27 research outputs found

    Post-Earthquake Assessment and Numerical Modeling of Freestanding Heritage Structures

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    Historic and heritage structures are particularly vulnerable to earthquakes, where damage or collapse can not only lead to loss of a structure but also the loss of irreplaceable heritage. Many heritage structures can be classified as freestanding (detached) structures, including unreinforced masonry walls, classical multi-drum columns, and statue-pedestal systems. However, the seismic response of freestanding structures (sliding, rocking, rock-slide, overturning) is poorly predicted by existing methods due to geometric non-linearities as well as sensitivity to interface conditions and modeling parameters. Previous studies have focused on analytical modeling of simplified systems and/or experimentation under controlled laboratory conditions. In contrast, this paper presents the post-earthquake assessment of multiple statue-pedestal systems following the 2014 South Napa earthquake. The objective is to examine the seismic response of these complex freestanding structural systems, under real-world conditions, to elucidate key characteristics of the response and evaluate the influence of both physical and modeling parameters. In this study, the responses of the selected statues from the Napa area are numerically simulated under original ground motion records. The complex geometries of the statues are represented using meshes generated from lidar-based point clouds obtained during post-earthquake reconnaissance. The responses of the statues are simulated using the Distinct Element Method (DEM) where the statue and pedestal have been modeled as rigid blocks with deformation concentrated at the joints (i.e. interface of statue and pedestal or pedestal and ground). The study analyzes the results of the numerical simulations in comparison to the observed physical response during the earthquake event. Results emphasize the significant impact of ground motion parameters (e.g. directionality), the presence of soil, and modeling parameters such as contact stiffness

    A Mathematical Study on “Additive Technique” Versus “Branch and Bound Technique” for Solving Binary Programming Problem

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    A solid body needs adequate supplements from nourishment that we eat each day. Eating pretty much than what our body needs will prompt lack of healthy sustenance (under-nourishment and over-nourishment).In Malaysia, a few reviews have been directed to examine the wholesome status of Malaysians, particularly among youngsters and youths.However there are different methods for taking care of the menu arranging issue and in this paper Binary Programming (BP) is executed. Separately, "Additive Technique (AT)" and "Branch and Bound Technique (BBT)" are utilized as a part of BP.Both methodologies utilize diverse systems and might yield distinctive ideal arrangements. Along these lines, this study expects to build up a scientific model for eating regimen arranging that meets the essential supplement admission and look at the outcomes yield through additive substance and branch and bound methodologies. The information was gathered from different all inclusive schools and furthermore from the Ministry of Education. The model was illuminated by utilizing the Balas Algorithm through AT and Binary Programming through BBT. © 2018 Institute of Physics Publishing. All rights reserved

    Exploring and Expanding the Fatty-Acid-Binding Protein Superfamily in Fasciola Species

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    The liver flukes Fasciola hepatica and F. gigantica infect livestock worldwide and threaten food security with climate change and problematic control measures spreading disease. Fascioliasis is also a food borne disease with up to 17 million humans infected. In the absence of vaccines, treatment depends on Triclabendazole (TCBZ) and over-use has led to widespread resistance, compromising future TCBZ control. Reductionist biology from many laboratories has predicted new therapeutic targets. To this end, the fatty acid binding protein (FABP) superfamily have proposed multi-functional roles, including functions intersecting vaccine and drug therapy, such as immune modulation and anthelmintic sequestration. Research is hindered by a lack of understanding of the full FABP superfamily complement. Although discovery studies predicted FABPs as promising vaccine candidates, it is unclear if uncharacterised FABPs are more relevant for vaccine formulations. We have coupled genome, transcriptome and EST data mining with proteomics and phylogenetics, to reveal a liver fluke FABP superfamily of 7 clades: previously identified clades I-III and newly identified clades IV-VII. All new clade FABPs were analysed using bioinformatics and cloned from both liver flukes. The extended FABP dataset will provide new study tools to research the role of FABPs in parasite biology and as therapy targets

    RNAi dynamics in juvenile Fasciola spp. liver flukes reveals the persistence of gene silencing in vitro

