Postrelease exploration and diel activity of hatchery, wild, and hybrid strain brown trout in seminatural streams

Behaviour that is adaptive in captivity may be maladaptive in the wild and compromise postrelease survival of hatchery fish. The understanding of behavioural variation displayed immediately after release could help to improve hatchery protocols and development of behavioural tests for assessing the fitness of fish reared for releases. We characterized the postrelease behaviour of common-garden-raised offspring of wild resident, captive-bred migratory, and hybrid brown trout (Salmo trutta) in two experiments: in small artificial channels and in high and low densities in seminatural streams. The results from seminatural streams showed that hatchery fish were more likely to disperse downstream from the initial stocking site compared with hybrid and wild strain fish. The small-scale experiment did not reveal this ecologically pivotal difference in postrelease performance among strains, and individual responses were inconsistent between the experiments. Circadian activity patterns did not differ among strains. These detailed observations of postrelease behaviour reveal important intrinsic differences in dispersal traits among brown trout strains and suggest that selective breeding and crossbreeding can substantially affect these traits.Peer reviewe

Fishing-induced versus natural selection in different brown trout (Salmo trutta) strains

Wild, adfluvial brown trout (Salmo trutta) are iconic targets in recreational fisheries but also endangered in many native locations. We compared how fishing and natural selection affect the fitness-proxies of brown trout from two pure angling-selected strains and experimental crosses between an adfluvial, hatchery-bred strain and three wild, resident strains. We exposed age 1+ parr to predation risk under controlled conditions where their behaviour was monitored with PIT-telemetry, and stocked age 2+ fish in two natural lakes for experimental fishing. Predation mortality (16% of the fish) was negatively size-dependent, while capture probability, also reflecting survival, in the lakes (38.9% of the fish) was positively length- and condition- dependent. Angling-induced selection against low boldness and slow growth rates relative to gillnet fishing indicated gear-dependent potential for fisheries-induced evolution in behaviours and life-histories. Offspring of wild, resident fish showed slower growth rates than the crossbred strains. Strain effects suggested significant heritable scope for artificial selection on life-history traits and demonstrated that choices of fish supplementation by stocking may override the genetic effects induced by angling.Peer reviewe

Comparing RADseq and microsatellites for estimating genetic diversity and relatedness - Implications for brown trout conservation

The conservation and management of endangered species requires information on their genetic diversity, relatedness and population structure. The main genetic markers applied for these questions are microsatellites and single nucleotide polymorphisms (SNPs), the latter of which remain the more resource demanding approach in most cases. Here, we compare the performance of two approaches, SNPs obtained by restriction-site-associated DNA sequencing (RADseq) and 16 DNA microsatellite loci, for estimating genetic diversity, relatedness and genetic differentiation of three, small, geographically close wild brown trout (Salmo trutta) populations and a regionally used hatchery strain. The genetic differentiation, quantified as F-ST, was similar when measured using 16 microsatellites and 4,876 SNPs. Based on both marker types, each brown trout population represented a distinct gene pool with a low level of interbreeding. Analysis of SNPs identified half- and full-siblings with a higher probability than the analysis based on microsatellites, and SNPs outperformed microsatellites in estimating individual-level multilocus heterozygosity. Overall, the results indicated that moderately polymorphic microsatellites and SNPs from RADseq agreed on estimates of population genetic structure in moderately diverged, small populations, but RADseq outperformed microsatellites for applications that required individual-level genotype information, such as quantifying relatedness and individual-level heterozygosity. The results can be applied to other small populations with low or moderate levels of genetic diversity.Peer reviewe

Does parental angling selection affect the behavior or metabolism of brown trout parr?

