make it suitable to represent interactions between agents based on population dynamics and competition for space

Small-world behavior in a system of mobile elements

We analyze the propagation of activity in a system of mobile automata. A number r L^d of elements move as random walkers on a lattice of dimension d, while with a small probability p they can jump to any empty site in the system. We show that this system behaves as a Dynamic Small-World (DSW) and present analytic and numerical results for several quantities. Our analysis shows that the persistence time T* (equivalent to the persistence size L* of small-world networks) scales as T* ~ (r p)^(-t), with t = 1/(d+1).Comment: To appear in Europhysics Letter

Biodiversity in model ecosystems, II: Species assembly and food web structure

This is the second of two papers dedicated to the relationship between population models of competition and biodiversity. Here we consider species assembly models where the population dynamics is kept far from fixed points through the continuous introduction of new species, and generalize to such models thecoexistence condition derived for systems at the fixed point. The ecological overlap between species with shared preys, that we define here, provides a quantitative measure of the effective interspecies competition and of the trophic network topology. We obtain distributions of the overlap from simulations of a new model based both on immigration and speciation, and show that they are in good agreement with those measured for three large natural food webs. As discussed in the first paper, rapid environmental fluctuations, interacting with the condition for coexistence of competing species, limit the maximal biodiversity that a trophic level can host. This horizontal limitation to biodiversity is here combined with either dissipation of energy or growth of fluctuations, which in our model limit the length of food webs in the vertical direction. These ingredients yield an effective model of food webs that produce a biodiversity profile with a maximum at an intermediate trophic level, in agreement with field studies