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    Fasciola spp. liver fluke cause pernicious disease in humans and animals. Whilst current control is unsustainable due to anthelmintic resistance, gene silencing (RNA interference, RNAi) has the potential to contribute to functional validation of new therapeutic targets. The susceptibility of juvenile Fasciola hepatica to double stranded (ds)RNA-induced RNAi has been reported. To exploit this we probe RNAi dynamics, penetrance and persistence with the aim of building a robust platform for reverse genetics in liver fluke. We describe development of standardised RNAi protocols for a commercially-available liver fluke strain (the US Pacific North West Wild Strain), validated via robust transcriptional silencing of seven virulence genes, with in-depth experimental optimisation of three: cathepsin L (FheCatL) and B (FheCatB) cysteine proteases, and a σ-class glutathione transferase (FheσGST).Robust transcriptional silencing of targets in both F. hepatica and Fasciola gigantica juveniles is achievable following exposure to long (200-320 nt) dsRNAs or 27 nt short interfering (si)RNAs. Although juveniles are highly RNAi-susceptible, they display slower transcript and protein knockdown dynamics than those reported previously. Knockdown was detectable following as little as 4h exposure to trigger (target-dependent) and in all cases silencing persisted for ≥25 days following long dsRNA exposure. Combinatorial silencing of three targets by mixing multiple long dsRNAs was similarly efficient. Despite profound transcriptional suppression, we found a significant time-lag before the occurrence of protein suppression; FheσGST and FheCatL protein suppression were only detectable after 9 and 21 days, respectively.In spite of marked variation in knockdown dynamics, we find that a transient exposure to long dsRNA or siRNA triggers robust RNAi penetrance and persistence in liver fluke NEJs supporting the development of multiple-throughput phenotypic screens for control target validation. RNAi persistence in fluke encourages in vivo studies on gene function using worms exposed to RNAi-triggers prior to infection

    Proteomics and in silico approaches to extend understanding of the glutathione transferase superfamily of the tropical liver fluke Fasciola gigantica

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    Fasciolosis is an important foodborne, zoonotic disease of livestock and humans, with global annual health and economic losses estimated at several billion US$. Fasciola hepatica is the major species in temperate regions, while F. gigantica dominates in the tropics. In the absence of commercially available vaccines to control fasciolosis, increasing reports of resistance to current chemotherapeutic strategies and the spread of fasciolosis into new areas, new functional genomics approaches are being used to identify potential new drug targets and vaccine candidates. The glutathione transferase (GST) superfamily is both a candidate drug and vaccine target. This study reports the identification of a putatively novel Sigma class GST, present in a water-soluble cytosol extract from the tropical liver fluke F. gigantica. The GST was cloned and expressed as an enzymically active recombinant protein. This GST shares a greater identity with the human schistosomiasis GST vaccine currently at Phase II clinical trials than previously discovered F. gigantica GSTs, stimulating interest in its immuno-protective properties. In addition, in silico analysis of the GST superfamily of both F. gigantica and F. hepatica has revealed an additional Mu class GST, Omega class GSTs, and for the first time, a Zeta class member

    Post-Earthquake Assessment and Numerical Modeling of Freestanding Heritage Structures

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    Historic and heritage structures are particularly vulnerable to earthquakes, where damage or collapse can not only lead to loss of a structure but also the loss of irreplaceable heritage. Many heritage structures can be classified as freestanding (detached) structures, including unreinforced masonry walls, classical multi-drum columns, and statue-pedestal systems. However, the seismic response of freestanding structures (sliding, rocking, rock-slide, overturning) is poorly predicted by existing methods due to geometric non-linearities as well as sensitivity to interface conditions and modeling parameters. Previous studies have focused on analytical modeling of simplified systems and/or experimentation under controlled laboratory conditions. In contrast, this paper presents the post-earthquake assessment of multiple statue-pedestal systems following the 2014 South Napa earthquake. The objective is to examine the seismic response of these complex freestanding structural systems, under real-world conditions, to elucidate key characteristics of the response and evaluate the influence of both physical and modeling parameters. In this study, the responses of the selected statues from the Napa area are numerically simulated under original ground motion records. The complex geometries of the statues are represented using meshes generated from lidar-based point clouds obtained during post-earthquake reconnaissance. The responses of the statues are simulated using the Distinct Element Method (DEM) where the statue and pedestal have been modeled as rigid blocks with deformation concentrated at the joints (i.e. interface of statue and pedestal or pedestal and ground). The study analyzes the results of the numerical simulations in comparison to the observed physical response during the earthquake event. Results emphasize the significant impact of ground motion parameters (e.g. directionality), the presence of soil, and modeling parameters such as contact stiffness

    Uncertainty in overturning of precariously balanced rocks due to basal contact

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    Precariously balanced rocks (PBRs) are a type of naturally occurring freestanding structure that provides valuable information to constrain seismic hazard at return periods which are important for critical facilities such as nuclear power plants and nuclear repositories. Exposure ages have been established to be in excess of 10,000–30,000 years, which is why precarious rocks are one of the only available means to validate seismic hazard associated with long return periods. One critical component for constraining seismic hazard in this way is the overturning estimate of a given precarious rock as a function of earthquake intensity. However, current state-of-the-art methods for modeling the seismic response of precarious rocks involve significant sources of uncertainty. One of the main sources of uncertainty stems from the interface of the rock, which is usually occluded during surveying and assumed during modeling. Through extensive shake table testing, this study analyzes the uncertainty in the overturning response of a granite precarious rock specimen incorporating various degrees of interface contact. The results indicate that a small variation in the contact geometry could result in a substantial increase in the stability of the specimen, which is significant given the difficulty of surveying the interface of PBRs in the field. Repeatability tests indicate that the overturning demand can vary up to nearly ±50%. The probabilistic overturning responses are compared across the interface changes to bound uncertainty; and, the effect of modeling parameters, namely the contact normal stiffness, is evaluated through a parametric study and comparison with experimental results

