Marine Strategy, una sfida ed un'opportunità per la Biologia Marina italiana

The Marine Strategy Framework Directive, which came into force in 2008, can be regarded as the environmental pillar for the Integrated European Maritime Policy. In the first phase of its implementation EU member Countries carried out an initial assessment of the ecological status, set environmental targets and defined the concept of Good Ecological Status. While marine biologists from Italian Universities and other research Institutions actively participated in this process, new challenges will be brought by its next phases, requiring a deeper involvement of the scientific community and a truly holistic approach

Collection and analysis of a global marine phytoplankton primary-production dataset

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Modeling Posidonia oceanica shoot density and rhizome primary production

Posidonia oceanicameadows rank among the most important and most productive ecosystems in the Mediterranean basin, due to their ecological role and to the goods and services they provide. estimations of crucial ecological process such as meadows productivity could play a major role in an environmental management perspective and in the assessment of P. oceanicaecosystem services. In this study, a Machine Learning approach, i.e. Random Forest, was aimed at modeling P. oceanica shoot density and rhizome primary production using as predictive variables only environmental factors retrieved from indirect measurements, such as maps. Our predictive models showed a good level of accuracy in modeling both shoot density and rhizome productivity (R 2 = 0.761 and R 2 = 0.736, respectively). Furthermore, as shoot density is an essential parameter in the estimation of P. oceanica productivity, we proposed a cascaded approach aimed at estimating the latter using predicted values of shoot density rather than observed measurements. In spite of the complexity of the problem, the cascaded Random forest performed quite well (R2 = 0.637). While direct measurements will always play a fundamental role, our estimates could support large scale assessment of the expected condition of P. oceanica meadows, providing valuable information about the way this crucial ecosystem works

Applications of Self-Organizing Maps for Ecomorphological Investigations through Early Ontogeny of Fish

We propose a new graphical approach to the analysis of multi-temporal morphological and ecological data concerning the life history of fish, which can typically serves models in ecomorphological investigations because they often undergo significant ontogenetic changes. These changes can be very complex and difficult to describe, so that visualization, abstraction and interpretation of the underlying relationships are often impeded. Therefore, classic ecomorphological analyses of covariation between morphology and ecology, performed by means of multivariate techniques, may result in non-exhaustive models. The Self Organizing map (SOM) is a new, effective approach for pursuing this aim. In this paper, lateral outlines of larval stages of gilthead sea bream (Sparus aurata) and dusky grouper (Epinephelus marginatus) were recorded and broken down using by means of Elliptic Fourier Analysis (EFA). Gut contents of the same specimens were also collected and analyzed. Then, shape and trophic habits data were examined by SOM, which allows both a powerful visualization of shape changes and an easy comparison with trophic habit data, via their superimposition onto the trained SOM. Thus, the SOM provides a direct visual approach for matching morphological and ecological changes during fish ontogenesis. This method could be used as a tool to extract and investigate relationships between shape and other sinecological or environmental variables, which cannot be taken into account simultaneously using conventional statistical methods

Long-term changes and recurrent patterns in fisheries landings from Large Marine Ecosystems (1950–2004)

The regional dynamics of industrial fisheries within Large Marine Ecosystems (LMEs) boundaries were investigated by means of a historical-descriptive approach. Landings data from the Sea Around Us Project database were used to detect trends in total yields and variations in landings composition by functional groups over time. The temporal and spatial scales covered by this study allowed general issues to be addressed such as the detection of recurrent patterns and synchronies in fisheries landings. An unsuper-vised artificial neural network, Self Organizing Map (SOM), is used as a tool to analyze fisheries landings composition variation over five decades in 51 LMEs all over the world. From the historical analysis of “fishing behaviors” within LMEs a broad distinction between two main types of fisheries emerged: (1) small and medium pelagics fisheries, with stable compositions or cyclic behaviors, occurred in LMEs which share common productive features, despite different geographical locations and (2) demersal fisheries, which are more affected by economic drivers and tend to concentrate in LMEs in the Northern Hemisphere. Our analysis can be regarded as a first step towards the challenging scope of describing the relative influence of environmental and economic drivers on exploited ecosystems

Optimizing interpolation of shoot density data from a Posidonia oceanica seagrass bed

A case study on the optimization of Posidonia oceanica density interpolation, using a data set from a large meadow at Porto Conte Bay (NW Sardinia, Italy), is presented. Ordinary point kriging, cokriging and a weighted average based on inverse square distance were used to interpolate density data measured in 36 sampling stations. The results obtained from different methods were then compared by means of a leave-one-out cross-validation procedure. The scale at which interpolation was carried out was defined on the basis of the Hausdorff dimension of the variogram. Optimizing spatial scale and data points search strategy allowed obtaining more accurate density estimates independently of the interpolation method