Cultivating Sustainable Coffee: Persistent Paradoxes

This chapter discusses the relationship and interconnections among changing the livelihoods of farmers, initiatives for sustainable coffee, and the production of shade-grown coffee. It examines the advantages and opportunities for farmers and producers engaged in coffee certification and diversification programs. The role of Fair Trade and organic networks in creating awareness of biodiversity conservation, the social and environment costs of coffee systems, and the need for supporting small farmers are also discussed. The methods to increase accountability and improve the efficiency of coffee cooperatives are presented in this chapter, as are the importance of understanding the sustainability initiatives and their implications for the regulators, along with the use of land patterns for coffee cultivation

Molecular basis of gap junctional communication in the CNS of the leech Hirudo medicinalis

Gap junctions are intercellular channels that allow the passage of ions and small molecules between cells. In the nervous system, gap junctions mediate electrical coupling between neurons. Despite sharing a common topology and similar physiology, two unrelated gap junction protein families exist in the animal kingdom. Vertebrate gap junctions are formed by members of the connexin family, whereas invertebrate gap junctions are composed of innexin proteins. Here we report the cloning of two innexins from the leech Hirudo medicinalis. These innexins show a differential expression in the leech CNS: Hm-inx1 is expressed by every neuron in the CNS but not in glia, whereas Hm-inx2 is expressed in glia but not neurons. Heterologous expression in the paired Xenopus oocyte system demonstrated that both innexins are able to form functional homotypic gap junctions. Hm-inx1 forms channels that are not strongly gated. In contrast, Hm-inx2 forms channels that are highly voltage-dependent; these channels demonstrate properties resembling those of a double rectifier. In addition, Hm-inx1 and Hm-inx2 are able to cooperate to form heterotypic gap junctions in Xenopus oocytes. The behavior of these channels is primarily that predicted from the properties of the constituent hemichannels but also demonstrates evidence of an interaction between the two. This work represents the first demonstration of a functional gap junction protein from a Lophotrochozoan animal and supports the hypothesis that connexin-based communication is restricted to the deuterostome clade

Defective Gut Function in \u3cem\u3eDrop-Dead\u3c/em\u3e Mutant \u3cem\u3eDrosophila\u3c/em\u3e

Mutation of the gene drop-dead (drd ) causes adult Drosophila to die within 2 weeks of eclosion and is associated with reduced rates of defecation and increased volumes of crop contents. In the current study, we demonstrate that flies carrying the strong allele drdlwf display a reduction in the transfer of ingested food from the crop to the midgut, as measured both as a change in the steady-state distribution of food within the gut and also in the rates of crop emptying and midgut filling following a single meal. Mutant flies have abnormal triglyceride (TG) and glycogen stores over the first 4 days post-eclosion, consistent with their inability to move food into the midgut for digestion and nutrient absorption. However, the lifespan of mutants was dependent upon food presence and quality, suggesting that at least some individual flies were able to digest some food. Finally, spontaneous motility of the crop was abnormal in drdlwf flies, with the crops of mutant flies contracting significantly more rapidly than those of heterozygous controls. We therefore hypothesize that mutation of drd causes a structural or regulatory defect that inhibits the entry of food into the midgut

Coherence-Preserving Quantum Bits

Real quantum systems couple to their environment and lose their intrinsic quantum nature through the process known as decoherence. Here we present a method for minimizing decoherence by making it energetically unfavorable. We present a Hamiltonian made up solely of two-body interactions between four two-level systems (qubits) which has a two-fold degenerate ground state. This degenerate ground state has the property that any decoherence process acting on an individual physical qubit must supply energy from the bath to the system. Quantum information can be encoded into the degeneracy of the ground state and such coherence-preserving qubits will then be robust to local decoherence at low bath temperatures. We show how this quantum information can be universally manipulated and indicate how this approach may be applied to a quantum dot quantum computer.Comment: 5 pages, 1 figur

A SAURON study of dwarf elliptical galaxies in the Virgo Cluster

Dwarf elliptical galaxies are the most common galaxy type in nearby galaxy clusters, yet they remain relatively poorly studied objects and many of their basic properties have yet to be quantified. In this contribution we present the preliminary results of a study of 4 Virgo and 1 field galaxy obtained with the SAURON integral field unit on the William Herschel Telescope (La Palma). While traditional long-slit observations are likely to miss more complicated kinematic features, with SAURON we are able to study both kinematics and stellar populations in two dimensions, obtaining a much more detailed view of the mass distribution and star formation histories.Comment: 2 pages, 1 figure; to appear in the proceedings of the conference "A Universe of dwarf galaxies" (Lyon, June 14-18, 2010

