Agrupamento de ingredientes com composição de aminoácidos similar à exigência nutricional da tilápia do Nilo

A busca de uma ração balanceada, que proporcione maior crescimento aos peixes, passa pela escolha adequada das fontes protéicas disponíveis. Este estudo teve por objetivo agrupar alimentos de acordo com o perfil de aminoácidos essenciais, determinando quais mostram perfis mais próximos do requerimento da tilápia do Nilo (Oreochromis niloticus), e estudar a relação entre os aminoácidos dentro dos agrupamentos obtidos. Foram utilizadas composições de aminoácidos em relação ao conteúdo de lisina, de 40 alimentos comumente utilizados como ingredientes na formulação de dietas para peixes. Os ingredientes foram agrupados de acordo com o perfil de aminoácidos utilizando a análise de agrupamento por meio da distância Euclidiana, enquanto a análise de componentes principais foi utilizada para determinar a relação entre os aminoácidos em cada grupo obtido. Três grupos de ingredientes foram formados e apenas dois ingredientes, sorgo baixo tanino e farelo de glúten de milho 60%, não entraram em nenhum dos três grupos. A exigência de aminoácidos da tilápia do Nilo foi semelhante ao perfil de aminoácidos encontrado em 22 alimentos. A análise de componentes principais conseguiu resumir e explicar 75% da variância total com apenas três componentes principais. Até que maiores informações sobre a disponibilidade de aminoácidos de diferentes ingredientes sejam obtidas, o perfil total de aminoácidos continuará a ser uma informação valiosa na escolha dos ingredientes a serem utilizados na formulação e processamento de alimentos para tilápia do Nilo.The search for balanced diets, which may elicit improved growth of fish, requires appropriate selection of available protein sources. This study aims at clustering feedstuffs according to amino acid profile, determining which ones show essential amino acids (EAA) profiles closer to the ideal dietary amino acids requirements of Nile tilapia (Oreochromis niloticus), and studying the relationship among amino acids feedstuffs groups. Tabled data on EAA more cystine and tyrosine, in relation to lysine contents, of 40 feedstuffs ordinarily used to formulate fish diets were studied. Feedstuffs were grouped according to amino acids profile by cluster analysis of Euclidean distances. The principal components analysis was used to determine the relationship among amino acids in each feedstuff group. Three groups of ingredients were parted and two ingredients, low tannin sorghum and corn gluten meal 60%, did not go with any group. Dietary amino acids requirements of Nile tilapia were similar to the amino acid profile of 22 feedstuffs. The principal component analysis explained with three principal components more than 75% of total variance of amino acids in three feedstuff groups. Therefore, until additional, detailed information on amino acids availability of different ingredients is consolidated, total amino acids profiles will continue to be important information to select and use conventional or surrogate ingredients for formulating and processing feeds for tilapia

IDE-OTALEX C. The big challenge of the first Crossborder SDI between Spain and Portugal

The SDI implementation is an average difficult work. There should be an understanding between political and scientific interests, technological advances and it is also quite recommended to meet the needs of citizens. A cross-border SDI implementation, where three levels of administration belonging to two countries must be considered, may seem impossible to do, but it is not only a possible task, but also an enriching and useful task to study the reality of the territory and its sustainable development. IDE OTALEXC is the first crossborder spatial data infrastructure characterized for being a distributed, decentralized, modular and collaborative system, based on standards OGC (Open Geospatial Consortium), W3C (World Wide Web Consortium), ISO (International Organization for Standardization) and open source technology

Evaluation of genotype by environment interactions on milk production traits of Holstein cows in southern Brazil

Objective This study assessed the possible existence of genotype by environment interactions for milk, fat and protein yields in Holstein cattle raised in one of the most important milk production basins in Brazil. Methods Changes in the genetic parameters and breeding values were evaluated for 57,967 animals from three distinct regions of southern Brazil, divided according to differences in climate. The genotype by environment interaction was determined by genetic correlations between regions, estimated by the restricted maximum likelihood, considering the animal model. Bull rankings were investigated to verify the ratio of coincident selected animals between regions for each trait. Results The estimates of heritability coefficients were similar between two regions, but were lower in the third evaluated area, for all traits. Genetic correlations between regions were high, ranging from 0.91 to 0.99 for milk, fat and protein yields, representing the absence of a genotype by environment interaction for productive traits. The percentage of selection error between regions for the top 10% of animals ranged from 0.88% to 2.07% for milk yield, 0.99% to 2.46% for fat yield and 0.59% to 3.15% for protein yield. Conclusion A slight change in genotype between areas was expected since no significant genotype by environment interactions were identified, facilitating the process of selecting Holstein cattle in southern Brazil

