Widespread occurrence of Mycobacterium tuberculosis DNA from 18th-19th century Hungarians

A large number (265) of burials from 1731-1838 were discovered in sealed crypts of the Dominican Church, Vac, Hungary in 1994. Many bodies were naturally mummified, so that both soft tissues and bones were available. Contemporary archives enabled the determination of age at death, and the identification of family groups. In some cases, symptoms before death were described and, occasionally, occupation. Initial radiological examination of a small number of individuals had indicated calcified lung lesions and demonstrable acid-fast bacteria suggestive of tuberculosis infection. Tuberculosis was endemic in 18th-19th century Europe, so human remains should contain detectable Mycobacterium tuberculosis complex (MTB) DNA, enabling comparisons with modern isolates. Therefore, a comprehensive examination of 168 individuals for the presence of MTB DNA was undertaken. Specific DNA amplification methods for MTB showed that 55% of individuals were positive and that the incidence varied according to age at death and sampling site in the body. Radiographs were obtained from 27 individuals and revealed an association between gross pathology and the presence of MTB DNA. There was an inverse relationship between PCR positivity and MTB target sequence size. In some cases, the preservation of MTB DNA was excellent, and several target gene sequences could be detected from the same sample. This information, combined with MTB DNA sequencing data and molecular typing techniques, will enable us to study the past epidemiology of TB infection, and extends the timeframe for studying changes in molecular fingerprints. Am J Phys Anthropol 120:144-152, 2003. (C) 2003 Wiley-Liss, Inc

Asymptotic boundary forms for tight Gabor frames and lattice localization domains

We consider Gabor localization operators $G_{\phi,\Omega}$ defined by two parameters, the generating function $\phi$ of a tight Gabor frame $\{\phi_\lambda\}_{\lambda \in \Lambda}$, parametrized by the elements of a given lattice $\Lambda \subset \Bbb{R}^2$, i.e. a discrete cocompact subgroup of $\Bbb{R}^2$, and a lattice localization domain $\Omega \subset \Bbb{R}^2$ with its boundary consisting of line segments connecting points of $\Lambda$. We find an explicit formula for the boundary form $BF(\phi,\Omega)=\text{A}_\Lambda \lim_{R\rightarrow \infty}\frac{PF(G_{\phi,R\Omega})}{R}$, the normalized limit of the projection functional $PF(G_{\phi,\Omega})=\sum_{i=0}^{\infty}\lambda_i(G_{\phi,\Omega})(1-\lambda_i(G_{\phi,\Omega}))$, where $\lambda_i(G_{\phi,\Omega})$ are the eigenvalues of the localization operators $G_{\phi,\Omega}$ applied to dilated domains $R\Omega$, $R$ is an integer and $\text{A}_\Lambda$ is the area of the fundamental domain of the lattice $\Lambda$.Comment: 35 page

Optimális éves viselkedési modellek: út a fiziológiától a populációkig? = Optimal annual routines: a path from physiology to populations?

A pályázat fő célja annak kiderítése volt, hogy a különböző állapotváltozók hogyan befolyásolják az optimális viselkedést, speciálisan a hogyan befolyásolják a fő életmenet események időzítését az éves cikluson belül. E cél elérése érdekében több modellt fejlesztettünk, és változatos terepi megfigyeléseket és aviáriumi kísérleteket folytattunk. Fő modelljeink azt mutatják, hogy az állapotváltozók (pl. tollminőség, energiatartalékok) jelentősen befolyásolhatják a vedlés és vándorlás időzítését, de a táplálékforrás időbeli eloszlása és szezonalitása is jelentős hatással lehet. Fő empirikus eredményeink szerint a táplálék minősége és a paraziták fertőzése jelentősen befolyásolhatja a tollminőséget. Egy komparatív vizsgálatban kimutattuk, hogy a vándorlás időzítését a különféle életmenet jellemzők jelentősen befolyásolják, de a szexuálisan szelektált jellegeknek nincs ilyen hatása. | The main aim of the project was to investigate how state variables effect optimal behaviour in general, and the optimal timing of major life history events over the annual cycle, in particular. To accomplish this aim we developed a couple of annual routine models and performed various field observations and aviary experiments. Our main models show that state variables (quality of feathers, energy reserves) can significantly influence the timing of optimal behaviour (moult, migration) but they also underline the importance of the temporal distribution and seasonality of food sources. Our main empirical results show that diet quality and parasite infection influence feather quality considerably. By a comparative study we found that life history traits (e.g. migration distance and diet) but not sexually selected traits influence the timing of migration