    Long-term outcomes of transcutaneous retrobulbar amphotericin B in COVID-19-associated mucormycosis

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    Purpose: To describe the long-term outcomes of transcutaneous retrobulbar amphotericin B (TRAMB) in COVID-19-associated mucormycosis. Methods: In total, 18 cases of COVID-19-associated mucormycosis were reviewed. In addition to the recommended treatment protocol, all patients were to be given 3.5 mg/ml/day of TRAMB for five days. Results: Of the 18 patients, 2 presented with stage 3a disease, 13 had stage 3c disease, and 3 patients had central nervous system (CNS) involvement (stage 4a and 4c). In addition to planned retrobulbar doses, five patients were given more while two patients received fewer injections (i.e., <5). At the last mean follow-up of 34.67 (±8.88) weeks, 11 patients were in radiological regression and 4 had stable disease while 2 patients had to undergo exenteration; one mortality was observed because of disease progression. Clinical regression in terms of visual and ptosis improvement was seen in seven and nine patients, respectively. Conclusion: Rhino-orbito-cerebral mucormycosis is a serious condition which warrants an aggressive treatment strategy. In unprecedented situations witnessed recently, TRAMB turned out to be an effective and economical alternative. Though large randomized studies are needed to establish its efficacy, TRAMB still manages to halt progression and salvage the globe in significant number of patients, and hence its use should be encouraged on a case-to-case basis especially in developing countries with limited resources

    Multivariate analysis of effective dose and size-specific dose estimates for thorax and abdominal computed tomography

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    The study aimed to compute the effective dose (E) and size-specific dose estimate (SSDE) of routine adult patients undergoing thorax and abdominal computed tomography (CT) imaging and to present their multivariate analysis. All adult thorax and abdominal CT examinations conducted from March 2022 to June 2022 were prospectively included in this study. The Water Equivalent Diameter (Dw) and SSDE of all the examinations were computed from CT dose index volume (CTDIvol) and Dose length product (DLP) displayed on the dose report in the CT console. The multivariate statistical analysis was performed to investigate the correlation of SSDE and E on CTDIvol, Dw area of the region of interest (ROI) (AreaROI), body mass index (BMI), conversion factor (fsize) and hounsfield (HUmean) number in the ROI at 95% level of significance (P < 0.05). The linear regression analysis was performed to investigate the dependence of SSDE and E on other parameters for both abdominal and thorax patients. A total number of 135 (Abdomen = 61 and Thorax = 74) measurements were performed. The mean value of effective dose for abdomen and thorax patients was found to be 7.17 ± 3.94 and 4.89 ± 2.16 mSv, respectively. The SSDE was observed to be 13.24 ± 3.61 and 13.04 ± 3.61 mGy for thorax and abdomen respectively. The multivariate analysis suggests that SSDE for abdominal CT is found significantly dependent on CTDIvol, Dw and fsize with P < 0.05 and E is found to be significantly dependent on DLP, AreaROI, Dw and fsize at 95% level of confidence for abdominal CT imaging. SSDE for thorax CT was found significantly dependent on BMI, CTDIvol, HUmean, Dw and fsize at 95% level of confidence. Furthermore, E was observed dependent on DLP at P < 0.05. The linear regression analysis also shows that E is strongly correlated with DLP (r = 1.0) for both thorax and abdominal CT, further the SSDE was observed strongly correlated with CTDIvol with r = 0.79 and r = 0.86 for abdomen and thorax CT respectively. A strong correlation was observed between BMI and for Dw abdominal CT imaging (r = 0.68). The mean value of SSDE for thorax is slightly greater than abdomen. The average value of effective dose for abdomen and thorax measurements was found to be 7.17 ± 3.94 and 4.89 ± 2.16 mSv and , correspondingly. SSDE for both abdomen and thorax CT is significantly dependent on CTDIvol, Dw and fsize at 95% level of confidence. The strong correlation was also observed E on DLP and SSDE on CTDIvol for both Abdomen and Thorax CT. The strong dependence of Dw on BMI (r = 0.68) is due to the excessive fat concentration around the stomach and abdomen
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