Software for cut-generating functions in the Gomory--Johnson model and beyond

We present software for investigations with cut generating functions in the Gomory-Johnson model and extensions, implemented in the computer algebra system SageMath.Comment: 8 pages, 3 figures; to appear in Proc. International Congress on Mathematical Software 201

Duration of untreated psychosis and social function: 1-year follow-up study of first-episode schizophrenia.

BACKGROUND: In first-episode schizophrenia, longer duration of untreated psychosis (DUP) predicts poorer outcomes. AIMS: To address whether the relationship between DUP and outcome is a direct causal one or the result of association between symptoms and/or cognitive functioning and social functioning at the same time point. METHOD: Symptoms, social function and cognitive function were assessed in 98 patients with first-episode schizphrenia at presentation and 1 year later. RESULTS: There was no significant clinical difference between participants with short and long DUP at presentation. Linear regression analyses revealed that longer DUP significantly predicted more severe positive and negative symptoms and poorer social function at 1 year, independent of scores at presentation. Path analyses revealed independent direct relationships between DUP and social function, core negative symptoms and positive symptoms. There was no significant association between DUP and cognition. CONCLUSIONS: Longer DUP predicts poor social function independently of symptoms. The findings underline the importance of taking account of the phenomenological overlap between measures of negative symptoms and social function when investigating the effects of DUP

Co-constructing a new framework for evaluating social innovation in marginalized rural areas

The EU funded H2020 project \u2018Social Innovation in Marginalised Rural Areas\u2019 (SIMRA; www.simra-h2020.eu) has the overall objective of advancing the state-of-the-art in social innovation. This paper outlines the process for co- developing an evaluation framework with stakeholders, drawn from across Europe and the Mediterranean area, in the fields of agriculture, forestry and rural development. Preliminary results show the importance of integrating process and outcome-oriented evaluations, and implementing participatory approaches in evaluation practice. They also raise critical issues related to the comparability of primary data in diverse regional contexts and highlight the need for mixed methods approaches in evaluation

The androgen receptor and signal-transduction pathways in hormone-refractory prostate cancer. Part 1: modifications to the androgen receptor

Prostate cancer is the second most common male malignancy in the western world an increasing incidence in an ageing population. Treatment of advanced prostate cancer relies on androgen deprivation. Although the majority of patients initially respond favourably to androgen deprivation therapy, the mean time to relapse is 12-18 months. Currently there are few treatments available for men who have developed resistance to hormone therapy, due to the lack of understanding of the molecular mechanisms underlying development of this disease. Recently, however, major advances have been made in understanding both androgen receptor (AR) dependent and independent pathways which promote development of hormone resistant prostate cancer. This review will focus on modifications to the AR and associated pathways. Molecular modifications to the androgen receptor itself, e.g. mutations and/or amplification, although involved in the development of hormone resistance cannot explain all cases. Phosphorylation of AR, via either Ras/MAP kinase or PI3K/Akt signal transduction pathways, have been shown to activate AR in both a ligand (androgen) dependent and independent fashion. During this review we will discuss the clinical evidence to support AR dependent pathways as mediators of hormone resistance