Optimális vedlési stratégiák = Optimal moult strategies

A pályázat fő célja annak kiderítése volt, hogy a különböző állapotváltozók hogyan befolyásolják az optimális viselkedést, speciálisan a hogyan befolyásolják a fő életmenet események időzítését az éves cikluson belül. E cél elérése érdekében több modellt fejlesztettünk, és változatos terepi megfigyeléseket és aviáriumi kísérleteket folytattunk. Fő modelljeink azt mutatják, hogy az állapotváltozók (pl. tollminőség, energiatartalékok) jelentősen befolyásolhatják a vedlés és vándorlás időzítését, de a táplálékforrás időbeli eloszlása és szezonalitása is jelentős hatással lehet. Fő empirikus eredményeink szerint a táplálék minősége és a paraziták fertőzése jelentősen befolyásolhatja a tollminőséget. Egy komparatív vizsgálatban kimutattuk, hogy a vándorlás időzítését a különféle életmenet jellemzők jelentősen befolyásolják, de a szezuálisan szelektált jellegeknek nincs ilyen hatása. | The main aim of the project was to investigate how state variables effect optimal behaviour in general, and the optimal timing of major life history events over the annual cycle, in particular. To accomplish this aim we developed a couple of annual routine models and performed various field observations and aviary experiments. Our main models show that state variables (quality of feathers, energy reserves) can significantly influence the timing of optimal behaviour (moult, migration) but they also underline the importance of the temporal distribution and seasonality of food sources. Our main empirical results show that diet quality and parasite infection influence feather quality considerably. By a comparative study we found that life history traits (e.g. migration distance and diet) but not sexually selected traits influence the timing of migration

Enhancing quality of scoping reviews in paramedicine research : guidance for authors

Scoping reviews are an increasingly common method for conducting evidence synthesis in paramedicine. Over the past decade clear methodological guidance has emerged, adding rigour and credibility to this review approach. Paramedicine receives many scoping review submissions, and views these as valid evidence synthesis capable of helping the journal achieve its strategic vision and mission. However the Editorial Board has noted that submissions frequently fail to adhere to essential elements of scoping methodology and reporting standards. This editorial aims to provide guidance to authors regarding Paramedicine’s expectations and requirements for scoping review submissions, with the hope of contributing to a greater understanding of scoping review science and enhancement of quality

Detection and characterization of Mycobacterium tuberculosis DNA in 18th Century Hungarians with pulmonary and extra-pulmonary tuberculosis

Skeletal and naturally mummified tissues from a previously archived group of 18th century Hungarian remains were examined for the presence of Mycobacterium tuberculosis complex (MTB) DNA, using specific nested PCR for the IS6110 locus. Paleopathological changes in bones and from radiographs were noted in a minority of cases. Overall, specimens from 157/232 (67.7 %) of individuals proved positive, ranging from 20/43 (46.5 %) in children, 26/29 in middle-age (89.7 %) and 32/46 individuals aged 65-95 years (69.6 %). Single samples gave a positive result in 67/120 of cases (55.8 %). Most were ribs where the surface adjacent to lungs and pleura was sampled. When multiple sites were examined, 73/93 (78.5 %) individuals were positive; most of these had MTB only in the pulmonary region but 26 had disseminated disease (35.6 %) and 12 (16.4 %) had extra-pulmonary disease only. To distinguish M. tuberculosis from Mycobacterium bovis, well-preserved positive samples were examined for several additional genetic loci including the TbD1 deletion – characteristic of modern European strains of M. tuberculosis, and spoligotyped. No evidence other than of human M. tuberculosis was found, but different strains were detected. Tuberculosis was widespread in this community and whilst some individuals succumbed early in life, the majority co-existed with the infection. Therefore, this study may lead to the identification of host alleles and MTB strains associated with active and latent disease