The behavior of organisms can be subject to human-induced selection such as that arising from fishing. Angling is expected to induce mortality on fish with bold and explorative behavior, which are behaviors commonly linked to a high standard metabolic rate. We studied the transgenerational response of brown trout (Salmo trutta) to angling-induced selection by examining the behavior and metabolism of 1-year-old parr between parents that were or were not captured by experimental fly fishing. We performed the angling selection experiment on both a wild and a captive population, and compared the offspring for standard metabolic rate and behavior under predation risk in common garden conditions. Angling had population-specific effects on risk taking and exploration tendency, but no effects on standard metabolic rate. Our study adds to the evidence that angling can induce transgenerational responses on fish personality. However, understanding the mechanisms of divergent responses between the populations requires further study on the selectivity of angling in various conditions

Redefinition of the biogeographical areas of the freshwater fishes in the Guiana Shield with a study of the dispersal processes of 3 genera of the Heptapteridae, (Pisces: Siluriformes)

The Guiana Shield is located in North-Eastern South America. The river system of the Atlantic slope of the Shield is composed of non-interconnected rivers. Although some connections exist, its freshwater ichtyofauna is in great part different from the Amazon basin one. In this study, we investigated the faunistic assemblage of the Guiana shield’s river system. We redefined the map of the freshwater biogeographic areas of the northern Guiana Shield. We first excluded the Essequibo from the Guyana Shield system and assiocated it with the Amazonian fauna. In the Guyanas, we observed 3 regions: one in the west (Corantijn to Suriname), one in the East (Sinnamary to Oyapock) and one in the centre (Commewijne to Mana). In a second stage, we reconstructed the process of dispersion through these biogeographical areas. We studied genera of the Heptapteridae (Rhamdia, Chasmocranus and Pimelodella) using molecular data. We observed that these genera dispersed differently within the system: results indicated that Rhamdia and Pimelodella could overcome natural barriers and spread easier while Chasmocranus seemed more restricted

From scales to armor: Scale losses and trunk bony plate gains in ray‐finned fishes

Abstract Actinopterygians (ray‐finned fishes) are the most diversified group of vertebrates and are characterized by a variety of protective structures covering their integument, the evolution of which has intrigued biologists for decades. Paleontological records showed that the first mineralized vertebrate skeleton was composed of dermal bony plates covering the body, including odontogenic and skeletogenic components. Later in evolution, the exoskeleton of actinopterygian's trunk was composed of scale structures. Although scales are nowadays a widespread integument cover, some contemporary lineages do not have scales but bony plates covering their trunk, whereas other lineages are devoid of any such structures. To understand the evolution of the integument coverage and particularly the transition between different structures, we investigated the pattern of scale loss events along with actinopterygian evolution and addressed the functional relationship between the scaleless phenotype and the ecology of fishes. Furthermore, we examined whether the emergence of trunk bony plates was dependent over the presence or absence of scales. To this aim, we used two recently published actinopterygian phylogenies, one including >11,600 species, and by using stochastic mapping and Bayesian methods, we inferred scale loss events and trunk bony plate acquisitions. Our results reveal that a scaled integument is the most frequent state in actinopterygians, but multiple independent scale loss events occurred along their phylogeny with essentially no scale re‐acquisition. Based on linear mixed models, we found evidence supporting that after a scale loss event, fishes tend to change their ecology and adopt a benthic lifestyle. Furthermore, we show that trunk bony plates appeared independently multiple times along the phylogeny. By using fitted likelihood models for character evolution, we show that trunk bony plate acquisitions were dependent on a previous scale loss event. Overall, our findings support the hypothesis that integument cover is a key evolutionary trait underlying actinopterygian radiation

Does parental angling selection affect the behavior or metabolism of brown trout parr?

The behavior of organisms can be subject to human-induced selection such as that arising from fishing. Angling is expected to induce mortality on fish with bold and explorative behavior, which are behaviors commonly linked to a high standard metabolic rate. We studied the transgenerational response of brown trout (Salmo trutta) to angling-induced selection by examining the behavior and metabolism of 1-year-old parr between parents that were or were not captured by experimental fly fishing. We performed the angling selection experiment on both a wild and a captive population, and compared the offspring for standard metabolic rate and behavior under predation risk in common garden conditions. Angling had population-specific effects on risk taking and exploration tendency, but no effects on standard metabolic rate. Our study adds to the evidence that angling can induce transgenerational responses on fish personality. However, understanding the mechanisms of divergent responses between the populations requires further study on the selectivity of angling in various conditions.Peer reviewe

RADSeq genetics of resident and migratory brown trout within and among rivers

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Comparison of Migratory and Resident Populations of Brown Trout Reveals Candidate Genes for Migration Tendency

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