On the Computational Complexity of Non-dictatorial Aggregation

We investigate when non-dictatorial aggregation is possible from an algorithmic perspective, where non-dictatorial aggregation means that the votes cast by the members of a society can be aggregated in such a way that the collective outcome is not simply the choices made by a single member of the society. We consider the setting in which the members of a society take a position on a fixed collection of issues, where for each issue several different alternatives are possible, but the combination of choices must belong to a given set $X$ of allowable voting patterns. Such a set $X$ is called a possibility domain if there is an aggregator that is non-dictatorial, operates separately on each issue, and returns values among those cast by the society on each issue. We design a polynomial-time algorithm that decides, given a set $X$ of voting patterns, whether or not $X$ is a possibility domain. Furthermore, if $X$ is a possibility domain, then the algorithm constructs in polynomial time such a non-dictatorial aggregator for $X$. We then show that the question of whether a Boolean domain $X$ is a possibility domain is in NLOGSPACE. We also design a polynomial-time algorithm that decides whether $X$ is a uniform possibility domain, that is, whether $X$ admits an aggregator that is non-dictatorial even when restricted to any two positions for each issue. As in the case of possibility domains, the algorithm also constructs in polynomial time a uniform non-dictatorial aggregator, if one exists. Then, we turn our attention to the case where $X$ is given implicitly, either as the set of assignments satisfying a propositional formula, or as a set of consistent evaluations of an sequence of propositional formulas. In both cases, we provide bounds to the complexity of deciding if $X$ is a (uniform) possibility domain.Comment: 21 page

The estrogenic activity of phthalate esters in vitro

A large number of phthalate esters were screened for estrogenic activity using a recombinant yeast screen. a selection of these was also tested for mitogenic effect on estrogen-responsive human breast cancer cells. A small number of the commercially available phthalates tested showed extremely weak estrogenic activity. The relative potencies of these descended in the order butyl benzyl phthalate (BBP) > dibutyl phthalate (DBP) > diisobutyl phthalate (DIBP) > diethyl phthalate (DEP) > diisiononyl phthalate (DINP). Potencies ranged from approximately 1 x 10(6) to 5 x 10(7) times less than 17beta-estradiol. The phthalates that were estrogenic in the yeast screen were also mitogenic on the human breast cancer cells. Di(2-ethylhexyl) phthalate (DEHP) showed no estrogenic activity in these in vitro assays. A number of metabolites were tested, including mono-butyl phthalate, mono-benzyl phthalate, mono-ethylhexyl phthalate, mon-n-octyl phthalate; all were wound to be inactive. One of the phthalates, ditridecyl phthalate (DTDP), produced inconsistent results; one sample was weakly estrogenic, whereas another, obtained from a different source, was inactive. analysis by gel chromatography-mass spectometry showed that the preparation exhibiting estrogenic activity contained 0.5% of the ortho-isomer of bisphenol A. It is likely that the presence of this antioxidant in the phthalate standard was responsible for the generation of a dose-response curve--which was not observed with an alternative sample that had not been supplemented with o,p'-bisphenol A--in the yeast screen; hence, DTDP is probably not weakly estrogenic. The activities of simple mixtures of BBP, DBP, and 17beta-estradiol were assessed in the yeast screen. No synergism was observed, although the activities of the mixtures were approximately additive. In summary, a small number of phthalates are weakly estrogenic in vitro. No data has yet been published on whether these are also estrogenic in vitro. No data has yet been published on whether these are also estrogenic in vivo; this will require tests using different classes of vertebrates and different routes of exposure

Vertical distribution and trophic structure of the macrozooplankton in a shallow temperate estuary (Ria de Aveiro, Portugal)