Polimorfismos nos genes MyoD1, MyoG, MyF5, MyF6 e MSTN em ovinos Santa Inês

The objective of this work was to sequence the MyoD1, MyoG, MyF5, MyF6, and MSTN genes and to identify polymorphisms in Santa Inês sheep (Ovis aries). A total of 192 lambs with 240 days of age were evaluated, and these genes were sequenced to be compared with the reference sequence in the Ovis aries genome. Genotype and allele frequencies were estimated, and the Hardy-Weinberg equilibrium was tested. Fragments containing 2,493 bp (MyoD1), 1,836 bp (MyoG), 2,813 bp (MyF5), 1,126 bp (MyF6), and 2,380 bp (MSTN) were obtained, and, in these sequences, 160 variants were identified. These polymorphisms were distributed as follows: 59 (MyoD1), 24 (MyoG), 63 (MyF5), 4 (MyF6), and 10 (MSTN). One hundred and four were novel polymorphisms, 45 in MyoD1, 2 in MyoG, 56 in MyF5, and 1 in MSTN. Regarding site, 61 were in intron (27 in MyoD1, 16 in MyoG, 5 in MyF5, 3 in MyF6, and 10 in MSTN), 87 in coding region (22 in MyoD1, 8 in MyoG, 56 in MyF5, and 1 in MyF6), and 12 on 3’UTR (10 in MyoD1 and 2 in MyF5). Therefore, the MyoD family and MSTN genes have several polymorphisms in Santa Inês sheep, which can be useful for association studies.O objetivo deste trabalho foi sequenciar os genes MyoD1, MyoG, MyF5, MyF6 e MSTN e identificar polimorfismos em ovinos Santa Inês (Ovis aries). No total, 192 cordeiros com 240 dias de idade foram avaliados, e estes genes foram sequenciados para comparação com a sequência-referência no genoma de Ovis aries. As frequências genotípicas e alélicas foram estimadas, e o equilíbrio de Hardy-Weinberg, testado. Foram obtidos fragmentos contendo 2.493 pb (MyoDl), 1.836 pb (MyoG), 2.813 pb (MyF5), 1.126 pb (MyF6) e 2.380 pb (MSTN), e, nessas sequências, foram identificadas 160 variantes. Esses polimorfismos foram distribuídos da seguinte forma: 59 (MyoD1), 24 (MyoG), 63 (MyF5), 4 (MyF6) e 10 (MSTN). Foram encontrados 104 novos polimorfismos, sendo 45 no MyoD1, 2 no MyoG, 56 no MyF5 e 1 no MSTN. Com relação ao local, 61 variantes estavam em íntron (27 no MyoD1, 16 no MyoG, 5 no MyF5, 3 no MyF6 e 10 no MSTN), 87 em região codificante (22 no MyoD1, 8 no MyoG, 56 no MyF5 e 1 no MyF6) e 12 na região 3’UTR (10 no MyoD1 e 2 no MyF5). Portanto, os genes da família MyoD e o MSTN possuem vários polimorfismos em ovinos da raça Santa Inês, os quais podem ser úteis em estudos de associação

Linkage disequilibrium in Brazilian Santa Inês breed, \u3ci\u3eOvis aries\u3c/i\u3e

For genomic selection to be successful, there must be sufficient linkage disequilibrium between the markers and the causal mutations. The objectives of this study were to evaluate the extent of LD in ovine using the Santa Inês breed and to infer the minimum number of markers required to reach reasonable prediction accuracy. In total, 38,168 SNPs and 395 samples were used. The mean LD between adjacent marker pairs measured by r2 and |D′| were 0.166 and 0.617, respectively. LD values between adjacent marker pairs ranged from 0.135 to 0.194 and from 0.568 to 0.650 for r2 for |D′| across all chromosomes. The average r2 between all pairwise SNPs on each chromosome was 0.018. SNPs separated by between 0.10 to 0.20 Mb had an estimated average r2 equal to 0.1033. The identified haplotype blocks consisted of 2 to 21 markers. Moreover, estimates of average coefficients of inbreeding and effective population size were 0.04 and 96, respectively. LD estimated in this study was lower than that reported in other species and was characterized by short haplotype blocks. Our results suggest that the use of a higher density SNP panel is recommended for the implementation of genomic selection in the Santa Inês breed

OTALEX-C, BASIS FOR OPPORTUNITIES OF NEW RESEARCH PROJECTS AND DEVELOPMENTS. GENERAL STUDIES: THE EURO-CITY ELVAS-BADAJOZ