Weak Gravitational Flexion

Flexion is the significant third-order weak gravitational lensing effect responsible for the weakly skewed and arc-like appearance of lensed galaxies. Here we demonstrate how flexion measurements can be used to measure galaxy halo density profiles and large-scale structure on non-linear scales, via galaxy-galaxy lensing, dark matter mapping and cosmic flexion correlation functions. We describe the origin of gravitational flexion, and discuss its four components, two of which are first described here. We also introduce an efficient complex formalism for all orders of lensing distortion. We proceed to examine the flexion predictions for galaxy-galaxy lensing, examining isothermal sphere and Navarro, Frenk & White (NFW) profiles and both circularly symmetric and elliptical cases. We show that in combination with shear we can precisely measure galaxy masses and NFW halo concentrations. We also show how flexion measurements can be used to reconstruct mass maps in 2-D projection on the sky, and in 3-D in combination with redshift data. Finally, we examine the predictions for cosmic flexion, including convergence-flexion cross-correlations, and find that the signal is an effective probe of structure on non-linear scales.Comment: 17 pages, including 12 figures, submitted to MNRA

On SIC-POVMs in Prime Dimensions

The generalized Pauli group and its normalizer, the Clifford group, have a rich mathematical structure which is relevant to the problem of constructing symmetric informationally complete POVMs (SIC-POVMs). To date, almost every known SIC-POVM fiducial vector is an eigenstate of a "canonical" unitary in the Clifford group. I show that every canonical unitary in prime dimensions p > 3 lies in the same conjugacy class of the Clifford group and give a class representative for all such dimensions. It follows that if even one such SIC-POVM fiducial vector is an eigenvector of such a unitary, then all of them are (for a given such dimension). I also conjecture that in all dimensions d, the number of conjugacy classes is bounded above by 3 and depends only on d mod 9, and I support this claim with computer computations in all dimensions < 48.Comment: 6 pages, no figures. v3 Refs added, improved discussion of previous work. Ref to a proof of the main conjecture also adde

Few-body spin couplings and their implications for universal quantum computation

Electron spins in semiconductor quantum dots are promising candidates for the experimental realization of solid-state qubits. We analyze the dynamics of a system of three qubits arranged in a linear geometry and a system of four qubits arranged in a square geometry. Calculations are performed for several quantum dot confining potentials. In the three-qubit case, three-body effects are identified that have an important quantitative influence upon quantum computation. In the four-qubit case, the full Hamiltonian is found to include both three-body and four-body interactions that significantly influence the dynamics in physically relevant parameter regimes. We consider the implications of these results for the encoded universality paradigm applied to the four-electron qubit code; in particular, we consider what is required to circumvent the four-body effects in an encoded system (four spins per encoded qubit) by the appropriate tuning of experimental parameters.Comment: 1st version: 33 pages, 25 figures. Described at APS March Meeting in 2004 (P36.010) and 2005 (B17.00009). Most figures made uglier here to reduce file size. 2nd version: 19 pages, 9 figures. Much mathematical detail chopped away after hearing from journal referee; a few typos correcte

Interactions of Bacillus Mojavensis and Fusarium Verticillioides With a Benzoxazolinone (Boa) and Its Transformation Product, Apo

En:Journal of Chemical Ecology (2007, vol. 33, n. 10, p. 1885-1897)The benzoxazolinones, specifically benzoxazolin-2(3H)-one (BOA), are important transformation products of the benzoxazinones that can serve as allelochemicals providing resistance to maize from pathogenic bacteria, fungi, and insects. However, maize pathogens such as Fusarium verticillioides are capable of detoxifying the benzoxazolinones to 2-aminophenol (AP), which is converted to the less toxic N-(2-hydroxyphenyl) malonamic acid (HPMA) and 2-acetamidophenol (HPAA). As biocontrol strategies that utilize a species of endophytic bacterium, Bacillus mojavensis, are considered efficacious as a control of this Fusarium species, the in vitro transformation and effects of BOA on growth of this bacterium was examined relative to its interaction with strains of F. verticillioides. The results showed that a red pigment was produced and accumulated only on BOA-amended media when wild type and the progeny of genetic crosses of F. verticillioides are cultured in the presence of the bacterium. The pigment was identified as 2-amino-3H-phenoxazin-3-one (APO), which is a stable product. The results indicate that the bacterium interacts with the fungus preventing the usual transformation of AP to the nontoxic HPMA, resulting in the accumulation of higher amounts of APO than when the fungus is cultured alone. APO is highly toxic to F. verticillioides and other organisms. Thus, an enhanced biocontrol is suggested by this in vitro study. =580 $aEn:Journal of Chemical Ecolog

Evolution of the Dark Matter Distribution with 3-D Weak Lensing

We present a direct detection of the growth of large-scale structure, using weak gravitational lensing and photometric redshift data from the COMBO-17 survey. We use deep R-band imaging of two 0.25 square degree fields, affording shear estimates for over 52000 galaxies; we combine these with photometric redshift estimates from our 17 band survey, in order to obtain a 3-D shear field. We find theoretical models for evolving matter power spectra and correlation functions, and fit the corresponding shear correlation functions to the data as a function of redshift. We detect the evolution of the power at the 7.7 sigma level given minimal priors, and measure the rate of evolution for 0<z<1. We also fit correlation functions to our 3-D data as a function of cosmological parameters sigma_8 and Omega_Lambda. We find joint constraints on Omega_Lambda and sigma_8, demonstrating an improvement in accuracy by a factor of 2 over that available from 2D weak lensing for the same area.Comment: 11 pages, 4 figures; submitted to MNRA