The zooplankton of the lower part of Canal de Mira (Ria de Aveiro) was sampled during one lunar month. The sampling programme consisted of nine 25 hour fixed-cycles, separated weekly. In each cycle, samples were collected every two hours at three depths (surface, mid-water and above the bottom) with a 500 µm mesh net. The overall effect of the tidal phase was analyzed, taking into account the day and depth of the vertical position of the organisms through a 3-way analysis of variance (ANOVA). The zooplankton densities were, in general, higher at the surface during the night and near the bottom during the day, mainly at spring tide. The variation in the number of species followed a similar pattern to that observed for abundance. Significant differences (p<0.01) between diel and tidal phases were observed. Interaction between phase of the day and depth was also significant (p<0.05), with higher organism densities observed during night periods near the bottom. From a trophic point of view the zooplankton community of Canal de Mira was mainly composed of carnivorous and omnivorous species. Carnivores were significantly more abundant around the new and full moon (p<0.001), the omnivores at the new moon (p<0.001) and the herbivores and detritivores at the first quarter of the moon cycles (p<0.001). The density of carnivores was significantly higher at the surface at night and near the bottom during the day (p<0.05). Significant differences in the abundance of omnivores were observed between phases of the day and between depths, with higher values near the bottom during the day. The herbivores and detritivores had significantly higher densities during flood tides (p<0.001).DISTIBUICIÓN VERTICAL Y ESTRUCTURA TRÓFICA DEL MACROZOOPLANCTON EN UN ESTUARIO TEMPLADO (RIA DE AVEIRO). – El zooplancton de la parte inferior del Canal de Mira (Ria de Aveiro) fue muestreado durante un mes lunar. El programa de muestreo consistió en nueve ciclos de 25 horas, con periodicidad semanal. En cada ciclo, las muestras fueron recogidas cada dos horas, a tres profundidades (superficie, columna de agua y sobre el fondo) con una red de 500 µm. El efecto total de la fase de la marea fue analizado, teniendo en consideración el día y la profundidad en la posición vertical de los organismos con un análisis 3-Way ANOVA. Las densidades del zooplancton fueron en general más altas en la superficie durante la noche y cercanas al fondo durante el día, principalmente em la marea viva. La variación en el número de especies siguió un patrón similar al observado para la abundancia. Se observaron diferencias significativas (p<0.01) entre las fases del día y las fases de marea. La interacción entre la fase del día y la profundidad fue también significativa (p<0.05) con densidades de organismos más altas durante los periodos nocturnos en el fondo. De un punto de vista trófico, la comunidad zooplanctónica del Canal de Mira está principalmente compuesta por especies carnívoras y omnívoras. Los carnívoros fueram significativamente más abundantes cerca de la luna nueva y de la luna llena (p<0.001), los omnívoros en la luna nueva (p<0.001) y los herbívoros e detritívoros en el primero cuarto de los ciclos de la luna (p<0.001). La densidad de los carní- voros fue significativamente más alta en la superficie durante la noche y en el fondo durante el día (p<0.05). Para los omní- voros, fueron observadas diferencias significativas entre las fases del día y la profundidad, registando valores más elevados en el fondo durante el día. Los herbívoros y los detritívoros presentaron densidades significativamente superiores durante los ciclos de marea (p<0.001)

On finitely ambiguous B\"uchi automata

Unambiguous B\"uchi automata, i.e. B\"uchi automata allowing only one accepting run per word, are a useful restriction of B\"uchi automata that is well-suited for probabilistic model-checking. In this paper we propose a more permissive variant, namely finitely ambiguous B\"uchi automata, a generalisation where each word has at most $k$ accepting runs, for some fixed $k$. We adapt existing notions and results concerning finite and bounded ambiguity of finite automata to the setting of $\omega$-languages and present a translation from arbitrary nondeterministic B\"uchi automata with $n$ states to finitely ambiguous automata with at most $3^n$ states and at most $n$ accepting runs per word

Metric Accuracy Evaluation of Dense Matching Algorithms in Archeological Applications

In the cultural heritage field the recording and documentation of small and medium size objects with very detailed Digital Surface Models (DSM) is readily possible by through the use of high resolution and high precision triangulation laser scanners. 3D surface recording of archaeological objects can be easily achieved in museums; however, this type of record can be quite expensive. In many cases photogrammetry can provide a viable alternative for the generation of DSMs. The photogrammetric procedure has some benefits with respect to laser survey. The research described in this paper sets out to verify the reconstruction accuracy of DSMs of some archaeological artifacts obtained by photogrammetric survey. The experimentation has been carried out on some objects preserved in the Petrie Museum of Egyptian Archaeology at University College London (UCL). DSMs produced by two photogrammetric software packages are compared with the digital 3D model obtained by a state of the art triangulation color laser scanner. Intercomparison between the generated DSM has allowed an evaluation of metric accuracy of the photogrammetric approach applied to archaeological documentation and of precision performances of the two software packages