329 research outputs found
On the nature of long-range contributions to pair interactions between charged colloids in two dimensions
We perform a detailed analysis of solutions of the inverse problem applied to
experimentally measured two-dimensional radial distribution functions for
highly charged latex dispersions. The experiments are carried out at high
colloidal densities and under low-salt conditions. At the highest studied
densities, the extracted effective pair potentials contain long-range
attractive part. At the same time, we find that for the best distribution
functions available the range of stability of the solutions is limited by the
nearest neighbour distance between the colloidal particles. Moreover, the
measured pair distribution functions can be explained by purely repulsive pair
potentials contained in the stable part of the solution.Comment: 6 pages, 5 figure
Monte Carlo simulation and global optimization without parameters
We propose a new ensemble for Monte Carlo simulations, in which each state is
assigned a statistical weight , where is the number of states with
smaller or equal energy. This ensemble has robust ergodicity properties and
gives significant weight to the ground state, making it effective for hard
optimization problems. It can be used to find free energies at all temperatures
and picks up aspects of critical behaviour (if present) without any parameter
tuning. We test it on the travelling salesperson problem, the Edwards-Anderson
spin glass and the triangular antiferromagnet.Comment: 10 pages with 3 Postscript figures, to appear in Phys. Rev. Lett
Temperature and density extrapolations in canonical ensemble Monte Carlo simulations
We show how to use the multiple histogram method to combine canonical
ensemble Monte Carlo simulations made at different temperatures and densities.
The method can be applied to study systems of particles with arbitrary
interaction potential and to compute the thermodynamic properties over a range
of temperatures and densities. The calculation of the Helmholtz free energy
relative to some thermodynamic reference state enables us to study phase
coexistence properties. We test the method on the Lennard-Jones fluids for
which many results are available.Comment: 5 pages, 3 figure
Attraction between DNA molecules mediated by multivalent ions
The effective force between two parallel DNA molecules is calculated as a
function of their mutual separation for different valencies of counter- and
salt ions and different salt concentrations. Computer simulations of the
primitive model are used and the shape of the DNA molecules is accurately
modelled using different geometrical shapes. We find that multivalent ions
induce a significant attraction between the DNA molecules whose strength can be
tuned by the averaged valency of the ions. The physical origin of the
attraction is traced back either to electrostatics or to entropic
contributions. For multivalent counter- and monovalent salt ions, we find a
salt-induced stabilization effect: the force is first attractive but gets
repulsive for increasing salt concentration. Furthermore, we show that the
multivalent-ion-induced attraction does not necessarily correlate with DNA
overcharging.Comment: 51 pages and 13 figure
Generalized-ensemble Monte carlo method for systems with rough energy landscape
We present a novel Monte Carlo algorithm which enhances equilibrization of
low-temperature simulations and allows sampling of configurations over a large
range of energies. The method is based on a non-Boltzmann probability weight
factor and is another version of the so-called generalized-ensemble techniques.
The effectiveness of the new approach is demonstrated for the system of a small
peptide, an example of the frustrated system with a rugged energy landscape.Comment: Latex; ps-files include
Grundstate Properties of the 3D Ising Spin Glass
We study zero--temperature properties of the 3d Edwards--Anderson Ising spin
glass on finite lattices up to size . Using multicanonical sampling we
generate large numbers of groundstate configurations in thermal equilibrium.
Finite size scaling with a zero--temperature scaling exponent describes the data well. Alternatively, a descriptions in terms of Parisi
mean field behaviour is still possible. The two scenarios give significantly
different predictions on lattices of size .Comment: LATEX 9pages,figures upon request ,SCRI-9
Coupled coarse graining and Markov Chain Monte Carlo for lattice systems
We propose an efficient Markov Chain Monte Carlo method for sampling
equilibrium distributions for stochastic lattice models, capable of handling
correctly long and short-range particle interactions. The proposed method is a
Metropolis-type algorithm with the proposal probability transition matrix based
on the coarse-grained approximating measures introduced in a series of works of
M. Katsoulakis, A. Majda, D. Vlachos and P. Plechac, L. Rey-Bellet and
D.Tsagkarogiannis,. We prove that the proposed algorithm reduces the
computational cost due to energy differences and has comparable mixing
properties with the classical microscopic Metropolis algorithm, controlled by
the level of coarsening and reconstruction procedure. The properties and
effectiveness of the algorithm are demonstrated with an exactly solvable
example of a one dimensional Ising-type model, comparing efficiency of the
single spin-flip Metropolis dynamics and the proposed coupled Metropolis
algorithm.Comment: 20 pages, 4 figure
The interplay between shell effects and electron correlations in quantum dots
We use the Path Integral Monte Carlo method to investigate the interplay
between shell effects and electron correlations in single quantum dots with up
to 12 electrons. By use of an energy estimator based on the hypervirial theorem
of Hirschfelder we study the energy contributions of different interaction
terms in detail. We discuss under which conditions the total spin of the
electrons is given by Hund's rule, and the temperature dependence of the
crystallization effects.Comment: 6 pages, 4 figure
Multicanonical Recursions
The problem of calculating multicanonical parameters recursively is
discussed. I describe in detail a computational implementation which has worked
reasonably well in practice.Comment: 23 pages, latex, 4 postscript figures included (uuencoded
Z-compressed .tar file created by uufiles), figure file corrected
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