La civilización es una realidad evolutiva continua que fomenta la reformulación de las metodologías de planificación y la ordenación del territorio para adaptar los viejos métodos a las necesidades actuales. Requiere una presencia ineludible del proceso empírico, con herramientas e indicadores que pueden, en la gestión territorial y la intervención local, contribuir a la implementación de la sostenibilidad creciente y el desarrollo funcional. Este trabajo, además de detallar el alcance global del proyecto, pone de relieve las metodologías utilizadas para la identificación y análisis de áreas territoriales específicas y también contempla el nuevo marco de investigación y las oportunidades de desarrollo creadas por el Proyecto OTALEX-C. Enmarcado dentro del ambito de la region EuroACE y del Proyecto OTALEX-C, un estudio de caso relacionado con la Eurociudad de Elvas-Badajoz será analizado y evaluado. Un protocolo establecido en 2013 entre las ciudades de Elvas y Badajoz conducio a la creación de la Euro-ciudad. Sin embargo, tres años más tarde, varias cuestiones muestran poca claridad. A este respecto, la identificación, el análisis y la evaluación de los factores que pueden influir en el éxito territorial en las zonas transfronterizas se consideran fundamentales para lograr un desarrollo sostenible mediante proyectos y estrategias de cooperación transfronteriza, lo que conduce a una mejora de las normas de vida de los habitantes transfronterizos. Hoy en día, la investigación muestra que los efectos e impactos que los proyectos de CBC representan en la región no son visibles. Las regiones europeas donde se han encontrado similitudes pueden verse como un paso más en el que se pueden aplicar descripciones y métodos idénticos. Algunas de estas soluciones pueden encontrarse en el Proyecto de CBC de Elvas-Badajoz

OBSERVATORIO TERRITORIAL Y AMBIENTAL ALENTEJO, EXTREMADURA, CENTRO (OTALEX C): DE GIS A IDE.

In the scope of the Spain-Portugal INTERREG projects and FEDER funded POCTEP program, OTALEX C (Territorial and Environmental Monitoring Alentejo Extremadura Center) project aims at studying of various territorial, socioeconomic and environmental indicators. It is the fundamental objective of this project, to develop a geo-portal accessible via internet, for anyone, so that the information will be useful in making decisions related to land use and therefore sustainable development of the environment. Under this general framework over the past fifteen years, we have developed different projects that have set the standardization of data between Portugal and Spain, also was designed GIS systems, and developed regional models and indicator systems, culminating in the current Spatial Data Infrastructure SDI-OTALEX C

IDE-OTALEX C - primeira IIG transfronteiriça: desenvolvimento, desafios e sustentabilidade.

O Projecto OTALEX foi financiado pelo programa europeu INTERREG IIIA e teve como objectivos estudar e dar a conhecer a realidade de um território, composto pelas regiões do Alentejo em Portugal e da Extremadura em Espanha, separadas convencionalmente pela fronteira administrativa mas unidas pelas suas características físicas, ambientais, sociais e económicas. Tratam-se de espaços rurais de baixa densidade demográfica onde os recursos naturais, culturais e a qualidade do ambiente constituem os seus atractivos fundamentais. A IDE OTALEX é o resultado do esforço, do compromisso e da colaboração entre instituições da fronteira, com implicação aos três níveis administrativos: Nacional, Regional e Local. Apresentam-se os trabalhos de homogeneização e estandartização de dados territoriais do Alentejo e da Extremadura, através de clientes de visualização de mapas, consulta de topónimos e de catálogo, no âmbito da directiva INSPIRE.info:eu-repo/semantics/publishedVersio

Energy Estimation of Cosmic Rays with the Engineering Radio Array of the Pierre Auger Observatory

The Auger Engineering Radio Array (AERA) is part of the Pierre Auger Observatory and is used to detect the radio emission of cosmic-ray air showers. These observations are compared to the data of the surface detector stations of the Observatory, which provide well-calibrated information on the cosmic-ray energies and arrival directions. The response of the radio stations in the 30 to 80 MHz regime has been thoroughly calibrated to enable the reconstruction of the incoming electric field. For the latter, the energy deposit per area is determined from the radio pulses at each observer position and is interpolated using a two-dimensional function that takes into account signal asymmetries due to interference between the geomagnetic and charge-excess emission components. The spatial integral over the signal distribution gives a direct measurement of the energy transferred from the primary cosmic ray into radio emission in the AERA frequency range. We measure 15.8 MeV of radiation energy for a 1 EeV air shower arriving perpendicularly to the geomagnetic field. This radiation energy -- corrected for geometrical effects -- is used as a cosmic-ray energy estimator. Performing an absolute energy calibration against the surface-detector information, we observe that this radio-energy estimator scales quadratically with the cosmic-ray energy as expected for coherent emission. We find an energy resolution of the radio reconstruction of 22% for the data set and 17% for a high-quality subset containing only events with at least five radio stations with signal.Comment: Replaced with published version. Added journal reference and DO